Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_H03_e24_15.seq
         (1453 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.58 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   5.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   7.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.58
 Identities = 19/78 (24%), Positives = 22/78 (28%)
 Frame = +1

Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
            P  P  G      P N      +  G   P R P          PP G  P F   P   
Sbjct: 268  PPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMGD 327

Query: 1201 PRATXPGRXXXPTSXGXP 1254
            P+ + P         G P
Sbjct: 328  PQTSRPPSGNDNMGGGPP 345


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 1.4
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +1

Query: 1030 PXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRA 1209
            P  G+   S   +     S+  G  SP R+           PP   PPP    P   PR 
Sbjct: 745  PMGGDQQNSNGSSSTASSSVSTGMPSPSRS--AFADGIGSPPPPPPPPPSSLSPGGVPRP 802

Query: 1210 T 1212
            T
Sbjct: 803  T 803


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 936 PPIPXPPXPXAPXPS 980
           PP P PP P  P PS
Sbjct: 582 PPAPPPPPPMGPPPS 596


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 7.2
 Identities = 16/55 (29%), Positives = 17/55 (30%)
 Frame = -1

Query: 1099 SPGRGKSGPXRCXGAXXXLLRXXXXXGQKKXVXGXXXXXXEGXGAXGXGGSGXGG 935
            S G G  G     G+    LR        K           G GA G GG   GG
Sbjct: 167  SGGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGG 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,005,972
Number of Sequences: 2352
Number of extensions: 17131
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 169060320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)