Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H02_e16_16.seq
(1445 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 258 7e-69
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 257 2e-68
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 257 2e-68
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 251 8e-67
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 251 1e-66
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 249 3e-66
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 150 2e-36
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 150 2e-36
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 117 2e-26
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 110 2e-24
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 110 2e-24
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 110 2e-24
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 110 3e-24
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 110 3e-24
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 109 4e-24
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 109 4e-24
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 109 4e-24
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 109 4e-24
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 109 5e-24
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 108 8e-24
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 108 8e-24
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 108 8e-24
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 107 2e-23
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 98 2e-20
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 84 3e-16
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 84 3e-16
U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis... 31 2.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 258 bits (632), Expect = 7e-69
Identities = 136/224 (60%), Positives = 144/224 (64%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVD+ L VVRKEAESCDCLQGFQ KIREEYPDRIM
Sbjct: 105 HYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGD
Sbjct: 165 MTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGD 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVS+ + P + KLAVNMVPFPRLHFFMP F P
Sbjct: 225 LNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLTSRGSQQYRS 283
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEV 677
P + AKNMM R GR LTV MKEV
Sbjct: 284 LTVPELTQQMFDAKNMMAACDPR-HGRYLTVAAMFRGRMSMKEV 326
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 257 bits (629), Expect = 2e-68
Identities = 144/262 (54%), Positives = 152/262 (58%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVD+ L VVRKEAES DCLQGFQ KIREEYPDRIM
Sbjct: 105 HYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
NT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGD
Sbjct: 165 NTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGD 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVS + P + KLAVNMVPFPRLHFFMP F P
Sbjct: 225 LNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLTSRSNQQYRA 283
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEVRXSXMLXFQXXEXXXX 725
P +C AKNMM R GR LT MKEV ML Q
Sbjct: 284 ITVPELTQQCFDAKNMMAACDPR-HGRYLTAAAIFRGRMSMKEV-DEQMLNIQNKNSSYF 341
Query: 726 XXGMDXRTXXKNXX*XDXPPRG 791
+D D PPRG
Sbjct: 342 ---VDWIPNNVKTAVCDIPPRG 360
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 257 bits (629), Expect = 2e-68
Identities = 144/262 (54%), Positives = 152/262 (58%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVD+ L VVRKEAES DCLQGFQ KIREEYPDRIM
Sbjct: 105 HYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
NT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGD
Sbjct: 165 NTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGD 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVS + P + KLAVNMVPFPRLHFFMP F P
Sbjct: 225 LNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLTSRSNQQYRA 283
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEVRXSXMLXFQXXEXXXX 725
P +C AKNMM R GR LT MKEV ML Q
Sbjct: 284 ITVPELTQQCFDAKNMMAACDPR-HGRYLTAAAIFRGRMSMKEV-DEQMLNIQNKNSSYF 341
Query: 726 XXGMDXRTXXKNXX*XDXPPRG 791
+D D PPRG
Sbjct: 342 ---VDWIPNNVKTAVCDIPPRG 360
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 251 bits (615), Expect = 8e-67
Identities = 133/229 (58%), Positives = 143/229 (62%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVD+ L VVRKEAE CDCLQGFQ KIREEYPDRIM
Sbjct: 105 HYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLS PTYGD
Sbjct: 165 SSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGD 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVS+ + P + KLAVNMVPFPRLHFFMP F P
Sbjct: 225 LNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLSAKGAQAYRA 283
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEVRXSXM 692
+ AKNMM R GR LTV M+EV M
Sbjct: 284 LTVAELTQQMFDAKNMMAACDPR-HGRYLTVAAMFRGRMSMREVDDQMM 331
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 251 bits (614), Expect = 1e-66
Identities = 131/224 (58%), Positives = 142/224 (63%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVD+ L V+RKEAE CDCLQGFQ KIREEYPDRIM
Sbjct: 105 HYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGD
Sbjct: 165 SSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGD 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVSL + P + KLAVNMVPFPRLHFFMP F P
Sbjct: 225 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLSAKGTQAYRA 283
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEV 677
+ AKNMM R GR LTV M+EV
Sbjct: 284 LTVAELTQQMFDAKNMMAACDPR-HGRYLTVAAMFRGRMSMREV 326
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 249 bits (610), Expect = 3e-66
Identities = 130/224 (58%), Positives = 142/224 (63%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYTEGAELVD+ L V+RKEAE CDCLQGFQ KIREE+PDRIM
Sbjct: 105 HYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIM 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGD
Sbjct: 165 SSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGD 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRFRLPXXXXXXXXXXX 545
LNHLVSL + P + KLAVNMVPFPRLHFFMP F P
Sbjct: 225 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLSAKGAQAYRA 283
Query: 546 XPFPSSHSRCSXAKNMMGRXXTRVTGRXLTVGXHXPXSXXMKEV 677
+ AKNMM R GR LTV M+EV
Sbjct: 284 LTVAELTQQMFDAKNMMAACDPR-HGRYLTVAAMFRGRMSMREV 326
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 150 bits (364), Expect = 2e-36
Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
+Y +GAE+VD L V+R+EAE+ D L+GFQ K+REEY D+ +
Sbjct: 105 YYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTL 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL-STPTYG 362
+T S++PS KVSDTVVEPYNA LS+ L++N DE +CIDNEA++DIC LKL + TYG
Sbjct: 165 STCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYG 224
Query: 363 DLNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
DLNHL SL + +++ KL N PRLHFFM F
Sbjct: 225 DLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSF 269
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 150 bits (364), Expect = 2e-36
Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
+Y +GAE+VD L V+R+EAE+ D L+GFQ K+REEY D+ +
Sbjct: 105 YYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTL 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL-STPTYG 362
+T S++PS KVSDTVVEPYNA LS+ L++N DE +CIDNEA++DIC LKL + TYG
Sbjct: 165 STCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYG 224
Query: 363 DLNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
DLNHL SL + +++ KL N PRLHFFM F
Sbjct: 225 DLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSF 269
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 117 bits (281), Expect = 2e-26
Identities = 54/161 (33%), Positives = 91/161 (56%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D+ L +R+ A +C+ LQGF ++ EY +
Sbjct: 104 HYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSK 163
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P++S +VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L++S PTY +
Sbjct: 164 LEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNN 223
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN ++S + ++ + N+VP+PR+HF
Sbjct: 224 LNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHF 264
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 110 bits (265), Expect = 2e-24
Identities = 53/161 (32%), Positives = 87/161 (54%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D+ L +R+ A++C LQGF ++ +Y +
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 165 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTN 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN ++S + ++ + N+VP+PR+HF
Sbjct: 225 LNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHF 265
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 110 bits (265), Expect = 2e-24
Identities = 53/161 (32%), Positives = 87/161 (54%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D+ L +R+ A++C LQGF ++ +Y +
Sbjct: 105 HYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 165 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTN 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN ++S + ++ + N+VP+PR+HF
Sbjct: 225 LNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHF 265
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 110 bits (265), Expect = 2e-24
Identities = 53/161 (32%), Positives = 87/161 (54%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D+ L +R+ A++C LQGF ++ +Y +
Sbjct: 105 HYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 165 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTN 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN ++S + ++ + N+VP+PR+HF
Sbjct: 225 LNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHF 265
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 110 bits (264), Expect = 3e-24
Identities = 53/161 (32%), Positives = 87/161 (54%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D+ L +R+ A++C LQGF ++ +Y +
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 165 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTN 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN ++S + ++ + N+VP+PR+HF
Sbjct: 225 LNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHF 265
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 110 bits (264), Expect = 3e-24
Identities = 53/161 (32%), Positives = 87/161 (54%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D+ L +R+ A++C LQGF ++ +Y +
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 165 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTN 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN ++S + ++ + N+VP+PR+HF
Sbjct: 225 LNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHF 265
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 109 bits (263), Expect = 4e-24
Identities = 53/166 (31%), Positives = 88/166 (53%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D L +R+ A++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTN 226
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
LN L+ + ++ + N+VP+PR+HF + F
Sbjct: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATF 272
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 109 bits (263), Expect = 4e-24
Identities = 53/166 (31%), Positives = 88/166 (53%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D L +R+ A++C LQGF ++ +Y +
Sbjct: 106 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 165
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +
Sbjct: 166 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTN 225
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
LN L+ + ++ + N+VP+PR+HF + F
Sbjct: 226 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATF 271
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 109 bits (263), Expect = 4e-24
Identities = 53/166 (31%), Positives = 88/166 (53%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D L +R+ A++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTN 226
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
LN L+ + ++ + N+VP+PR+HF + F
Sbjct: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATF 272
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 109 bits (263), Expect = 4e-24
Identities = 53/166 (31%), Positives = 88/166 (53%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D L +R+ A++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTN 226
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHFFMPRF 503
LN L+ + ++ + N+VP+PR+HF + F
Sbjct: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATF 272
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 109 bits (262), Expect = 5e-24
Identities = 53/161 (32%), Positives = 88/161 (54%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D L +RK+ E+C+ LQGF ++ E+ +
Sbjct: 110 HYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSK 169
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+SV P+P+VS +VVEPYN+ L+ H +E +D ++ +DNEA+YD+C + L + P+Y +
Sbjct: 170 LEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSN 229
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L++ + ++ + N+VP+PR+HF
Sbjct: 230 LNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHF 270
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 108 bits (260), Expect = 8e-24
Identities = 54/160 (33%), Positives = 88/160 (55%)
Frame = +3
Query: 9 YTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 188
YT G E++D + V++ AE+C+ LQGF ++ EY +
Sbjct: 114 YTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKL 173
Query: 189 TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 368
+++ P+P+VS ++VEPYN+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +L
Sbjct: 174 EFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNL 233
Query: 369 NHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
N LV+ + ++ + N+VP+PR+HF
Sbjct: 234 NRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHF 273
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 108 bits (260), Expect = 8e-24
Identities = 52/161 (32%), Positives = 86/161 (53%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D+ L +R+ A++C LQGF ++ +Y +
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P+V VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 165 LEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTN 224
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN ++S + ++ + N+VP+PR+HF
Sbjct: 225 LNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHF 265
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 108 bits (260), Expect = 8e-24
Identities = 54/160 (33%), Positives = 88/160 (55%)
Frame = +3
Query: 9 YTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 188
YT G E++D + V++ AE+C+ LQGF ++ EY +
Sbjct: 86 YTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKL 145
Query: 189 TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 368
+++ P+P+VS ++VEPYN+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +L
Sbjct: 146 EFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNL 205
Query: 369 NHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
N LV+ + ++ + N+VP+PR+HF
Sbjct: 206 NRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHF 245
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 107 bits (257), Expect = 2e-23
Identities = 52/161 (32%), Positives = 87/161 (54%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G E++D + VR+ E+C LQGF ++ +Y +
Sbjct: 112 HYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSK 171
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+ + P+P+VS ++VEPYN+ L+ H +E++D ++ +DNEA+YDIC R L L+ PTY +
Sbjct: 172 LEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTN 231
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L++ + ++ + N+VP+PR+HF
Sbjct: 232 LNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHF 272
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 97.9 bits (233), Expect = 2e-20
Identities = 49/161 (30%), Positives = 84/161 (52%)
Frame = +3
Query: 6 HYTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 185
HYT G EL+D + VR+ E C LQGF ++ +Y +
Sbjct: 107 HYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAK 166
Query: 186 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
+S+ P+P++S ++VEPYN+ L+ H +E++D ++ +DNEA+Y+I L + +PTY
Sbjct: 167 LEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTH 226
Query: 366 LNHLVSLDHVWRYHLSQVPWSVECGSPKLAVNMVPFPRLHF 488
LN L++ + ++ + N+VP+PR+HF
Sbjct: 227 LNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 83.8 bits (198), Expect = 3e-16
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Frame = +3
Query: 9 YTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 188
Y +G E+ + + ++ +EAE+ + L G ++RE +P +++
Sbjct: 110 YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQ 169
Query: 189 TYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
TYSV + S D VV PYN LS+ +L+EN D +DN AL+ + K TPT+
Sbjct: 170 TYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDH 229
Query: 366 LNHLVSLDHVWRYHLSQVPW---SVECGSPKLAVNMVPFPRLHF 488
+N LV+ S P+ S C S + +++ PFP +HF
Sbjct: 230 INSLVAR----IMSTSTAPYRFNSAMCPSIRY-LDLAPFPPMHF 268
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 83.8 bits (198), Expect = 3e-16
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Frame = +3
Query: 9 YTEGAELVDSXLXVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 188
Y +G E+ + + ++ +EAE+ + L G ++RE +P +++
Sbjct: 110 YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQ 169
Query: 189 TYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 365
TYSV + S D VV PYN LS+ +L+EN D +DN AL+ + K TPT+
Sbjct: 170 TYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDH 229
Query: 366 LNHLVSLDHVWRYHLSQVPW---SVECGSPKLAVNMVPFPRLHF 488
+N LV+ S P+ S C S + +++ PFP +HF
Sbjct: 230 INSLVAR----IMSTSTAPYRFNSAMCPSIRY-LDLAPFPPMHF 268
>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
transmembrane conductanceregulator homolog protein 1
protein.
Length = 1247
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 455 CQLRRSAFN*PGNLRQVVTPDMVKRHQVVQVAIC 354
CQLR + P L Q+V+P+ + Q QV +C
Sbjct: 1125 CQLREYVKSLPDGLHQMVSPEKMSNEQKCQVNVC 1158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,340,316
Number of Sequences: 27780
Number of extensions: 383776
Number of successful extensions: 802
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4131451166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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