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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_H03_e24_15.seq
         (1453 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.99 
SB_31443| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   2.3  
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   3.0  
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)                       30   4.0  
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   4.0  
SB_55209| Best HMM Match : WRKY (HMM E-Value=1.1)                      29   7.0  
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)                  29   7.0  
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.0  
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)            29   7.0  
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)                29   7.0  
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   9.3  
SB_12790| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   9.3  
SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)           29   9.3  

>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1572

 Score = 32.3 bits (70), Expect = 0.99
 Identities = 27/88 (30%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
 Frame = +1

Query: 967  PXFPP--XXNXXXPEXFFFXPXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPX 1140
            P FPP    +   P      P +P PG     +P  G     + P      R PP   P 
Sbjct: 439  PRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPH 498

Query: 1141 XXXSPPXGXPPPFXXXPXA-XPRATXPG 1221
                PP G P P    P A  PR   PG
Sbjct: 499  QRVPPP-GAPHPRVPPPGAPHPRVPPPG 525



 Score = 31.9 bits (69), Expect = 1.3
 Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA- 1197
            P +P PG     +P  G     + P   S +R  P   P     PP G P P    P A 
Sbjct: 389  PRVPSPGASHPRVPPPGAPHPRVPPPGASHQRVRPPGAPHPRVPPP-GAPHPRFPPPGAP 447

Query: 1198 XPRATXPG 1221
             PR   PG
Sbjct: 448  HPRVPPPG 455



 Score = 31.9 bits (69), Expect = 1.3
 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA- 1197
            P +P PG     +P  G     + P      R PP   P     PP G P P    P A 
Sbjct: 399  PRVPPPGAPHPRVPPPGASHQRVRPPGAPHPRVPPPGAPHPRFPPP-GAPHPRVPPPGAP 457

Query: 1198 XPRATXPG 1221
             PR   PG
Sbjct: 458  HPRVPPPG 465



 Score = 31.9 bits (69), Expect = 1.3
 Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA- 1197
            P +P PG     +P  G     + P     +R PP   P     PP G P P    P A 
Sbjct: 469  PRVPPPGAPHPRVPPPGAPHPRVPPPGAPHQRVPPPGAPHPRVPPP-GAPHPRVPPPGAP 527

Query: 1198 XPRATXPG 1221
             PR   PG
Sbjct: 528  HPRVPPPG 535



 Score = 31.5 bits (68), Expect = 1.7
 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA- 1197
            P +P PG     +P  G     + P      R PP   P     PP G P P    P A 
Sbjct: 489  PRVPPPGAPHQRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP-GAPHPRVPPPGAP 547

Query: 1198 XPRATXPG 1221
             PR   PG
Sbjct: 548  HPRVPPPG 555



 Score = 31.5 bits (68), Expect = 1.7
 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXP-XA 1197
            P +P PG     +P  G     + P   S  R PP   P     PP G P P    P   
Sbjct: 529  PRVPPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVPPP-GAPHPRVPPPGTP 587

Query: 1198 XPRATXPG 1221
             PR   PG
Sbjct: 588  HPRVPPPG 595



 Score = 31.1 bits (67), Expect = 2.3
 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA- 1197
            P +P PG     +P  G     + P      R PP   P     PP G P P    P A 
Sbjct: 479  PRVPPPGAPHPRVPPPGAPHQRVPPPGAPHPRVPPPGAPHPRVPPP-GAPHPRVPPPGAP 537

Query: 1198 XPRATXPG 1221
             PR   PG
Sbjct: 538  HPRVPPPG 545



 Score = 30.7 bits (66), Expect = 3.0
 Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA- 1197
            P +P PG      P  G     + P      R PP   P     PP G P P    P A 
Sbjct: 429  PRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP-GAPHPRVPPPGAP 487

Query: 1198 XPRATXPG 1221
             PR   PG
Sbjct: 488  HPRVPPPG 495



 Score = 30.7 bits (66), Expect = 3.0
 Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA- 1197
            P +P PG     +P  G     + P      R PP   P     PP G P P    P A 
Sbjct: 539  PRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPP-GTPHPRVPPPGAP 597

Query: 1198 XPRATXPG 1221
             P+   PG
Sbjct: 598  HPKVPPPG 605



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSL-PXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA 1197
            P +P PG     + P     P    PG   P R PP   P     PP G P P    P A
Sbjct: 409  PRVPPPGASHQRVRPPGAPHPRVPPPGAPHP-RFPPPGAPHPRVPPP-GAPHPRVPPPGA 466

Query: 1198 -XPRATXPG 1221
              PR   PG
Sbjct: 467  PHPRVPPPG 475



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
 Frame = +1

Query: 1027 LPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX-P 1203
            +P PG     +P  G     + P      R PP   P     PP G P P    P A  P
Sbjct: 501  VPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP-GAPHPRVPPPGASHP 559

Query: 1204 RATXPG 1221
            R   PG
Sbjct: 560  RVPPPG 565



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGX-XPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXA 1197
            P +P PG     +P  G   P    PG   P+  PP         PP G P P    P A
Sbjct: 519  PRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGA--SHPRVPPPGAPHPRVPPPGA 576

Query: 1198 -XPRATXPG 1221
              PR   PG
Sbjct: 577  PHPRVPPPG 585


>SB_31443| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 779

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 1108 PKRTPPXXXPXXXXSPPXGXPPP 1176
            P+R PP   P     PP G PPP
Sbjct: 172  PRRLPPQLPPSSSLPPPFGEPPP 194


>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 669

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 21/77 (27%), Positives = 22/77 (28%)
 Frame = -3

Query: 1364 GXGXRGGGPXAXXXVXXAXGXAQGRXXPXXXRXXXAXGXPWXVGXLXRPGXVARGXAKGX 1185
            G G  GGG  A      A G   G             G     G     G  A G   G 
Sbjct: 257  GGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGVGGGA 316

Query: 1184 KXKGGGXPXGGLXXXXG 1134
               GGG   GG+    G
Sbjct: 317  TGGGGGATGGGVGATGG 333


>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 382

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = +1

Query: 1054 SLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPP 1176
            S+P  G  P    PG   P   PP   P     PP G PPP
Sbjct: 246  SMPPPGMPP----PGMMPPPGFPPMGMPGMGGMPPPGMPPP 282


>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 19/67 (28%), Positives = 21/67 (31%)
 Frame = +3

Query: 936  PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPEA 1115
            P  P PP P AP P       P   +  P  PP        P     P+ P P    P  
Sbjct: 136  PNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPY 195

Query: 1116 XPXXXXP 1136
             P    P
Sbjct: 196  PPPPNAP 202



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 18/59 (30%), Positives = 20/59 (33%)
 Frame = +3

Query: 936  PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPE 1112
            PP P PP P  P P       P      P PPP        P     P+ P P    P+
Sbjct: 185  PPYPPPPNPPYPPPPNAPNPPPPN---PPYPPPPNAPNPPYPPPPNAPNPPYPPPPNPQ 240


>SB_55209| Best HMM Match : WRKY (HMM E-Value=1.1)
          Length = 386

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 148 SVISDITENYLQVIF*TKPRYLSTSISANIPRNNIPS 38
           S+ISDI +   + IF    RYL T+ S +  R+NI S
Sbjct: 84  SLISDIVKRIYESIFAQLYRYLETNYSRHCVRSNISS 120


>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
          Length = 172

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 14/47 (29%), Positives = 17/47 (36%)
 Frame = +1

Query: 1078 PISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXP 1218
            P +  P   +P  T P        +PP G P      P   P AT P
Sbjct: 126  PAATTPPTAAPAATTPPTAAPAATTPPTGAPAA-TTPPTGAPAATTP 171


>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 67

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 14/47 (29%), Positives = 17/47 (36%)
 Frame = +1

Query: 1078 PISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXP 1218
            P +  P   +P  T P        +PP G P      P   P AT P
Sbjct: 16   PAATTPPTAAPAATTPPTAAPAATTPPTGAPAA-TTPPTGAPAATTP 61


>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
          Length = 1439

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 15/53 (28%), Positives = 18/53 (33%)
 Frame = +1

Query: 1096 GRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXPGRXXXPTSXGXP 1254
            G  +P   PP   P    +P  G P P    P A P +        PT    P
Sbjct: 529  GVPTPVTEPPPAPPPSVFAPSSGVPTPVTAPPPAPPPSVFAPSSAVPTPATAP 581


>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2202

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = -3

Query: 1235 GXLXRPGXVARGXAKGXKXKGGGXPXGGLXXXXGXXXGGVRFG 1107
            G     G    G   G    G G   GGL    G   GGV  G
Sbjct: 556  GTTSSGGNTGSGTTTGGVNTGSGTTTGGLNTGSGTTTGGVNSG 598


>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1000

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 3/78 (3%)
 Frame = +1

Query: 1030 PXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXP---XAX 1200
            P   E     P     P +  PG   P   PP         PP G   P    P    A 
Sbjct: 894  PRRNESPSQTPGGSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAP 953

Query: 1201 PRATXPGRXXXPTSXGXP 1254
            P    PG    P   G P
Sbjct: 954  PPPPPPGGSAPPPGGGAP 971


>SB_12790| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 14/47 (29%), Positives = 17/47 (36%)
 Frame = +1

Query: 1078 PISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXP 1218
            P +  P   +P  T P        +PP G P      P   P AT P
Sbjct: 69   PAATTPPTVAPAATTPPTAAPAATTPPTGAPAA-TTPPTGAPAATTP 114


>SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)
          Length = 605

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
 Frame = +3

Query: 939  PIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGP-----DFPLPGEX 1103
            P P PP P        K     T+ F P PP           Q   P     + P+P + 
Sbjct: 353  PAPVPPSPNLGYSRTEKVPGGPTYTFGPPPPAASNAKPAQYTQYTAPAPVVYNPPVPPKA 412

Query: 1104 KPEAXPXXXXP 1136
             P A P    P
Sbjct: 413  LPAAAPHYEKP 423


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,373,900
Number of Sequences: 59808
Number of extensions: 512181
Number of successful extensions: 1520
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4671635246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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