Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H03_e24_15.seq
(1453 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_07_0003 - 27182551-27183054 39 0.009
09_02_0278 + 6691685-6692188 39 0.009
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.74
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 32 0.98
10_08_0399 - 17614585-17614809,17614860-17615168 32 1.3
07_01_0479 + 3606663-3607448 31 1.7
08_01_0059 - 394001-394708 31 2.3
06_03_1310 + 29238644-29240260 31 3.0
04_03_0904 + 20717005-20718087 31 3.0
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 31 3.0
01_01_0070 - 542603-542686,542803-543441 31 3.0
12_02_1174 - 26696869-26698191 30 4.0
09_02_0543 + 10427321-10428315,10428440-10429154 30 4.0
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 4.0
06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797 30 5.2
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 6.9
06_03_0178 + 17594062-17595576 29 6.9
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 6.9
03_01_0515 - 3864796-3865425 29 6.9
12_02_0299 - 17051570-17052474,17053542-17053755 29 9.1
11_06_0610 - 25449085-25453284 29 9.1
10_08_0222 - 15983756-15984313 29 9.1
09_06_0081 + 20745627-20748144,20748211-20748308 29 9.1
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 29 9.1
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 29 9.1
>11_07_0003 - 27182551-27183054
Length = 167
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/83 (24%), Positives = 22/83 (26%)
Frame = -2
Query: 1365 GXGXPGXGXXGAGXGXXGXWXXAGXXXPXXXKXXXXRGGPXGXXXXXAXRXGXPXXRXRX 1186
G G G+ G G P + G P G R G P
Sbjct: 40 GRSSGGSSSSGSSSGGSSTRSPVGSASPSSGRNPATTGSPGGVRSPATARAGSPGGGTGT 99
Query: 1185 XXEGGGXPXGGASXXXGXXXXXG 1117
G G P GG S G G
Sbjct: 100 TLAGAGSPGGGRSPVGGGTIPAG 122
>09_02_0278 + 6691685-6692188
Length = 167
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/83 (24%), Positives = 22/83 (26%)
Frame = -2
Query: 1365 GXGXPGXGXXGAGXGXXGXWXXAGXXXPXXXKXXXXRGGPXGXXXXXAXRXGXPXXRXRX 1186
G G G+ G G P + G P G R G P
Sbjct: 40 GRSSGGSSSSGSSSGGSSTRSPVGSASPSSGRNPATTGSPGGVRSPATARAGSPGGGTGT 99
Query: 1185 XXEGGGXPXGGASXXXGXXXXXG 1117
G G P GG S G G
Sbjct: 100 TLAGAGSPGGGRSPVGGGTIPAG 122
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.74
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 1069 GXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXP 1218
G P++ G+ R P P PP P P P A P ++ P
Sbjct: 21 GVAPLAAAQGQNIQTRFPSTRTPAFATPPPITSPSPSPGTPTATPSSSPP 70
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/69 (27%), Positives = 24/69 (34%)
Frame = +1
Query: 1030 PXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRA 1209
P P + P + + L PGR SP R P + P PPP A P
Sbjct: 271 PSPAPAPAARPASPSPSLPLPPGRESPSR--PQSIAAAAVASPAPPPPPPPKPAAAAPPP 328
Query: 1210 TXPGRXXXP 1236
P + P
Sbjct: 329 PPPPKAAPP 337
Score = 31.1 bits (67), Expect = 2.3
Identities = 28/129 (21%), Positives = 36/129 (27%)
Frame = +2
Query: 980 PXXXPPAXNXFFLXXASPXPEKXXXRSXTTAGXRFPSARGGKARSXPXXLXXPXFXEAPP 1159
P P + +SP P + P G ++ S P + P
Sbjct: 254 PPSTPAITAVSSVPRSSPSPAPAPAARPASPSPSLPLPPGRESPSRPQSIAAAAVASPAP 313
Query: 1160 XGXPPPSXXXLXRCXGXPXRXAXXXXXPXGPPRXXXFXXXWGXHXPAXXQXPXXPSPAPX 1339
PPP P + A P GPP G P + P P P P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPP---PPAKGPPPPPPPKGPSPPPPPPP 370
Query: 1340 XPXPGXPXP 1366
G P P
Sbjct: 371 GGKKGGPPP 379
Score = 29.5 bits (63), Expect = 6.9
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Frame = +3
Query: 912 PXRHXFXXPPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAP-----XQRXG 1076
P + PP P PP AP P K P P PPP + P ++ G
Sbjct: 318 PPKPAAAAPP-PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Query: 1077 PDFPLP--GEXKPEAXP 1121
P P P G +P A P
Sbjct: 377 PPPPPPKGGASRPPAAP 393
>03_02_0758 + 10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 32.3 bits (70), Expect = 0.98
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = -3
Query: 1205 RGXAKGXKXKGGGXPXGGLXXXXGXXXG--GVRFGLXLPGQREIGXXPLXGSEXXXSPGX 1032
+G K K KGGG GG G G GV FGL + E G P S S
Sbjct: 603 KGGKKSGKGKGGGGGGGGGSGARGRGRGVRGVDFGLGIGYNAESGSVPAPRSAALNSLKT 662
Query: 1031 G 1029
G
Sbjct: 663 G 663
>10_08_0399 - 17614585-17614809,17614860-17615168
Length = 177
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -3
Query: 1220 PGXVARGXAKGXKXKGGGXPXGGLXXXXGXXXGGVRFGLXLPGQR 1086
P VA +KG K K GG G G GG LPG+R
Sbjct: 62 PTHVAVASSKGGKGKRGGGGGAGAREGGGGGGGGAVAAASLPGER 106
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.5 bits (68), Expect = 1.7
Identities = 26/96 (27%), Positives = 29/96 (30%), Gaps = 3/96 (3%)
Frame = +1
Query: 976 PPXXNXXXPEXFFFXPXLPXPGEXXXSL-PXNGXXPISLCPG--RXSPKRTPPXXXPXXX 1146
PP N P + P PG+ + P P PG P PP P
Sbjct: 151 PPMPNLSAPPVAYPQVVRPPPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPFMR 210
Query: 1147 XSPPXGXPPPFXXXPXAXPRATXPGRXXXPTSXGXP 1254
PP G P P P PG P G P
Sbjct: 211 GPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMP 246
>08_01_0059 - 394001-394708
Length = 235
Score = 31.1 bits (67), Expect = 2.3
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPEA 1115
PP PP P P P + P + P PPP R AP P P P P A
Sbjct: 6 PPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPR--PYAPPPPSHPLAPPPPHISPPA 63
>06_03_1310 + 29238644-29240260
Length = 538
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXPGRXXXPTSXG 1248
P P+RTPP P +P PPP P+++ P P+S G
Sbjct: 386 PHHMPPRRTPPTPPPPSSPTPSHLPPPP--PTYSESPKSSMPPSTSPPSSHG 435
>04_03_0904 + 20717005-20718087
Length = 360
Score = 30.7 bits (66), Expect = 3.0
Identities = 22/87 (25%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Frame = +1
Query: 967 PXFPPXXNXXXPEXFFFXPX-LPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXX 1143
P + P P + P P P + P + P + P PK TPP P
Sbjct: 71 PAYTPPKPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPTYKPQP 130
Query: 1144 XXSP----PXGXPPPFXXXPXAXPRAT 1212
+P P PP + P P T
Sbjct: 131 KPTPAPYTPTPTPPTYKPQPKPTPPPT 157
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 30.7 bits (66), Expect = 3.0
Identities = 20/75 (26%), Positives = 24/75 (32%)
Frame = +1
Query: 1036 PGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATX 1215
P S P + P PG P +PP P + G P + P A
Sbjct: 1137 PSSTSSSPPSSQSPP----PGSSPPPASPPPSTPSAPPTNSSGSAPSPPSPSQSAPPANT 1192
Query: 1216 PGRXXXPTSXGXPXA 1260
G P S G P A
Sbjct: 1193 GGGGSPPPSHGSPPA 1207
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXS--PPXGXPPPFXXXPX 1194
P P P P P + P P PP P + PP PPP P
Sbjct: 94 PVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPPVAAPAEAPAALPPATTPPPVAEAPA 153
Query: 1195 AXPRATXP 1218
P A P
Sbjct: 154 ELPPAEAP 161
Score = 29.9 bits (64), Expect = 5.2
Identities = 17/63 (26%), Positives = 21/63 (33%)
Frame = +1
Query: 1030 PXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRA 1209
P P P + P +PK+ PP +PP PPP P P A
Sbjct: 61 PTPPVAPAKAPPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPPATPPPA 120
Query: 1210 TXP 1218
P
Sbjct: 121 LPP 123
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 4.0
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPEA 1115
PP P PP P P P K P P PPP + P P P +P+
Sbjct: 154 PPPPPPPPPPPPRPPSVK---PPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKP 210
Query: 1116 XPXXXXP 1136
P P
Sbjct: 211 QPPPTLP 217
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 30.3 bits (65), Expect = 4.0
Identities = 20/78 (25%), Positives = 24/78 (30%)
Frame = +3
Query: 912 PXRHXFXXPPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPL 1091
P + PP P P P P+ + P PPP +P PD
Sbjct: 7 PIQQDSPAPPRPTPAPQATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTP 66
Query: 1092 PGEXKPEAXPXXXXPXXS 1145
P P A P P S
Sbjct: 67 PPGPGPAAAPSPHSPSPS 84
>07_03_0792 - 21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.3 bits (65), Expect = 4.0
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = +3
Query: 936 PPIP---XPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQR-XGPDFPLP 1094
PPIP PP P AP P P P PPP + P + GP P P
Sbjct: 561 PPIPKLLSPPAPQAPMPPLKASPVPPP---EPSPPPAPKAAPPPPPPKSTGPGPPRP 614
>06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797
Length = 216
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/67 (31%), Positives = 25/67 (37%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P + P G P S+ P +P P +P G PPP P A
Sbjct: 65 PALPAPLPPTPASP--GDSPPSIAPA-GNPPTPAQAGAPPPSIAPGTGSPPPATTTPPA- 120
Query: 1201 PRATXPG 1221
P A G
Sbjct: 121 PGAREAG 127
>07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.5 bits (63), Expect = 6.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKP 1109
PP+P PP P P P+ P PPP + P Q P P P +P
Sbjct: 227 PPLPPPPPP-PPKPANIAGAPGLPLPPPPPPPPGPPPREIVPGQTLLPPPPPPRPLQP 283
>06_03_0178 + 17594062-17595576
Length = 504
Score = 29.5 bits (63), Expect = 6.9
Identities = 12/48 (25%), Positives = 12/48 (25%)
Frame = +2
Query: 1295 PAXXQXPXXPSPAPXXPXPGXPXPXXXXLXXXXXXXXXXAXXXAXXPR 1438
P PSPAP P P P P A R
Sbjct: 5 PGHSPRHLSPSPAPSTPRPSSPTPSSASASASASALAAAATTTTSSKR 52
>03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.5 bits (63), Expect = 6.9
Identities = 18/66 (27%), Positives = 21/66 (31%)
Frame = +3
Query: 912 PXRHXFXXPPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPL 1091
P + + P+P PP P P P PPP R AP P P
Sbjct: 33 PQQRGYAQMPMPGPPSQPPP-PQAMYQAHPQYPMPGSLPPPPPRPPSFAPENALPPSSPP 91
Query: 1092 PGEXKP 1109
P P
Sbjct: 92 PPSPPP 97
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.5 bits (63), Expect = 6.9
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKX-XXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPE 1112
PP P P AP PS P P PPP P P P P P
Sbjct: 42 PPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPP 101
Query: 1113 AXPXXXXP 1136
P P
Sbjct: 102 PPPSPPPP 109
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 939 PIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPP 1034
P P PP P AP P+ P F P PPP
Sbjct: 261 PFPLPPWPWAPPPAFPFPHLP-PIFSPPSPPP 291
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 9.1
Identities = 18/63 (28%), Positives = 22/63 (34%)
Frame = +1
Query: 1030 PXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRA 1209
P P S P +G P P K +PP SPP PP P +A
Sbjct: 567 PVPEGHTPSPPKSGP-PAGESPPTPESKASPPPTPEEYTPSPPKSTPPAEKSPPTPESKA 625
Query: 1210 TXP 1218
+ P
Sbjct: 626 SSP 628
>10_08_0222 - 15983756-15984313
Length = 185
Score = 29.1 bits (62), Expect = 9.1
Identities = 22/96 (22%), Positives = 25/96 (26%), Gaps = 1/96 (1%)
Frame = -2
Query: 1365 GXGXPGXGXXGAGXGXXGXWXXAGXXXPXXXKXXXXRGGPXGXXXXXAXRXGXPXXRXRX 1186
G G G G G G + AG P GG G G
Sbjct: 76 GSGGGANGGSGYGSGSGSGYGQAGSYGPYGGGYAQGGGGGGGSGGGQNGGSGSGSGSGSG 135
Query: 1185 XXEGGG-XPXGGASXXXGXXXXXGXLRAXPPRAEGN 1081
+ GG P GG G G P G+
Sbjct: 136 SGQAGGYGPYGGGYAQAGGQGGGGGGGQSGPGGSGS 171
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.1 bits (62), Expect = 9.1
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPD 1082
PP+P PP P AP S P PP +AP PD
Sbjct: 509 PPVPTPPAP-APPVSTLPSPAPSVHTPPVTAPPATAPPMIAPPVATPPD 556
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +1
Query: 1078 PISLCPGRXSPKRTPPXXXPXXXX----SPPXGXPPPFXXXPXAXPR 1206
P+S P TPP P +PP PP P PR
Sbjct: 520 PVSTLPSPAPSVHTPPVTAPPATAPPMIAPPVATPPDSASSPSTVPR 566
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 29.1 bits (62), Expect = 9.1
Identities = 20/80 (25%), Positives = 20/80 (25%), Gaps = 1/80 (1%)
Frame = +1
Query: 1114 RTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXPGRXXXPTSXGXPXAX-XXLXXXGXX 1290
R PP P P PP P P T P P P G
Sbjct: 437 RMPPPLVPTPPAHAPPVATPPTLATPVPTPPVTAPPADVPPGFTVSPTTTHYSFGYGGAS 496
Query: 1291 RPCAXPXAXXTXXXAXGPPP 1350
A P A GP P
Sbjct: 497 LSSAMPRAAAAPLVLRGPAP 516
>07_03_0797 + 21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 1156 PXGXPPPFXXXPXAXPRATXPGRXXXPTSXGXPXA 1260
P PP F P A P + PG P P A
Sbjct: 102 PAPSPPSFAPSPAAGPTRSGPGNAWGPRREAAPTA 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,956,704
Number of Sequences: 37544
Number of extensions: 570545
Number of successful extensions: 3013
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4617638984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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