Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H03_e24_15.seq
(1453 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 35 0.85
AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens ... 35 0.85
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 34 1.1
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 34 1.5
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 34 1.5
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 34 1.5
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 34 1.5
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 34 1.5
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 34 1.5
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 34 1.5
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 34 1.5
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 33 2.0
BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein. 33 2.6
AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease ... 33 2.6
AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens ... 33 2.6
AB048797-1|BAB39742.2| 537|Homo sapiens mosaic serine protease ... 33 2.6
AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic se... 33 2.6
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 32 6.0
AF263313-1|AAG38503.1| 1049|Homo sapiens STE20-like kinase protein. 32 6.0
AB020688-1|BAA74904.2| 1064|Homo sapiens KIAA0881 protein protein. 32 6.0
BC021207-1|AAH21207.1| 321|Homo sapiens atonal homolog 8 (Droso... 31 7.9
AK074681-1|BAC11135.1| 321|Homo sapiens protein ( Homo sapiens ... 31 7.9
AK027614-1|BAB55233.1| 321|Homo sapiens protein ( Homo sapiens ... 31 7.9
AF529205-1|AAO85773.1| 321|Homo sapiens basic helix-loop-helix ... 31 7.9
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens cDNA
FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 34.7 bits (76), Expect = 0.85
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXPGRXXXPTSXGXPXAXXXL 1272
P R SP+RTPP P PP P P T P PT+ P
Sbjct: 49 PPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMP-PTAPPTRTPPTA--SPARTPPT 105
Query: 1273 XXXGXXRPCAXPXAXXTXXXAXGPPPR 1353
P A P PPR
Sbjct: 106 ESPARTPPTASPARTPPRASPTRTPPR 132
Score = 33.9 bits (74), Expect = 1.5
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXP 1218
P R SP+RTPP P +PP P P A PR T P
Sbjct: 148 PPRASPRRTPPRASP--TRTPPRASPK--RTPPRASPRRTPP 185
Score = 33.9 bits (74), Expect = 1.5
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSPPXGXP--PPFXXXPXAXPRATXPGRXXXPTSXGXPXAXX 1266
P R SPKRTPP P +PP P P P P P R PT P
Sbjct: 193 PPRASPKRTPPTASP--TRTPPRASPTRTPPTESPARTPPRASPTR-TPPTE--SPARTP 247
Query: 1267 XLXXXGXXRPCAXPXAXXTXXXAXGPPP 1350
P A P PP
Sbjct: 248 SRASTRRTPPRASPTRTPPRASPKRTPP 275
Score = 33.5 bits (73), Expect = 2.0
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXP 1218
P R SPKRTPP P +PP P P A P+ T P
Sbjct: 166 PPRASPKRTPPRASP--RRTPPRASPT--RAPPRASPKRTPP 203
Score = 33.1 bits (72), Expect = 2.6
Identities = 25/89 (28%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSPPXGXP--PPFXXXPXAXPRATXPGRXXXPTSXGXPXAXX 1266
P R SP+RTPP P +PP P P P P P R PT P
Sbjct: 175 PPRASPRRTPPRASP--TRAPPRASPKRTPPTASPTRTPPRASPTR-TPPTE--SPARTP 229
Query: 1267 XLXXXGXXRPCAXPXAXXTXXXAXGPPPR 1353
P P + PPR
Sbjct: 230 PRASPTRTPPTESPARTPSRASTRRTPPR 258
>AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens cDNA:
FLJ22184 fis, clone HRC00983. ).
Length = 616
Score = 34.7 bits (76), Expect = 0.85
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 1105 SPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXPGRXXXP 1236
SP TPP P +PP PP P P AT P + P
Sbjct: 178 SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 221
Score = 33.5 bits (73), Expect = 2.0
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 1105 SPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPRATXPGR 1224
SP TPP P +PP PP P P AT P R
Sbjct: 209 SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR 248
Score = 31.9 bits (69), Expect = 6.0
Identities = 26/116 (22%), Positives = 36/116 (31%), Gaps = 1/116 (0%)
Frame = +1
Query: 1015 FXPXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXX-XXSPPXGXPPPFXXXP 1191
F P P + P ++ P + P +PP P +PP PPP P
Sbjct: 169 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPP--SPPASPPMSPSATPPPQAPPPLAAPP 226
Query: 1192 XAXPRATXPGRXXXPTSXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P++ P L P P A PPP+ P
Sbjct: 227 LQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVP-PSPPASLPMSPLAKPPPQAP 281
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 34.3 bits (75), Expect = 1.1
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 4/93 (4%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXP-XXXXSPPXGXPP---PFXXXPXAXPRATXPGRXXXPTSXGXPXA 1260
P R SP RTPP P + P PP P P A P T P + P
Sbjct: 189 PPRASPTRTPPRESPRMSHRASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTR 248
Query: 1261 XXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P A P PP P
Sbjct: 249 MPPRASPTRRPPRASPTGSPPRASPMTPPRASP 281
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P S+ P P PP PPP P +
Sbjct: 937 PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 995
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T S P G + P GPPP P
Sbjct: 996 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 1049
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P S+ P P PP PPP P +
Sbjct: 669 PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 727
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T S P G + P GPPP P
Sbjct: 728 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 781
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P S+ P P PP PPP P +
Sbjct: 937 PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 995
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T S P G + P GPPP P
Sbjct: 996 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 1049
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P S+ P P PP PPP P +
Sbjct: 669 PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 727
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T S P G + P GPPP P
Sbjct: 728 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 781
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P S+ P P PP PPP P +
Sbjct: 937 PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 995
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T S P G + P GPPP P
Sbjct: 996 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 1049
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P S+ P P PP PPP P +
Sbjct: 383 PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 441
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T S P G + P GPPP P
Sbjct: 442 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 495
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P S+ P P PP PPP P +
Sbjct: 383 PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 441
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T S P G + P GPPP P
Sbjct: 442 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 495
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P S+ P P PP PPP P +
Sbjct: 923 PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 981
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T S P G + P GPPP P
Sbjct: 982 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 1035
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein ARP
protein.
Length = 995
Score = 33.5 bits (73), Expect = 2.0
Identities = 26/114 (22%), Positives = 34/114 (29%), Gaps = 1/114 (0%)
Frame = +1
Query: 1021 PXLPXPGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAX 1200
P LP P +G P+S+ P P PP PPP P +
Sbjct: 366 PQLPAPQAHKHPPHLSGPSPLSMNANLPPPPALKPLSS-LSTHHPPSAHPPPLQLMPQSQ 424
Query: 1201 PRATXPGRXXXPT-SXGXPXAXXXLXXXGXXRPCAXPXAXXTXXXAXGPPPRXP 1359
P + P + T + P G + P GPPP P
Sbjct: 425 PLPSSPAQPPGLTRTRNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 478
>BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein.
Length = 562
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSP----PXGXPPPFXXXPXAXPRATXPGR 1224
P + SP TPP SP P G PP A P T PGR
Sbjct: 21 PAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGR 68
>AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease
serine 6 protein.
Length = 558
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSP----PXGXPPPFXXXPXAXPRATXPGR 1224
P + SP TPP SP P G PP A P T PGR
Sbjct: 21 PAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGR 68
>AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens cDNA
FLJ14892 fis, clone PLACE1004270, weakly similar to
TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
Length = 491
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSP----PXGXPPPFXXXPXAXPRATXPGR 1224
P + SP TPP SP P G PP A P T PGR
Sbjct: 21 PAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGR 68
>AB048797-1|BAB39742.2| 537|Homo sapiens mosaic serine protease
protein.
Length = 537
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSP----PXGXPPPFXXXPXAXPRATXPGR 1224
P + SP TPP SP P G PP A P T PGR
Sbjct: 21 PAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGR 68
>AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic serine
protease protein.
Length = 581
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +1
Query: 1093 PGRXSPKRTPPXXXPXXXXSP----PXGXPPPFXXXPXAXPRATXPGR 1224
P + SP TPP SP P G PP A P T PGR
Sbjct: 21 PAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGR 68
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 31.9 bits (69), Expect = 6.0
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Frame = +1
Query: 1036 PGEXXXSLPXNGXXPISLCPGRXSPKRTPPXXXPXXXXSPPXGXPPPFXXXPXAXPR-AT 1212
PG LP P +LCP R P P +PP PP P A P A+
Sbjct: 180 PGPAPLPLPLPPPAPAALCP------RDP--RAPAACSAPPGAAPPAAAASPPASPAPAS 231
Query: 1213 XPG--RXXXPT 1239
PG R PT
Sbjct: 232 SPGFYRGAYPT 242
>AF263313-1|AAG38503.1| 1049|Homo sapiens STE20-like kinase protein.
Length = 1049
Score = 31.9 bits (69), Expect = 6.0
Identities = 17/65 (26%), Positives = 20/65 (30%)
Frame = +1
Query: 1153 PPXGXPPPFXXXPXAXPRATXPGRXXXPTSXGXPXAXXXLXXXGXXRPCAXPXAXXTXXX 1332
PP G PPP P P PT G P L +P + +
Sbjct: 958 PPPGMPPPAWRQPSLLAPPGPPNWLGPPTQSGTPRGGALLLLRNSPQPLRRAASGGSGSE 1017
Query: 1333 AXGPP 1347
GPP
Sbjct: 1018 NVGPP 1022
>AB020688-1|BAA74904.2| 1064|Homo sapiens KIAA0881 protein protein.
Length = 1064
Score = 31.9 bits (69), Expect = 6.0
Identities = 17/65 (26%), Positives = 20/65 (30%)
Frame = +1
Query: 1153 PPXGXPPPFXXXPXAXPRATXPGRXXXPTSXGXPXAXXXLXXXGXXRPCAXPXAXXTXXX 1332
PP G PPP P P PT G P L +P + +
Sbjct: 973 PPPGMPPPAWRQPSLLAPPGPPNWLGPPTQSGTPRGGALLLLRNSPQPLRRAASGGSGSE 1032
Query: 1333 AXGPP 1347
GPP
Sbjct: 1033 NVGPP 1037
>BC021207-1|AAH21207.1| 321|Homo sapiens atonal homolog 8
(Drosophila) protein.
Length = 321
Score = 31.5 bits (68), Expect = 7.9
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPEA 1115
P +P PP P P P P F P P R AP R P P PE+
Sbjct: 119 PGLPTPPPPPPPAPQSQAPGGPEAQPFR-EPGPRPRILLCAPPARPAPSAPPAPPAPPES 177
>AK074681-1|BAC11135.1| 321|Homo sapiens protein ( Homo sapiens cDNA
FLJ90200 fis, clone MAMMA1001615, weakly similar to
NEUROGENIC DIFFERENTIATION FACTOR 1. ).
Length = 321
Score = 31.5 bits (68), Expect = 7.9
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPEA 1115
P +P PP P P P P F P P R AP R P P PE+
Sbjct: 119 PGLPTPPPPPPPAPQSQAPGGPEAQPFR-EPGPRPRILLCAPPARPAPSAPPAPPAPPES 177
>AK027614-1|BAB55233.1| 321|Homo sapiens protein ( Homo sapiens cDNA
FLJ14708 fis, clone NT2RP3000603, weakly similar to
NEUROGENIC DIFFERENTIATION FACTOR 1. ).
Length = 321
Score = 31.5 bits (68), Expect = 7.9
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPEA 1115
P +P PP P P P P F P P R AP R P P PE+
Sbjct: 119 PGLPTPPPPPPPAPQSQAPGGPEAQPFR-EPGPRPRILLCAPPARPAPSAPPAPPAPPES 177
>AF529205-1|AAO85773.1| 321|Homo sapiens basic helix-loop-helix
transcription factor protein.
Length = 321
Score = 31.5 bits (68), Expect = 7.9
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +3
Query: 936 PPIPXPPXPXAPXPSXXKXXXPXTFFFXPXPPPXRRXXXLAPXQRXGPDFPLPGEXKPEA 1115
P +P PP P P P P F P P R AP R P P PE+
Sbjct: 119 PGLPTPPPPPPPAPQSQAPGGPEAQPFR-EPGPRPRILLCAPPARPAPSAPPAPPAPPES 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,190,250
Number of Sequences: 237096
Number of extensions: 3233825
Number of successful extensions: 18222
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17502
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 21375562260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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