Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_G12_e95_14.seq
(1534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 191 1e-48
02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283... 180 2e-45
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075... 167 3e-41
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 146 4e-35
09_02_0241 + 6179869-6180116,6180406-6180436,6182038-6182190,618... 95 2e-19
10_07_0165 + 13740611-13740706,13741159-13741215,13741523-137416... 85 2e-16
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 85 2e-16
03_01_0473 - 3639533-3639598,3639848-3639955,3640037-3640126,364... 85 2e-16
08_02_0893 + 22327485-22327671,22327756-22328627 83 4e-16
03_06_0366 + 33408671-33408745,33409342-33409398,33410398-334104... 83 6e-16
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 81 2e-15
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 81 3e-15
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 78 2e-14
01_06_0339 + 28549449-28549529,28549768-28549914,28550027-285500... 77 5e-14
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 74 3e-13
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 53 5e-07
08_02_1232 + 25429955-25430392,25430885-25431388,25432657-254328... 39 0.009
12_02_1174 - 26696869-26698191 30 4.2
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 29 7.4
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 191 bits (465), Expect = 1e-48
Identities = 85/114 (74%), Positives = 97/114 (85%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDPDK+++GWGENDRGVS+TFG D V++FL HDLDLICRAHQVVEDGYEFFAKRQLVT+
Sbjct: 221 SDPDKEIEGWGENDRGVSYTFGADKVAEFLQTHDLDLICRAHQVVEDGYEFFAKRQLVTI 280
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPATPQR 431
FSAPNYCGEFDNAG MMS+D++L CSFQILKPS+KK K N +P TP R
Sbjct: 281 FSAPNYCGEFDNAGAMMSIDDSLTCSFQILKPSDKKGKAGTG--NMSKPGTPPR 332
>02_05_1246 -
35226759-35226860,35227521-35227715,35227804-35228363,
35229299-35229476
Length = 344
Score = 180 bits (439), Expect = 2e-45
Identities = 79/95 (83%), Positives = 85/95 (89%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDP D QGW NDRGVS+TFGPD VS+FL +HDLDLICRAHQVVEDGYEFFA RQLVT+
Sbjct: 204 SDPSNDAQGWAMNDRGVSYTFGPDKVSEFLEKHDLDLICRAHQVVEDGYEFFANRQLVTI 263
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK 374
FSAPNYCGEFDNAG MMSVD+TLMCSFQILKP+ K
Sbjct: 264 FSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPARK 298
>01_03_0220 -
13905808-13905831,13906694-13906885,13906960-13907519,
13910007-13910187
Length = 318
Score = 167 bits (405), Expect = 3e-41
Identities = 73/111 (65%), Positives = 91/111 (81%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDP D +GWGE+DRGVS TFG D + +FL ++DLDLICRAHQVVEDGYEFFA+R+LVT+
Sbjct: 205 SDPSPDSEGWGESDRGVSCTFGADKLVEFLEKNDLDLICRAHQVVEDGYEFFAQRRLVTI 264
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPAT 422
FSAPNYCGEFDNAG ++S+DE+LMCSFQILKP++ A + ++ P T
Sbjct: 265 FSAPNYCGEFDNAGALLSIDESLMCSFQILKPNDTGAPHSRKPTSNKTPKT 315
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 146 bits (354), Expect = 4e-35
Identities = 64/74 (86%), Positives = 68/74 (91%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDP KDVQGWG NDRGVS+TFG D VS+FL +HDLDLICRAHQVVEDGYEFFA RQLVT+
Sbjct: 296 SDPGKDVQGWGMNDRGVSYTFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFADRQLVTI 355
Query: 270 FSAPNYCGEFDNAG 311
FSAPNYCGEFDNAG
Sbjct: 356 FSAPNYCGEFDNAG 369
>09_02_0241 +
6179869-6180116,6180406-6180436,6182038-6182190,
6182921-6182983,6183396-6183664,6184055-6184133,
6184213-6184263
Length = 297
Score = 94.7 bits (225), Expect = 2e-19
Identities = 43/110 (39%), Positives = 69/110 (62%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDP+ V GWG + RG F FG +VVS F + +++D ICRAHQ+V +G+++ ++VT+
Sbjct: 187 SDPEDAVDGWGLSPRGAGFLFGGNVVSSFNHTNNIDYICRAHQLVMEGFKWMFNNKIVTV 246
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPA 419
+SAPNYC N ++ +DE L F++ + A ++ G+ + RPA
Sbjct: 247 WSAPNYCYRCGNVAAILELDENLNKQFRVF----EAAPHESRGVPAKRPA 292
>10_07_0165 +
13740611-13740706,13741159-13741215,13741523-13741681,
13742315-13742398,13742496-13742567,13742810-13742881,
13743085-13743125,13743296-13743362,13744033-13744224,
13744314-13744403,13744742-13744849,13745089-13745154
Length = 367
Score = 84.6 bits (200), Expect = 2e-16
Identities = 38/98 (38%), Positives = 63/98 (64%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDPD D GWG + RG +TFG D+ +F + ++L L+ RAHQ+V +GY + ++++VT+
Sbjct: 259 SDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLVARAHQLVMEGYNWAHEQKVVTI 317
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 383
FSAPNYC N ++ VD+ +F +P+ ++ +
Sbjct: 318 FSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGE 355
>03_05_0488 - 24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 84.6 bits (200), Expect = 2e-16
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Frame = +3
Query: 90 SDPDKD--VQGWGENDRGVSF-TFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQL 260
SDP ++ V+G N RG TFGPD V +F N +DL LI RAH+ V DG+E FA+ L
Sbjct: 838 SDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHL 897
Query: 261 VTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKP 365
+TLFSA NYCG +NAG ++ + L+ +++ P
Sbjct: 898 ITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 932
>03_01_0473 -
3639533-3639598,3639848-3639955,3640037-3640126,
3640203-3640394,3640952-3641018,3641472-3641512,
3641762-3641779,3641984-3642055,3642154-3642237,
3642296-3642373,3642703-3642759,3643374-3643469
Length = 322
Score = 84.6 bits (200), Expect = 2e-16
Identities = 38/98 (38%), Positives = 63/98 (64%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDPD D GWG + RG +TFG D+ +F + ++L L+ RAHQ+V +GY + ++++VT+
Sbjct: 214 SDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLVARAHQLVMEGYNWAHEQKVVTI 272
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 383
FSAPNYC N ++ VD+ +F +P+ ++ +
Sbjct: 273 FSAPNYCYRCGNMASILEVDDCNSHTFIQFEPAPRRGE 310
>08_02_0893 + 22327485-22327671,22327756-22328627
Length = 352
Score = 83.4 bits (197), Expect = 4e-16
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQ 218
SDPD++ GWGENDRGVSFTFG D V++FLN+HDLDLICRAHQ
Sbjct: 207 SDPDRESSGWGENDRGVSFTFGADKVTEFLNKHDLDLICRAHQ 249
>03_06_0366 +
33408671-33408745,33409342-33409398,33410398-33410481,
33410575-33410646,33410768-33410839,33411011-33411051,
33411517-33411583,33411673-33411864,33411947-33412036,
33412111-33412218,33412513-33412578
Length = 307
Score = 83.0 bits (196), Expect = 6e-16
Identities = 38/98 (38%), Positives = 63/98 (64%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDPD D GWG + RG +TFG D+ +F + ++L LI RAHQ+V +G+ + ++++VT+
Sbjct: 199 SDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTI 257
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 383
FSAPNYC N ++ VD+ +F +P+ ++ +
Sbjct: 258 FSAPNYCYRCGNMASILEVDDCREHTFIQFEPAPRRGE 295
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 81.0 bits (191), Expect = 2e-15
Identities = 37/96 (38%), Positives = 58/96 (60%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDPD D GWG + RG +TFG D+ +F + + L LI RAHQ+V +G+ + + +VT+
Sbjct: 199 SDPD-DRCGWGISPRGAGYTFGQDIAQQFNHTNGLSLISRAHQLVMEGFNWCQDKNVVTV 257
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 377
FSAPNYC N ++ + E + +F P+ ++
Sbjct: 258 FSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQ 293
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 80.6 bits (190), Expect = 3e-15
Identities = 37/96 (38%), Positives = 58/96 (60%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDPD D GWG + RG +TFG D+ +F + + L LI RAHQ+V +G+ + + +VT+
Sbjct: 198 SDPD-DRCGWGISPRGAGYTFGQDIAQQFNHTNGLTLISRAHQLVMEGFNWCQDKNVVTV 256
Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 377
FSAPNYC N ++ + E + +F P+ ++
Sbjct: 257 FSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQ 292
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 78.2 bits (184), Expect = 2e-14
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
SDP + G G + RGV +FG DV KFL ++LDL+ R+H+V ++GYE +L+T+
Sbjct: 372 SDPQPQL-GRGPSKRGVGLSFGADVTKKFLQENNLDLVVRSHEVKDEGYEIEHDGKLITV 430
Query: 270 FSAPNYCGEFDNAG 311
FSAPNYC + N G
Sbjct: 431 FSAPNYCDQMGNKG 444
>01_06_0339 +
28549449-28549529,28549768-28549914,28550027-28550094,
28550771-28550828,28551474-28551584,28551668-28551718,
28552308-28552451,28552570-28552665,28552781-28552852,
28553392-28553475
Length = 303
Score = 76.6 bits (180), Expect = 5e-14
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEF-FAKRQLVT 266
SDP+ +++ W + RG + FG V ++F + ++LDL+CRAHQ+V++G ++ F + LVT
Sbjct: 194 SDPE-EIETWAVSPRGAGWLFGSRVTAEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVT 252
Query: 267 LFSAPNYCGEFDNAGGMMSVDETL 338
++SAPNYC N ++S ET+
Sbjct: 253 VWSAPNYCYRCGNVASILSFSETM 276
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 73.7 bits (173), Expect = 3e-13
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Frame = +3
Query: 90 SDPDKD--VQGWGENDRGVSF-TFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQL 260
SDP ++ V+G N RG TFGPD V++F R+ L LI RAH+ V DG+E FA QL
Sbjct: 708 SDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKRNRLQLIIRAHECVMDGFERFAHGQL 767
Query: 261 VTLFSAPNYCG 293
+TLFSA NYCG
Sbjct: 768 ITLFSATNYCG 778
>12_02_1128 - 26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 53.2 bits (122), Expect = 5e-07
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +3
Query: 90 SDPDKD--VQGWGENDRGVSF-TFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAK 251
SDP ++ V+G N RG TFGPD V +F N +DL LI RAH+ V DG+E FA+
Sbjct: 850 SDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQ 906
>08_02_1232 +
25429955-25430392,25430885-25431388,25432657-25432803,
25432999-25433106,25433242-25433331
Length = 428
Score = 39.1 bits (87), Expect = 0.009
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 15/81 (18%)
Frame = +3
Query: 90 SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQ------------VVEDG 233
SDP ++ +RG+ +GPD+ +FL ++L LI R+H+ +++G
Sbjct: 279 SDPSLEMGLSSNKERGIGLLWGPDITQQFLYTNNLKLIIRSHEGPDARDKRHDLLGMDNG 338
Query: 234 Y---EFFAKRQLVTLFSAPNY 287
Y +L+TLFSAP+Y
Sbjct: 339 YTIDHHVECGKLITLFSAPDY 359
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 166 TTSGPNVKDTPRSFSPQPCTSLSGSDPR 83
++S P+ KD+PR P P + +G DPR
Sbjct: 333 SSSPPSTKDSPRPPLPAPSPAANGGDPR 360
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 29.5 bits (63), Expect = 7.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 136 PRSFSPQPCTSLSGSDPRAEFPAAPXXXH 50
PR F+P P GS P+AE P P +
Sbjct: 3759 PREFTPYPSVEDQGSAPKAEEPLPPTTAN 3787
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,378,667
Number of Sequences: 37544
Number of extensions: 608834
Number of successful extensions: 1457
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4930895900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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