Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_G07_e55_13.seq
(1514 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L02320-1|AAA36541.1| 583|Homo sapiens radixin protein. 35 0.90
U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor... 34 1.2
BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly fact... 34 1.2
AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly fact... 34 1.2
BC150285-1|AAI50286.1| 2058|Homo sapiens myosin X protein. 34 1.6
AF247457-1|AAF68025.2| 2058|Homo sapiens myosin X protein. 34 1.6
AF234532-1|AAF37875.1| 2058|Homo sapiens myosin X protein. 34 1.6
AF132021-1|AAF36524.1| 1540|Homo sapiens myosin X protein. 34 1.6
AB018342-1|BAA34519.2| 2111|Homo sapiens KIAA0799 protein protein. 34 1.6
D67035-1|BAA22586.1| 973|Homo sapiens SCP-1 protein. 33 2.1
CR457254-1|CAG33535.1| 251|Homo sapiens FLJ10350 protein. 33 2.1
BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein. 33 2.1
BC027334-1|AAH27334.1| 216|Homo sapiens MAP7D1 protein protein. 33 2.1
AK095939-1|BAC04654.1| 377|Homo sapiens protein ( Homo sapiens ... 33 2.1
AK001212-1|BAA91557.1| 251|Homo sapiens protein ( Homo sapiens ... 33 2.1
AF218002-1|AAG17244.1| 554|Homo sapiens unknown protein. 33 2.1
AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein. 33 2.1
BC047109-1|AAH47109.1| 583|Homo sapiens radixin protein. 33 2.7
U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein. 32 4.8
U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein. 32 4.8
M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein. 32 4.8
J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein. 32 4.8
BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing ... 32 4.8
BC067349-1|AAH67349.1| 165|Homo sapiens TOP1 protein protein. 32 4.8
BC004475-1|AAH04475.1| 164|Homo sapiens TOP1 protein protein. 32 4.8
AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I p... 32 4.8
AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I p... 32 4.8
AF221130-1|AAF32366.1| 1556|Homo sapiens chromatin remodeling fa... 32 4.8
AF213467-1|AAF70601.1| 1556|Homo sapiens ATP-dependent chromatin... 32 4.8
AB032252-1|BAA89209.1| 1674|Homo sapiens bromodomain adjacent to... 32 4.8
AM177180-1|CAJ45484.1| 1670|Homo sapiens kinesin-like protein KI... 32 6.3
AB007918-1|BAA32294.2| 1628|Homo sapiens KIAA0449 protein protein. 32 6.3
BC090868-1|AAH90868.1| 247|Homo sapiens family with sequence si... 31 8.4
BC062706-1|AAH62706.1| 231|Homo sapiens FAM133B protein protein. 31 8.4
BC017874-1|AAH17874.1| 188|Homo sapiens Unknown (protein for IM... 31 8.4
>L02320-1|AAA36541.1| 583|Homo sapiens radixin protein.
Length = 583
Score = 34.7 bits (76), Expect = 0.90
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +1
Query: 214 EVMKEQLLKAKQFTDDAKKRE--EAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQN 387
E ++ L+ Q ++ KKRE E EK+RIE + L E Q + T ++ +
Sbjct: 311 EEKHQKQLERAQLENEKKKREIAEKEKERIEREKEELMERLKQIEEQT---IKAQKELEE 367
Query: 388 NLTKSVDMTLQKKKVKHDKQELEIDKEQIE 477
K++++ ++K+ K + + LE ++ E
Sbjct: 368 QTRKALELDQERKRAKEEAERLEKERRAAE 397
>U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor-I
p150 subunit protein.
Length = 938
Score = 34.3 bits (75), Expect = 1.2
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 223 KEQLLK-AKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTK 399
KE+L + AK+ ++AKK++E EK+ ++ E K +K KA E + + +
Sbjct: 339 KEKLKEEAKRAKEEAKKKKEEEKE-LKEKERREKREKDEKEKAEKQRLKEERRKERQ--E 395
Query: 400 SVDMTLQKKKVKHDKQELEIDKEQIEITTEKPE 498
+++ L++K+ K +++ L +E+ I EK E
Sbjct: 396 ALEAKLEEKRKKEEEKRLR--EEEKRIKAEKAE 426
>BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly factor
1, subunit A (p150) protein.
Length = 956
Score = 34.3 bits (75), Expect = 1.2
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 223 KEQLLK-AKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTK 399
KE+L + AK+ ++AKK++E EK+ ++ E K +K KA E + + +
Sbjct: 357 KEKLKEEAKRAKEEAKKKKEEEKE-LKEKERREKREKDEKEKAEKQRLKEERRKERQ--E 413
Query: 400 SVDMTLQKKKVKHDKQELEIDKEQIEITTEKPE 498
+++ L++K+ K +++ L +E+ I EK E
Sbjct: 414 ALEAKLEEKRKKEEEKRLR--EEEKRIKAEKAE 444
>AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly
factor-I p150 subunit protein.
Length = 938
Score = 34.3 bits (75), Expect = 1.2
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 223 KEQLLK-AKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTK 399
KE+L + AK+ ++AKK++E EK+ ++ E K +K KA E + + +
Sbjct: 339 KEKLKEEAKRAKEEAKKKKEEEKE-LKEKERREKREKDEKEKAEKQRLKEERRKERQ--E 395
Query: 400 SVDMTLQKKKVKHDKQELEIDKEQIEITTEKPE 498
+++ L++K+ K +++ L +E+ I EK E
Sbjct: 396 ALEAKLEEKRKKEEEKRLR--EEEKRIKAEKAE 426
>BC150285-1|AAI50286.1| 2058|Homo sapiens myosin X protein.
Length = 2058
Score = 33.9 bits (74), Expect = 1.6
Identities = 29/86 (33%), Positives = 45/86 (52%)
Frame = +1
Query: 223 KEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKS 402
+EQ K KQ ++ KKREE E++R E E + Q+ + T E E Q + K
Sbjct: 816 REQEEKKKQEEEEKKKREEEERER--ERERREAELRAQQEEETRKQ-QELEALQKS-QKE 871
Query: 403 VDMTLQKKKVKHDKQELEIDKEQIEI 480
++T + +K K +KQ EI + + EI
Sbjct: 872 AELTRELEKQKENKQVEEILRLEKEI 897
>AF247457-1|AAF68025.2| 2058|Homo sapiens myosin X protein.
Length = 2058
Score = 33.9 bits (74), Expect = 1.6
Identities = 29/86 (33%), Positives = 45/86 (52%)
Frame = +1
Query: 223 KEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKS 402
+EQ K KQ ++ KKREE E++R E E + Q+ + T E E Q + K
Sbjct: 816 REQEEKKKQEEEEKKKREEEERER--ERERREAELRAQQEEETRKQ-QELEALQKS-QKE 871
Query: 403 VDMTLQKKKVKHDKQELEIDKEQIEI 480
++T + +K K +KQ EI + + EI
Sbjct: 872 AELTRELEKQKENKQVEEILRLEKEI 897
>AF234532-1|AAF37875.1| 2058|Homo sapiens myosin X protein.
Length = 2058
Score = 33.9 bits (74), Expect = 1.6
Identities = 29/86 (33%), Positives = 45/86 (52%)
Frame = +1
Query: 223 KEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKS 402
+EQ K KQ ++ KKREE E++R E E + Q+ + T E E Q + K
Sbjct: 816 REQEEKKKQEEEEKKKREEEERER--ERERREAELRAQQEEETRKQ-QELEALQKS-QKE 871
Query: 403 VDMTLQKKKVKHDKQELEIDKEQIEI 480
++T + +K K +KQ EI + + EI
Sbjct: 872 AELTRELEKQKENKQVEEILRLEKEI 897
>AF132021-1|AAF36524.1| 1540|Homo sapiens myosin X protein.
Length = 1540
Score = 33.9 bits (74), Expect = 1.6
Identities = 29/86 (33%), Positives = 45/86 (52%)
Frame = +1
Query: 223 KEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKS 402
+EQ K KQ ++ KKREE E++R E E + Q+ + T E E Q + K
Sbjct: 816 REQEEKKKQEEEEKKKREEEERER--ERERREAELRAQQEEETRKQ-QELEALQKS-QKE 871
Query: 403 VDMTLQKKKVKHDKQELEIDKEQIEI 480
++T + +K K +KQ EI + + EI
Sbjct: 872 AELTRELEKQKENKQVEEILRLEKEI 897
>AB018342-1|BAA34519.2| 2111|Homo sapiens KIAA0799 protein protein.
Length = 2111
Score = 33.9 bits (74), Expect = 1.6
Identities = 29/86 (33%), Positives = 45/86 (52%)
Frame = +1
Query: 223 KEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKS 402
+EQ K KQ ++ KKREE E++R E E + Q+ + T E E Q + K
Sbjct: 869 REQEEKKKQEEEEKKKREEEERER--ERERREAELRAQQEEETRKQ-QELEALQKS-QKE 924
Query: 403 VDMTLQKKKVKHDKQELEIDKEQIEI 480
++T + +K K +KQ EI + + EI
Sbjct: 925 AELTRELEKQKENKQVEEILRLEKEI 950
>D67035-1|BAA22586.1| 973|Homo sapiens SCP-1 protein.
Length = 973
Score = 33.5 bits (73), Expect = 2.1
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +1
Query: 283 EKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKSVDMTLQKKKVKHDKQELEID 462
E+QR+ENYE+ L ++ K T + E K NN K V++ + KKV +K+ L D
Sbjct: 394 EQQRLENYEDQLIILTMELQK-TSSELEEMTKLTNN--KEVELE-ELKKVLGEKETLLYD 449
Query: 463 KEQIEITTEK 492
+Q E E+
Sbjct: 450 NKQFEKIAEE 459
>CR457254-1|CAG33535.1| 251|Homo sapiens FLJ10350 protein.
Length = 251
Score = 33.5 bits (73), Expect = 2.1
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 160 AKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQK 339
A+ + ++A E + +E+L K K+ + A+ REEAE+QR+E ++F + + ++
Sbjct: 59 AEARRREEQEAREKAQAEQEEQERLQKQKEEAE-ARSREEAERQRLEREKHFQQQEQERQ 117
Query: 340 XKATWCD--FPESEKSQNNLTKSVD 408
+ + + KS+ + TK D
Sbjct: 118 ERRKRLEEIMKRTRKSEVSETKKQD 142
>BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein.
Length = 678
Score = 33.5 bits (73), Expect = 2.1
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 160 AKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQK 339
A+ + ++A E + +E+L K K+ + A+ REEAE+QR+E ++F + + ++
Sbjct: 486 AEARRREEQEAREKAQAEQEEQERLQKQKEEAE-ARSREEAERQRLEREKHFQQQEQERQ 544
Query: 340 XKATWCD--FPESEKSQNNLTKSVD 408
+ + + KS+ + TK D
Sbjct: 545 ERRKRLEEIMKRTRKSEVSETKKQD 569
>BC027334-1|AAH27334.1| 216|Homo sapiens MAP7D1 protein protein.
Length = 216
Score = 33.5 bits (73), Expect = 2.1
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 160 AKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQK 339
A+ + ++A E + +E+L K K+ + A+ REEAE+QR+E ++F + + ++
Sbjct: 24 AEARRREEQEAREKAQAEQEEQERLQKQKEEAE-ARSREEAERQRLEREKHFQQQEQERQ 82
Query: 340 XKATWCD--FPESEKSQNNLTKSVD 408
+ + + KS+ + TK D
Sbjct: 83 ERRKRLEEIMKRTRKSEVSETKKQD 107
>AK095939-1|BAC04654.1| 377|Homo sapiens protein ( Homo sapiens
cDNA FLJ38620 fis, clone HEART2007767, weakly similar to
Mus musculus mRNA for E-MAP-115 protein. ).
Length = 377
Score = 33.5 bits (73), Expect = 2.1
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 160 AKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQK 339
A+ + ++A E + +E+L K K+ + A+ REEAE+QR+E ++F + + ++
Sbjct: 185 AEARRREEQEAREKAQAEQEEQERLQKQKEEAE-ARSREEAERQRLEREKHFQQQEQERQ 243
Query: 340 XKATWCD--FPESEKSQNNLTKSVD 408
+ + + KS+ + TK D
Sbjct: 244 ERRKRLEEIMKRTRKSEVSETKKQD 268
>AK001212-1|BAA91557.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ10350 fis, clone NT2RM2001131. ).
Length = 251
Score = 33.5 bits (73), Expect = 2.1
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 160 AKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQK 339
A+ + ++A E + +E+L K K+ + A+ REEAE+QR+E ++F + + ++
Sbjct: 59 AEARRREEQEAREKAQAEQEEQERLQKQKEEAE-ARSREEAERQRLEREKHFQQQEQERQ 117
Query: 340 XKATWCD--FPESEKSQNNLTKSVD 408
+ + + KS+ + TK D
Sbjct: 118 ERRKRLEEIMKRTRKSEVSETKKQD 142
>AF218002-1|AAG17244.1| 554|Homo sapiens unknown protein.
Length = 554
Score = 33.5 bits (73), Expect = 2.1
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 160 AKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQK 339
A+ + ++A E + +E+L K K+ + A+ REEAE+QR+E ++F + + ++
Sbjct: 316 AEARRREEQEAREKAQAEQEEQERLQKQKEEAE-ARSREEAERQRLEREKHFQQQEQERQ 374
Query: 340 XKATWCD--FPESEKSQNNLTKSVD 408
+ + + KS+ + TK D
Sbjct: 375 ERRKRLEEIMKRTRKSEVSETKKQD 399
>AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein.
Length = 813
Score = 33.5 bits (73), Expect = 2.1
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 160 AKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKREEAEKQRIENYENFLXEHKIQK 339
A+ + ++A E + +E+L K K+ + A+ REEAE+QR+E ++F + + ++
Sbjct: 621 AEARRREEQEAREKAQAEQEEQERLQKQKEEAE-ARSREEAERQRLEREKHFQQQEQERQ 679
Query: 340 XKATWCD--FPESEKSQNNLTKSVD 408
+ + + KS+ + TK D
Sbjct: 680 ERRKRLEEIMKRTRKSEVSETKKQD 704
>BC047109-1|AAH47109.1| 583|Homo sapiens radixin protein.
Length = 583
Score = 33.1 bits (72), Expect = 2.7
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +1
Query: 214 EVMKEQLLKAKQFTDDAKKRE--EAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQN 387
E ++ L+ Q ++ +KRE E EK+RIE + L E Q + T ++ +
Sbjct: 311 EEKHQKQLERAQLENEKEKREIAEKEKERIEREKEELMERLKQIEEQT---IKAQKELEE 367
Query: 388 NLTKSVDMTLQKKKVKHDKQELEIDKEQIE 477
K++++ ++K+ K + + LE ++ E
Sbjct: 368 QTRKALELDQERKRAKEEAERLEKERRAAE 397
>U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 DDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKS--QNNLTKSVDMTLQKKK 429
+D+ K ++ K R ++ E +K K + + +SEK + TK D + +K K
Sbjct: 15 NDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHK 74
Query: 430 VKHDKQELEIDKEQ 471
KH ++ E KE+
Sbjct: 75 DKHKDRDKEKRKEE 88
>U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 DDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKS--QNNLTKSVDMTLQKKK 429
+D+ K ++ K R ++ E +K K + + +SEK + TK D + +K K
Sbjct: 15 NDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHK 74
Query: 430 VKHDKQELEIDKEQ 471
KH ++ E KE+
Sbjct: 75 DKHKDRDKEKRKEE 88
>M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein.
Length = 765
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 DDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKS--QNNLTKSVDMTLQKKK 429
+D+ K ++ K R ++ E +K K + + +SEK + TK D + +K K
Sbjct: 19 NDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHK 78
Query: 430 VKHDKQELEIDKEQ 471
KH ++ E KE+
Sbjct: 79 DKHKDRDKEKRKEE 92
>J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein.
Length = 765
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 DDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKS--QNNLTKSVDMTLQKKK 429
+D+ K ++ K R ++ E +K K + + +SEK + TK D + +K K
Sbjct: 19 NDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHK 78
Query: 430 VKHDKQELEIDKEQ 471
KH ++ E KE+
Sbjct: 79 DKHKDRDKEKRKEE 92
>BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing 1
protein.
Length = 841
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +1
Query: 160 AKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKREEAEKQRIENYENF 315
A+ + ++A E + +E+L K K+ + A+ REEAE+QR+E ++F
Sbjct: 648 AEARRREEQEAREKAQAEQEEQERLQKQKEEAE-ARSREEAERQRLEREKHF 698
>BC067349-1|AAH67349.1| 165|Homo sapiens TOP1 protein protein.
Length = 165
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 DDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKS--QNNLTKSVDMTLQKKK 429
+D+ K ++ K R ++ E +K K + + +SEK + TK D + +K K
Sbjct: 19 NDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHK 78
Query: 430 VKHDKQELEIDKEQ 471
KH ++ E KE+
Sbjct: 79 DKHKDRDKEKRKEE 92
>BC004475-1|AAH04475.1| 164|Homo sapiens TOP1 protein protein.
Length = 164
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 DDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKS--QNNLTKSVDMTLQKKK 429
+D+ K ++ K R ++ E +K K + + +SEK + TK D + +K K
Sbjct: 19 NDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHK 78
Query: 430 VKHDKQELEIDKEQ 471
KH ++ E KE+
Sbjct: 79 DKHKDRDKEKRKEE 92
>AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 DDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKS--QNNLTKSVDMTLQKKK 429
+D+ K ++ K R ++ E +K K + + +SEK + TK D + +K K
Sbjct: 19 NDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHK 78
Query: 430 VKHDKQELEIDKEQ 471
KH ++ E KE+
Sbjct: 79 DKHKDRDKEKRKEE 92
>AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 32.3 bits (70), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 DDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKS--QNNLTKSVDMTLQKKK 429
+D+ K ++ K R ++ E +K K + + +SEK + TK D + +K K
Sbjct: 19 NDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHK 78
Query: 430 VKHDKQELEIDKEQ 471
KH ++ E KE+
Sbjct: 79 DKHKDRDKEKRKEE 92
>AF221130-1|AAF32366.1| 1556|Homo sapiens chromatin remodeling
factor WCRF180 protein.
Length = 1556
Score = 32.3 bits (70), Expect = 4.8
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +1
Query: 238 KAKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKSVDMTL 417
KA + D K+EE + E + L K +A + + EK + L K V+
Sbjct: 303 KATKERDKLLKQEEMKSLAFEKAK--LKREKADALEAKKKEKEDKEKKREELKKIVEEER 360
Query: 418 QKKKVKHDKQELEIDKEQIEITTEK 492
KKK + ++ ++E +KE+ ++ EK
Sbjct: 361 LKKKEEKERLKVEREKEREKLREEK 385
>AF213467-1|AAF70601.1| 1556|Homo sapiens ATP-dependent chromatin
remodelling protein protein.
Length = 1556
Score = 32.3 bits (70), Expect = 4.8
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +1
Query: 238 KAKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKSVDMTL 417
KA + D K+EE + E + L K +A + + EK + L K V+
Sbjct: 303 KATKERDKLLKQEEMKSLAFEKAK--LKREKADALEAKKKEKEDKEKKREELKKIVEEER 360
Query: 418 QKKKVKHDKQELEIDKEQIEITTEK 492
KKK + ++ ++E +KE+ ++ EK
Sbjct: 361 LKKKEEKERLKVEREKEREKLREEK 385
>AB032252-1|BAA89209.1| 1674|Homo sapiens bromodomain adjacent to
zinc finger domain 1A protein.
Length = 1674
Score = 32.3 bits (70), Expect = 4.8
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +1
Query: 238 KAKQFTDDAKKREEAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKSVDMTL 417
KA + D K+EE + E + L K +A + + EK + L K V+
Sbjct: 453 KATKERDKLLKQEEMKSLAFEKAK--LKREKADALEAKKKEKEDKEKKREELKKIVEEER 510
Query: 418 QKKKVKHDKQELEIDKEQIEITTEK 492
KKK + ++ ++E +KE+ ++ EK
Sbjct: 511 LKKKEEKERLKVEREKEREKLREEK 535
>AM177180-1|CAJ45484.1| 1670|Homo sapiens kinesin-like protein
KIF21B variant protein.
Length = 1670
Score = 31.9 bits (69), Expect = 6.3
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Frame = +1
Query: 154 ARAKGSKASNEKAPE-DGTPWEVMK---EQLLKAKQFTDDAKKREEAEKQRIENYENFLX 321
AR+ S ++ AP G+P M+ E + +AKQ + KK+E ++++ E F
Sbjct: 511 ARSPYSLGASPAAPAFGGSPASSMEDASEVIRRAKQDLERLKKKEVRQRRKSPEKEAFKK 570
Query: 322 EHKIQKXKATWCDFPESEKSQNNLTKSVDMTLQKKKVKHDKQELEIDKEQIEITTEKPE 498
K+Q+ + D E+E+ + +S ++++ + D+ E +E + + PE
Sbjct: 571 RAKLQQENSEETDENEAEEEEEERDES---GCEEEEGREDEDEDSGSEESLVDSDSDPE 626
>AB007918-1|BAA32294.2| 1628|Homo sapiens KIAA0449 protein protein.
Length = 1628
Score = 31.9 bits (69), Expect = 6.3
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Frame = +1
Query: 154 ARAKGSKASNEKAPE-DGTPWEVMK---EQLLKAKQFTDDAKKREEAEKQRIENYENFLX 321
AR+ S ++ AP G+P M+ E + +AKQ + KK+E ++++ E F
Sbjct: 515 ARSPYSLGASPAAPAFGGSPASSMEDASEVIRRAKQDLERLKKKEVRQRRKSPEKEAFKK 574
Query: 322 EHKIQKXKATWCDFPESEKSQNNLTKSVDMTLQKKKVKHDKQELEIDKEQIEITTEKPE 498
K+Q+ + D E+E+ + +S ++++ + D+ E +E + + PE
Sbjct: 575 RAKLQQENSEETDENEAEEEEEERDES---GCEEEEGREDEDEDSGSEESLVDSDSDPE 630
>BC090868-1|AAH90868.1| 247|Homo sapiens family with sequence
similarity 133, member B protein.
Length = 247
Score = 31.5 bits (68), Expect = 8.4
Identities = 33/169 (19%), Positives = 63/169 (37%)
Frame = +1
Query: 97 KRDNL*THFSKVSVRMTRFARAKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKRE 276
KRDN + + +++ +R + WE +KEQL K K+ +K
Sbjct: 3 KRDNRVAYMNPIAMARSRGPIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKK---GSKALA 59
Query: 277 EAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKSVDMTLQKKKVKHDKQELE 456
E E++ EN++ L +H+ + + + ++ + KS + D
Sbjct: 60 EFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYS-SSSSSSSDSSSSS 118
Query: 457 IDKEQIEITTEKPEXXXXXXXXXXXXXXXXXMQEVQTDSKQTDEQDKLS 603
D E + +K M E ++DSK + ++ K S
Sbjct: 119 SDSEDED---KKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKS 164
>BC062706-1|AAH62706.1| 231|Homo sapiens FAM133B protein protein.
Length = 231
Score = 31.5 bits (68), Expect = 8.4
Identities = 33/169 (19%), Positives = 63/169 (37%)
Frame = +1
Query: 97 KRDNL*THFSKVSVRMTRFARAKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKRE 276
KRDN + + +++ +R + WE +KEQL K K+ +K
Sbjct: 3 KRDNRVAYMNPIAMARSRGPIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKK---GSKALA 59
Query: 277 EAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKSVDMTLQKKKVKHDKQELE 456
E E++ EN++ L +H+ + + + ++ + KS + D
Sbjct: 60 EFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYS-SSSSSSSDSSSSS 118
Query: 457 IDKEQIEITTEKPEXXXXXXXXXXXXXXXXXMQEVQTDSKQTDEQDKLS 603
D E + +K M E ++DSK + ++ K S
Sbjct: 119 SDSEDED---KKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKS 164
>BC017874-1|AAH17874.1| 188|Homo sapiens Unknown (protein for
IMAGE:4697504) protein.
Length = 188
Score = 31.5 bits (68), Expect = 8.4
Identities = 33/169 (19%), Positives = 63/169 (37%)
Frame = +1
Query: 97 KRDNL*THFSKVSVRMTRFARAKGSKASNEKAPEDGTPWEVMKEQLLKAKQFTDDAKKRE 276
KRDN + + +++ +R + WE +KEQL K K+ +K
Sbjct: 3 KRDNRVAYMNPIAMARSRGPIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKK---GSKALA 59
Query: 277 EAEKQRIENYENFLXEHKIQKXKATWCDFPESEKSQNNLTKSVDMTLQKKKVKHDKQELE 456
E E++ EN++ L +H+ + + + ++ + KS + D
Sbjct: 60 EFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYS-SSSSSSSDSSSSS 118
Query: 457 IDKEQIEITTEKPEXXXXXXXXXXXXXXXXXMQEVQTDSKQTDEQDKLS 603
D E + +K M E ++DSK + ++ K S
Sbjct: 119 SDSEDED---KKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKS 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,154,750
Number of Sequences: 237096
Number of extensions: 2057170
Number of successful extensions: 3614
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3603
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22526554074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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