Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G10_e79_14.seq
         (1502 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113517-1|AAM29522.1|  738|Drosophila melanogaster RE59932p pro...    31   3.1  
AE014298-1309|AAF46469.1|  738|Drosophila melanogaster CG12121-P...    31   3.1  

>AY113517-1|AAM29522.1|  738|Drosophila melanogaster RE59932p
           protein.
          Length = 738

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
 Frame = +2

Query: 305 SQPATLA--IYDPPSEYTYEIFFSFINKQHLNDDNLEKIRNSATENTDDFESIATNTEQL 478
           S PA +A  I  P  E   ++     N   + ++++ K   +A +N  D + +       
Sbjct: 192 SSPAAVAGKIELPKDEGAPKVDAPAQNVDAVKEESVPKPEVAANQNISDKQELPPPPNAA 251

Query: 479 PTGRNQVKSNSDTHDGDIVKKETPVSRE--LATQKRHIEAQVHIPAVVAKSTGAIP 640
           P     VKS     +    K ETP  +E   A Q    E +V  P +   S  A P
Sbjct: 252 PKVEEAVKSEQKQEEAPAEKDETPSKKEETPAKQVSVEEPKVAAPPLAVNSPAAAP 307


>AE014298-1309|AAF46469.1|  738|Drosophila melanogaster CG12121-PA
           protein.
          Length = 738

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
 Frame = +2

Query: 305 SQPATLA--IYDPPSEYTYEIFFSFINKQHLNDDNLEKIRNSATENTDDFESIATNTEQL 478
           S PA +A  I  P  E   ++     N   + ++++ K   +A +N  D + +       
Sbjct: 192 SSPAAVAGKIELPKDEGAPKVDAPAQNVDAVKEESVPKPEVAANQNISDKQELPPPPNAA 251

Query: 479 PTGRNQVKSNSDTHDGDIVKKETPVSRE--LATQKRHIEAQVHIPAVVAKSTGAIP 640
           P     VKS     +    K ETP  +E   A Q    E +V  P +   S  A P
Sbjct: 252 PKVEEAVKSEQKQEEAPAEKDETPSKKEETPAKQVSVEEPKVAAPPLAVNSPAAAP 307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,871,452
Number of Sequences: 53049
Number of extensions: 932707
Number of successful extensions: 2361
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2361
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8371863072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)