Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G12_e95_14.seq
         (1534 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)             243   3e-64
SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)      219   4e-57
SB_19115| Best HMM Match : No HMM Matches (HMM E-Value=.)             157   3e-38
SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)                   123   4e-28
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)           83   4e-16
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)              73   5e-13
SB_9847| Best HMM Match : No HMM Matches (HMM E-Value=.)               66   7e-11
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)           64   4e-10
SB_3587| Best HMM Match : No HMM Matches (HMM E-Value=.)               55   1e-07
SB_24589| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   1.1  
SB_10898| Best HMM Match : Galactosyl_T (HMM E-Value=1.9e-22)          30   5.7  
SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.5  
SB_13608| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.5  

>SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 204

 Score =  243 bits (594), Expect = 3e-64
 Identities = 109/120 (90%), Positives = 111/120 (92%)
 Frame = +3

Query: 90  SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
           SDPDKD  GWGENDRGVSFTFG DVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL
Sbjct: 80  SDPDKDTNGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 139

Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPATPQRSPPKKK 449
           FSAPNYCGEFDNAGGMMSVD+TLMCSFQILKPSEKKAKYQY G+NSGRP TP R P  KK
Sbjct: 140 FSAPNYCGEFDNAGGMMSVDDTLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRGPQNKK 199


>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
          Length = 293

 Score =  219 bits (536), Expect = 4e-57
 Identities = 98/116 (84%), Positives = 107/116 (92%)
 Frame = +3

Query: 99  DKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 278
           DKDVQGWGENDRGVSFTFGPD+V+KFL++HDLDLICRAHQVVEDGYEFFAKRQLVTLFSA
Sbjct: 175 DKDVQGWGENDRGVSFTFGPDIVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 234

Query: 279 PNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPATPQRSPPKK 446
           PNYCGEFDNAG MMSVDETLMCSFQILKP++KK K+ Y G+NSGRP TP R   +K
Sbjct: 235 PNYCGEFDNAGAMMSVDETLMCSFQILKPADKK-KFPYGGLNSGRPVTPPRGQQQK 289


>SB_19115| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 121

 Score =  157 bits (380), Expect = 3e-38
 Identities = 74/104 (71%), Positives = 82/104 (78%)
 Frame = +3

Query: 138 VSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGM 317
           +SF    + +++ L R   D      +VVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGM
Sbjct: 13  MSFVIFGEKLAEKLERTARDSTLYYRKVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGM 72

Query: 318 MSVDETLMCSFQILKPSEKKAKYQYNGINSGRPATPQRSPPKKK 449
           MSVD+TLMCSFQILKPSEKKAKYQY G+NSGRP TP R P  KK
Sbjct: 73  MSVDDTLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRGPQNKK 116


>SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)
          Length = 465

 Score =  123 bits (296), Expect = 4e-28
 Identities = 59/99 (59%), Positives = 70/99 (70%)
 Frame = +3

Query: 90  SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
           SDPD+D+ GWG+NDRGVS+TFG DVV ++L ++   L+ RAHQ             LVTL
Sbjct: 132 SDPDEDITGWGDNDRGVSWTFGGDVVREYLEKYGFSLVVRAHQ-------------LVTL 178

Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKY 386
           FSAPNYCGEFDNAGG+MSV E LMCSF ILKP +    Y
Sbjct: 179 FSAPNYCGEFDNAGGVMSVGENLMCSFSILKPGDFALSY 217


>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
          Length = 199

 Score = 83.4 bits (197), Expect = 4e-16
 Identities = 40/86 (46%), Positives = 53/86 (61%)
 Frame = +3

Query: 90  SDPDKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 269
           SDPD D  GWG + RG  +TFG D+   F + + L LI RAHQ+V +GY +   R +VT+
Sbjct: 114 SDPD-DRGGWGISPRGAGYTFGQDISETFNHTNGLTLITRAHQLVMEGYNWCHDRNVVTI 172

Query: 270 FSAPNYCGEFDNAGGMMSVDETLMCS 347
           FSAPNYC    N   +M +D+ L  S
Sbjct: 173 FSAPNYCYRCGNQAAIMELDDALKYS 198


>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 540

 Score = 73.3 bits (172), Expect = 5e-13
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
 Frame = +3

Query: 114 GWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCG 293
           G   + RGV   FGPD+  KF   + L+LI R+H+V  +GYE     + +T+FSAPNYC 
Sbjct: 370 GRSASKRGVGIQFGPDITEKFCKDNGLELIIRSHEVKPEGYEVMHDGKCITIFSAPNYCD 429

Query: 294 EFDNAGGMMSVDETLMCSF----QILKPSEKKA 380
           +  N G  +++ + L   F     ++ PS ++A
Sbjct: 430 QMGNKGAFITMGDDLKPKFTTYEAVVTPSRREA 462


>SB_9847| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 66.1 bits (154), Expect = 7e-11
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 22/114 (19%)
 Frame = +3

Query: 108 VQGWGENDRGVSFTFGPDVVSK------FLN----------------RHDLDLICRAHQV 221
           +QGWG + RG  + FG DVV++      F+                  +D+DLICRAHQ+
Sbjct: 2   IQGWGVSPRGAGYLFGSDVVAQTYYLFFFIEWDCEIVYALLDFQYNAANDIDLICRAHQL 61

Query: 222 VEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 383
           V +GY++     ++T++SAPNYC    N   ++ +DE L   F I + + +  +
Sbjct: 62  VMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLKREFTIFEAAPQDVR 115


>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
          Length = 417

 Score = 63.7 bits (148), Expect = 4e-10
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = +3

Query: 90  SDPDKDVQGWGEND-RGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVT 266
           SDP K   G   N  RG    FGPDV S+ L +H+ +L+ R+H+   +GYE+   ++++T
Sbjct: 126 SDP-KPTPGCKPNTFRGGGCYFGPDVTSQVLRKHNFELLVRSHECKYEGYEYMHNKKVIT 184

Query: 267 LFSAPNYCGEFDNAGGMMSV 326
           +FSA NY  +  N G  M +
Sbjct: 185 IFSASNYYEQGSNRGAYMKI 204


>SB_3587| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 22/53 (41%), Positives = 37/53 (69%)
 Frame = +3

Query: 174 FLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDE 332
           F++ ++L LICRAHQ+V +GY++    +LVT++SAPNYC    N   +++  +
Sbjct: 1   FVHINNLKLICRAHQLVHEGYKYMFDEKLVTVWSAPNYCYRCGNIASILAFSD 53


>SB_24589| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 209

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 371 EKGKVSVQRYQQWEAGHASTVTTEKEITGIR 463
           EKGK  ++ + QWEAG  S +TT   +   R
Sbjct: 171 EKGKKGIKEFLQWEAGQMSKLTTSDTVINHR 201


>SB_10898| Best HMM Match : Galactosyl_T (HMM E-Value=1.9e-22)
          Length = 301

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -3

Query: 908 RGHHRKTMYXNLAKTFFXXRIYAQRFXPQFXLMLSDDVVQH 786
           RG++ +T    + K F+  + +A +F P++ L + DDV  H
Sbjct: 150 RGNYEETYRNIVVKVFYAFK-WALQFKPKYILKVDDDVYAH 189


>SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1220

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 99  DKDVQGWGENDRGVSFTFGPDVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQL 260
           D    G  E  +GV F   P V+   L R   D +  A+  + D YEF+ K  L
Sbjct: 406 DAGEHGLQEAKKGVMFKKFPPVLHLQLMRFQYDPVADANVKINDRYEFYDKIDL 459


>SB_13608| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 587

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 360 KPSEKKAKYQYNGINSGRPATPQ 428
           K S + A+ Q+NG+N G  ATP+
Sbjct: 4   KRSSRHARKQFNGVNGGHSATPR 26


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,499,275
Number of Sequences: 59808
Number of extensions: 654096
Number of successful extensions: 1307
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4988555225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)