BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030623sawa_G11_e87_13.seq (1470 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 256 2e-68 07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 254 1e-67 02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023... 32 1.00 04_01_0253 - 3358090-3359052 31 3.0 02_03_0074 + 14781763-14784191,14784888-14784978,14785180-147852... 29 9.3 >03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701, 4319791-4320053,4320453-4320597 Length = 305 Score = 256 bits (628), Expect = 2e-68 Identities = 119/206 (57%), Positives = 148/206 (71%) Frame = +3 Query: 15 AGIRHXVLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 194 AG L+ +E+DV MLAA HLG +N +FQME YVYKRR DG ++INL +TWEK Sbjct: 5 AGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQL 64 Query: 195 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 374 E+P D+ V S+R +GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPR Sbjct: 65 AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPR 124 Query: 375 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 554 LLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++WLLAR Sbjct: 125 LLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLAR 184 Query: 555 EVLRLRGVLSRDQRWDVVVDLFFYRD 632 VL++RG + +WDV+VDLFFYRD Sbjct: 185 MVLQMRGTILPGHKWDVMVDLFFYRD 210 >07_03_1272 - 25360180-25360286,25360454-25360658,25360748-25360945, 25361034-25361296,25361865-25362009 Length = 305 Score = 254 bits (622), Expect = 1e-67 Identities = 117/205 (57%), Positives = 145/205 (70%) Frame = +3 Query: 18 GIRHXVLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXX 197 G L+ E+D+ MLAA HLG +N +FQME YVYKRR DG ++INL +TWEK Sbjct: 6 GAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLA 65 Query: 198 XXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 377 E+P D+ V S+R +GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRL Sbjct: 66 ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 125 Query: 378 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 557 LI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K SIG ++WLLAR Sbjct: 126 LILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARM 185 Query: 558 VLRLRGVLSRDQRWDVVVDLFFYRD 632 VL++RG + +WDV+VDLFFYRD Sbjct: 186 VLQMRGTILPGHKWDVMVDLFFYRD 210 >02_05_0938 + 32901143-32901215,32901841-32901982,32902243-32902314, 32902573-32902644,32902711-32902782,32902913-32902948, 32903001-32903072,32903319-32903387,32903483-32903554, 32903668-32903739,32903838-32903909,32904153-32904224, 32904470-32904541,32904623-32904694,32904782-32904853, 32904911-32905003,32905150-32905218,32905315-32905386, 32905479-32905552,32905643-32905771,32905966-32906331, 32906584-32906954,32907522-32907890 Length = 884 Score = 32.3 bits (70), Expect = 1.00 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +1 Query: 595 VGMLSLTCSSIVTLKRVRRKSNKLRNRLSSLPKWKRRRQFMRNGLRMLNQLHHGLK 762 VGM+ T S + LK + NKL + L W Q++R + + Q+ GL+ Sbjct: 104 VGMIPSTLSQLPNLKILDLAQNKLNGEIPRLIYWNEVLQYLRLNICNVGQIVRGLR 159 >04_01_0253 - 3358090-3359052 Length = 320 Score = 30.7 bits (66), Expect = 3.0 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Frame = +1 Query: 760 KMQHRHPAAPATFGT-AXHKKTGPVRXKNXGALXRACPCRCSVWGGXAXTG 909 + + R + AT GT TG VR K G R PCRC GG G Sbjct: 68 RRRRRETTSRATDGTMTTTTNTGGVRSK--GRRGRGRPCRCDAGGGDGDVG 116 >02_03_0074 + 14781763-14784191,14784888-14784978,14785180-14785230, 14785882-14785947,14786509-14786610 Length = 912 Score = 29.1 bits (62), Expect = 9.3 Identities = 18/59 (30%), Positives = 22/59 (37%) Frame = -1 Query: 738 QHSQSIPHELAAALPLWERRQPVP*LVALPSHSLQGHDRRTSQRQHPNAGHD*EHHGVS 562 QH Q P ALP P ++ + S H SQ Q P + H HH S Sbjct: 120 QHQQQTPQAALQALPPPNSTASSPIPISSIAPSSPRHPHHHSQPQQPQSHHHHHHHSGS 178 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,846,101 Number of Sequences: 37544 Number of extensions: 591390 Number of successful extensions: 1351 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1350 length of database: 14,793,348 effective HSP length: 85 effective length of database: 11,602,108 effective search space used: 4687251632 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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