BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030623sawa_G11_e87_13.seq (1470 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 260 2e-69 Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 32 1.2 Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 32 1.2 AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 1.2 AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 1.2 AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 1.2 >Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical protein B0393.1 protein. Length = 276 Score = 260 bits (637), Expect = 2e-69 Identities = 117/203 (57%), Positives = 151/203 (74%), Gaps = 5/203 (2%) Frame = +3 Query: 39 ALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 218 AL+EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEK Sbjct: 9 ALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAV 68 Query: 219 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 398 E+PADV V+S+R + QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPRLL++ DP Sbjct: 69 ENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPR 128 Query: 399 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGV 578 DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LARE+L LRG Sbjct: 129 IDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGK 188 Query: 579 LSRDQRW-----DVVVDLFFYRD 632 +SR + +++ DL+FYRD Sbjct: 189 ISRQTGFVLEGKEIMPDLYFYRD 211 >Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein ZK1151.1h protein. Length = 3424 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180 >Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein ZK1151.1a protein. Length = 3436 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192 >Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein ZK1151.1f protein. Length = 3322 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078 >Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein ZK1151.1e protein. Length = 3323 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079 >Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein ZK1151.1d protein. Length = 3405 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161 >Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein ZK1151.1h protein. Length = 3424 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180 >Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein ZK1151.1a protein. Length = 3436 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192 >Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein ZK1151.1f protein. Length = 3322 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078 >Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein ZK1151.1e protein. Length = 3323 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079 >Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein ZK1151.1d protein. Length = 3405 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161 >AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein protein. Length = 3436 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192 >AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein protein. Length = 3436 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192 >AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein protein. Length = 3436 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 252 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 422 +A G L+ A H G+F GA +I A + RL ++ P++ Q +TE Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,089,156 Number of Sequences: 27780 Number of extensions: 451584 Number of successful extensions: 1026 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 952 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1024 length of database: 12,740,198 effective HSP length: 84 effective length of database: 10,406,678 effective search space used: 4214704590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -