Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H02_e16_16.seq
(1445 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 263 3e-70
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 260 1e-69
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 255 7e-68
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 218 8e-57
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 155 1e-37
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 150 3e-36
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 2e-27
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 110 3e-24
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 4e-24
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 4e-24
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 109 4e-24
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 109 5e-24
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 7e-24
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 7e-24
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 109 7e-24
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 107 2e-23
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 107 3e-23
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 2e-22
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 104 2e-22
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 2e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 86 8e-17
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 82 1e-15
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 68 2e-11
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 6e-10
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 52 9e-07
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 50 6e-06
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 50 6e-06
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 40 0.007
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 38 0.015
SB_18555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 29 9.2
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 29 9.2
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 263 bits (644), Expect = 3e-70
Identities = 139/224 (62%), Positives = 144/224 (64%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVDS L VVRKEAESCDCLQGFQ KIREEYPDRIM
Sbjct: 105 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
NT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGD
Sbjct: 165 NTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGD 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVS + P + KLAVNMVPFPRLHFFMP F P
Sbjct: 225 LNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLTSRGSQQYRA 283
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEV 677
P + AKNMM R GR LTV MKEV
Sbjct: 284 LTVPELTQQMFDAKNMMAACDPR-HGRYLTVAAMFRGRMSMKEV 326
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 260 bits (638), Expect = 1e-69
Identities = 136/224 (60%), Positives = 144/224 (64%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAEL+DS L VVRKEAESCDC+QGFQ KIREEYPDRIM
Sbjct: 105 HYTEGAELMDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
NT+S+VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGD
Sbjct: 165 NTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGD 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVS + P + KLAVNMVPFPRLHFFMP F P
Sbjct: 225 LNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLTSRGSQQYRA 283
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEV 677
P + AKNMM R GR LTV MKEV
Sbjct: 284 LTVPELTQQMFDAKNMMAACDPR-HGRYLTVAAMFRGRMSMKEV 326
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 255 bits (624), Expect = 7e-68
Identities = 135/224 (60%), Positives = 143/224 (63%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVDS L VVRKEAESCDC+QGFQ KIREEYPDRIM
Sbjct: 50 HYTEGAELVDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIM 109
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
NT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGD
Sbjct: 110 NTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGD 169
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVS + P + KLAVNMVPFPRL FFMP F P
Sbjct: 170 LNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGF-APLTSRGSQQYRA 228
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEV 677
P + AKNMM + GR LTV MKE+
Sbjct: 229 LTVPELTQQMFDAKNMMA-ACDPLHGRYLTVAAMFRGRMSMKEL 271
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 218 bits (533), Expect = 8e-57
Identities = 103/126 (81%), Positives = 105/126 (83%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVDS L VVRKEAESCDCLQGFQ KIREEYPDRIM
Sbjct: 318 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 377
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
NT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGD
Sbjct: 378 NTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGD 437
Query: 366 LNHLVS 383
LNHLVS
Sbjct: 438 LNHLVS 443
Score = 34.7 bits (76), Expect = 0.19
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 388 TMSGVTTCLRFPGQ 429
TMSGVTTCLRFPGQ
Sbjct: 445 TMSGVTTCLRFPGQ 458
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 155 bits (375), Expect = 1e-37
Identities = 82/175 (46%), Positives = 102/175 (58%), Gaps = 24/175 (13%)
Frame = +3
Query: 51 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 230
+RKEAE CD +QGFQ ++EEYPDRI+++ SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 231 VEPYNATLSVHQLVENTDET------------------------YCIDNEALYDICFRTL 338
VEPYNA LSVHQL+E TDE +CIDNEALYDIC++TL
Sbjct: 61 VEPYNAALSVHQLLETTDEVSEIVVEPYNAALSVHQLLETTDEVFCIDNEALYDICYKTL 120
Query: 339 KLSTPTYGDLNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
KL+T TY DLNH++S + P + KLAVNM+P+PRLHFFMP F
Sbjct: 121 KLNTTTYSDLNHIISNTMSGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGF 175
Score = 33.1 bits (72), Expect = 0.57
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 497 PVSAPLTXRGSQQYRALTVPELTQQMF 577
P APLT R YRALTV +LTQ +F
Sbjct: 173 PGFAPLTSRECVSYRALTVADLTQAIF 199
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 150 bits (363), Expect = 3e-36
Identities = 68/125 (54%), Positives = 86/125 (68%)
Frame = +3
Query: 9 YTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 188
YTEGAEL+DS + +RK AE+CD +QGFQ KIREEYPDR+++
Sbjct: 14 YTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLSKIREEYPDRLVS 73
Query: 189 TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 368
++ V+PSP VS+TV EPYNATLS HQLV+ D CIDNEALY+IC+ LK TPTY +L
Sbjct: 74 SFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEALYNICYNVLKRETPTYSEL 133
Query: 369 NHLVS 383
N L++
Sbjct: 134 NSLIA 138
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 388 TMSGVTTCLRFPGQ 429
TMSGVTT LRFPGQ
Sbjct: 140 TMSGVTTSLRFPGQ 153
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 121 bits (291), Expect = 2e-27
Identities = 57/166 (34%), Positives = 91/166 (54%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G + +D+ L +RK A+ C LQGF ++ +Y +
Sbjct: 525 HYTVGKDHIDNVLDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSK 584
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 585 LEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 644
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
LN L+ D V + LS + W + + N+VP+PR+HF M +
Sbjct: 645 LNRLI--DCVLHHCLSTLRWILNVDLMEFQTNLVPYPRIHFPMATY 688
Score = 106 bits (254), Expect = 5e-23
Identities = 51/161 (31%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G +L++ L +RK A+ C LQGF ++ +Y +
Sbjct: 92 HYTVGKQLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 151
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 152 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 211
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 212 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 252
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 110 bits (264), Expect = 3e-24
Identities = 54/161 (33%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D L +RK A+ C LQGF ++ +Y +
Sbjct: 692 HYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 751
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 752 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 811
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 812 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 852
Score = 108 bits (259), Expect = 1e-23
Identities = 53/161 (32%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E+VD L +RK A+ C LQGF ++ +Y +
Sbjct: 171 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 230
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 231 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 290
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 291 LNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 331
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 109 bits (263), Expect = 4e-24
Identities = 52/161 (32%), Positives = 85/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D+ L +RK A+ C LQGF ++ +Y +
Sbjct: 107 HYTVGKEMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 166
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 167 LEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 226
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 109 bits (263), Expect = 4e-24
Identities = 55/166 (33%), Positives = 85/166 (51%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E +D L +RK A+ C LQGF ++ +Y +
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
++V P+P++S VVEPYN+ LS H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 132 LEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 191
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
LN L+ + ++ + N+VP+PR+HF M +
Sbjct: 192 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATY 237
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 109 bits (263), Expect = 4e-24
Identities = 54/161 (33%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E+VD L +RK A+ C LQGF ++ +Y +
Sbjct: 107 HYTVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 166
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 167 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 226
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267
Score = 109 bits (263), Expect = 4e-24
Identities = 54/161 (33%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E+VD L +RK A+ C LQGF ++ +Y +
Sbjct: 540 HYTVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 599
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 600 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 659
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 660 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 700
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 109 bits (262), Expect = 5e-24
Identities = 53/161 (32%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D L +RK A+ C LQGF ++ +Y +
Sbjct: 106 HYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSK 165
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 166 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 225
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 226 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 266
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 109 bits (261), Expect = 7e-24
Identities = 53/161 (32%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D L +RK A+ C LQGF ++ +Y +
Sbjct: 44 HYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 103
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 104 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 163
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 164 LNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 204
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 109 bits (261), Expect = 7e-24
Identities = 52/161 (32%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D L +RK A+ C LQGF ++ +Y +
Sbjct: 911 HYTVGKEMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSK 970
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 971 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 1030
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 1031 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 1071
Score = 108 bits (259), Expect = 1e-23
Identities = 54/166 (32%), Positives = 85/166 (51%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E +D L +RK A+ C LQGF ++ +Y +
Sbjct: 478 HYTVGKEQIDIVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSK 537
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P +S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 538 LEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 597
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
LN L+S + ++ + N+VP+PR+HF M +
Sbjct: 598 LNRLISQLVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASY 643
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 109 bits (261), Expect = 7e-24
Identities = 53/161 (32%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D L +RK A+ C LQGF ++ +Y +
Sbjct: 32 HYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 91
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 92 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 151
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 152 LNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 192
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 107 bits (258), Expect = 2e-23
Identities = 53/161 (32%), Positives = 83/161 (51%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E +D L +RK A+ C LQGF ++ +Y +
Sbjct: 32 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 91
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
++V P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 92 LEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 151
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 152 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 192
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 107 bits (256), Expect = 3e-23
Identities = 52/161 (32%), Positives = 83/161 (51%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D L RK A+ C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSK 166
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +
Sbjct: 167 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTN 226
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 104 bits (250), Expect = 2e-22
Identities = 50/161 (31%), Positives = 81/161 (50%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E+V+ + +RK + C LQGF + +Y +
Sbjct: 1018 HYTIGKEMVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSK 1077
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
++V P+P +S VVEPYN+ L+ H +E++D T+ +DNEA+YD+C R L + P Y +
Sbjct: 1078 LEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDLCRRNLDVERPGYAN 1137
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + ++ + N+VP+PR+HF
Sbjct: 1138 LNRLIGQIVSSITSSLRFDGALNVDLTEFQTNLVPYPRIHF 1178
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 104 bits (249), Expect = 2e-22
Identities = 52/161 (32%), Positives = 82/161 (50%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G + VD L +RK A+ C LQGF ++ +Y +
Sbjct: 97 HYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 156
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
++V P+P ++ VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 157 LEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTN 216
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L+ + S+ + N+VP+PR+HF
Sbjct: 217 LNRLIGQIVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHF 257
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 94.3 bits (224), Expect = 2e-19
Identities = 46/144 (31%), Positives = 73/144 (50%)
Frame = +3
Query: 57 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVE 236
K A+ C LQGF ++ +Y R ++V P+P++S VVE
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 237 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLDHVWRYHLSQ 416
PYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +
Sbjct: 315 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSVTASLR 374
Query: 417 VPWSVECGSPKLAVNMVPFPRLHF 488
++ + N+VP+PR+HF
Sbjct: 375 FDGALNVDLTEFQTNLVPYPRIHF 398
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 85.8 bits (203), Expect = 8e-17
Identities = 38/71 (53%), Positives = 47/71 (66%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HY+EGAEL+D+ V+RKEAE+CDC+QG Q KIREEYPDRI+
Sbjct: 61 HYSEGAELIDNIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRIL 120
Query: 186 NTYSVVPSPKV 218
+ +SVVPSPKV
Sbjct: 121 SAFSVVPSPKV 131
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 81.8 bits (193), Expect = 1e-15
Identities = 36/106 (33%), Positives = 58/106 (54%)
Frame = +3
Query: 63 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPY 242
A+ C LQGF ++ +Y + +++ P+P++S VVEPY
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 60
Query: 243 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLV 380
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+
Sbjct: 61 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLM 106
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 67.7 bits (158), Expect = 2e-11
Identities = 35/122 (28%), Positives = 61/122 (50%)
Frame = +3
Query: 18 GAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYS 197
G + +D L +V++E E CD L GF +R+ YP+ +
Sbjct: 117 GPKSIDKVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPNSFIVNNV 176
Query: 198 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHL 377
V P + + +V+ YNATL++ QL +++D ++N+ L IC + L L ++ D+N +
Sbjct: 177 VWPY-SMGEVIVQNYNATLTLAQLYKSSDAIIIVENDKLQKICSKLLNLKHISFRDINKV 235
Query: 378 VS 383
VS
Sbjct: 236 VS 237
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 62.9 bits (146), Expect = 6e-10
Identities = 33/96 (34%), Positives = 50/96 (52%)
Frame = +3
Query: 207 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSL 386
S +SD VV+PYN+ L++ +L +N D +DN AL I L++ PT+ +N LVS
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTALNRIAADRLRIPNPTFSQVNQLVST 270
Query: 387 DHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFM 494
+ P + L +++P PRLHF M
Sbjct: 271 IMATSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLM 306
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 52.4 bits (120), Expect = 9e-07
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +3
Query: 156 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 326
+ ++YPD T +V PS D + PYN+ L++HQL E+ D I+N+AL DIC
Sbjct: 169 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQALVDIC 224
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 49.6 bits (113), Expect = 6e-06
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +3
Query: 297 IDNEALYDICFRTLKLSTPTYGDLNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFP 476
+DNEA+YDIC R L + PTY +LN L+ + ++ + N+VP+P
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 61
Query: 477 RLHF 488
R+HF
Sbjct: 62 RIHF 65
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 49.6 bits (113), Expect = 6e-06
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +3
Query: 297 IDNEALYDICFRTLKLSTPTYGDLNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFP 476
+DNEA+YDIC R L + PTY +LN L+ + ++ + N+VP+P
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 61
Query: 477 RLHF 488
R+HF
Sbjct: 62 RIHF 65
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 156 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 308
+ ++YPD T +V PS D + PYN+ L++HQL E+ D I+N+
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 39.5 bits (88), Expect = 0.007
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Frame = +3
Query: 18 GAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYS 197
G L+ + +RKE E CD G + + YP + + S
Sbjct: 93 GTSLLHMTMDAMRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP--LAHVMS 150
Query: 198 VVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDN-EALYDICFRTLKLS 347
V SP VS ++ ++ YN+ LS+ L N D N + L + + +K+S
Sbjct: 151 VAVSPHVSGESPLQHYNSLLSLAALQRNADGILLFHNDDVLRQVMLQRVKIS 202
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 38.3 bits (85), Expect = 0.015
Identities = 27/78 (34%), Positives = 31/78 (39%)
Frame = +3
Query: 462 MVPFPRLHFFMPRFRLPXXXXXXXXXXXXPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVG 641
MVPFPRLHFFMP F P + A+NMM R GR LTV
Sbjct: 1 MVPFPRLHFFMPGF-APLASRANQQYQNVSVEELTQQMFDARNMMTACDPR-HGRYLTVA 58
Query: 642 XHXPXSXXMKEVRXSXML 695
M+E + L
Sbjct: 59 AIFRGKMSMRESATATYL 76
Score = 35.9 bits (79), Expect = 0.080
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 497 PVSAPLTXRGSQQYRALTVPELTQQMF 577
P APL R +QQY+ ++V ELTQQMF
Sbjct: 12 PGFAPLASRANQQYQNVSVEELTQQMF 38
>SB_18555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 467 AIPTSAFLHAPVSAPLTXRGSQQYRALTVPELTQQ 571
+IPT+ F PV + L G ++ RAL++ E T +
Sbjct: 26 SIPTNLFTQGPVDSSLEPEGLREIRALSLDEETDE 60
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 29.1 bits (62), Expect = 9.2
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +3
Query: 63 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSD---TV 230
AE CD LQGFQ +R+EY + M T VP+ K +D V
Sbjct: 230 AEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPAHFKDTDQEHNV 288
Query: 231 VEPYNATLSVHQLVENTD 284
N LS Q+ E+ D
Sbjct: 289 KRILNMALSFSQITEHCD 306
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 29.1 bits (62), Expect = 9.2
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +3
Query: 63 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSD---TV 230
AE CD LQGFQ +R+EY + M T VP+ K +D V
Sbjct: 230 AEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPAHFKDTDQEHNV 288
Query: 231 VEPYNATLSVHQLVENTD 284
N LS Q+ E+ D
Sbjct: 289 KRILNMALSFSQITEHCD 306
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,218,583
Number of Sequences: 59808
Number of extensions: 519277
Number of successful extensions: 1301
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4648159692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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