Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_G06_e47_14.seq
(1568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3921| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 3e-28
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 121 2e-27
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 2e-23
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 95 1e-19
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 83 4e-16
SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08) 73 8e-13
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 63 7e-10
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 62 9e-10
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 62 1e-09
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 6e-09
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 1e-07
SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 55 2e-07
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 52 1e-06
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 5e-06
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 50 5e-06
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 7e-06
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 49 9e-06
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 48 3e-05
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 47 5e-05
SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064) 46 8e-05
SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064) 46 8e-05
SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07) 46 1e-04
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-04
SB_43488| Best HMM Match : BRF1 (HMM E-Value=0.41) 44 3e-04
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 44 3e-04
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) 44 3e-04
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 44 3e-04
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 44 3e-04
SB_34575| Best HMM Match : zf-TRAF (HMM E-Value=2.5e-15) 43 6e-04
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 6e-04
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 43 6e-04
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 42 0.001
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 42 0.001
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 42 0.001
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 42 0.001
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.002
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 42 0.002
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 42 0.002
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 42 0.002
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) 41 0.003
SB_20533| Best HMM Match : U-box (HMM E-Value=9.6e-25) 40 0.004
SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01) 40 0.005
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.005
SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12) 40 0.005
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 40 0.007
SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.007
SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05) 40 0.007
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.007
SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.009
SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012) 39 0.009
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 39 0.009
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 39 0.009
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 39 0.013
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.013
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 38 0.017
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 38 0.017
SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028) 38 0.017
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.017
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.029
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 38 0.029
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.029
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.029
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 38 0.029
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.029
SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029) 37 0.038
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.038
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.038
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 37 0.038
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.051
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 37 0.051
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.067
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 36 0.067
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 36 0.089
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.089
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.12
SB_4569| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.12
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.12
SB_55521| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-24) 36 0.12
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 35 0.15
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 35 0.20
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 35 0.20
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 35 0.20
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 35 0.20
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 35 0.20
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 35 0.20
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 35 0.20
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.20
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 35 0.20
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 35 0.20
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.20
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 34 0.27
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.27
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.27
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 34 0.27
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.36
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 34 0.36
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 34 0.36
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.36
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 34 0.36
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 34 0.36
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.36
SB_13095| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.36
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.36
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.47
SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0) 33 0.47
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 33 0.62
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 33 0.82
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 33 0.82
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) 33 0.82
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 32 1.1
SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) 32 1.1
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 32 1.4
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 32 1.4
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 32 1.4
SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23) 31 1.9
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 31 2.5
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 31 2.5
SB_11968| Best HMM Match : zf-TRAF (HMM E-Value=0.32) 31 2.5
SB_42017| Best HMM Match : DUF1421 (HMM E-Value=0.43) 31 3.3
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 30 5.8
SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25) 29 7.7
SB_47089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
SB_44729| Best HMM Match : SET (HMM E-Value=0) 29 7.7
SB_21939| Best HMM Match : F-box (HMM E-Value=0.001) 29 7.7
SB_5526| Best HMM Match : zf-C3HC4 (HMM E-Value=2) 29 7.7
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
>SB_3921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 123 bits (297), Expect = 3e-28
Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 11/169 (6%)
Frame = +3
Query: 441 VLKLDSLANHLVECEFNPKRPMPCEAGCGLVIPKDELADHNCVRELRALIATQQGKLNDY 620
+++LD L +HL +C+ NPKRP+ C+ GCGLV+P DEL HNCVREL +I +Q K+ +
Sbjct: 1 MVRLDGLQSHLAQCDHNPKRPVQCDKGCGLVVPFDELQQHNCVRELNTIIQSQNLKMAEL 60
Query: 621 QLELAEQRLVINEHKRELALLKGIYEGHACIEPYYASSC*PDGTRGSSP---------LG 773
Q ++ +QR +NE KRE+ ++K + I P S P L
Sbjct: 61 QAQIDDQRQQLNEQKREMQMMKEMIRTMRMINVPQTLPALPGPHTHSPPSMIEHNTDELL 120
Query: 774 EFPYHEQESRA--WGGMISTPDDVLQMMIXRSXLRVGMPAFHIDHLMEN 914
E+ Q +R WGGMISTPD VLQ +I R+ G P+ ++ LMEN
Sbjct: 121 EWVLSLQPARVTRWGGMISTPDAVLQAVIRRALADSGCPSNILNELMEN 169
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 121 bits (291), Expect = 2e-27
Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
Frame = +3
Query: 165 MGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
MG++I+RF G V+E L+C IC VLE+PL AP CEH++C AC+ W++ TCP DRQ++
Sbjct: 1 MGYDIERFVGAVNEGLLCCICRDVLEEPLMAP-CEHSYCSACVLGWLTHYNTCPEDRQSL 59
Query: 345 TASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHL-VECEFNPKRPMPC-EA 518
S L+P+ R ++N L L CD+ GC +V++L SLA HL EC+F + C
Sbjct: 60 WPSDLKPIFRYMKNDLDSLKIHCDHQSKGCKSVVRLGSLARHLKEECDF---VAVACPNT 116
Query: 519 GCGLVIPKDELADHNCVRELRALIATQQGKLNDYQLELAEQRLVINEHKRELALLKGIYE 698
GC + + +L H + + + T+ L ELA Q INE + + K ++
Sbjct: 117 GCNESLNRCDLDTHLIICDFQTAKCTRGCGLQVNMNELA-QHNCINELRGSMEKQKSDFQ 175
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 107 bits (258), Expect = 2e-23
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 18/167 (10%)
Frame = +3
Query: 165 MGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
MGF+I+RF V+++ C IC GVLEDPL C H FC C+ WI+ TCP+ + +
Sbjct: 40 MGFDIERFLDPVEDDFKCGICFGVLEDPL-VTTCGHVFCSQCLVHWIAENGTCPLTCEQL 98
Query: 345 TASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEF------------ 488
L+ +P + R L+S L C N GC A+L+++S+ H +C++
Sbjct: 99 AIDDLKKIPPLTR-LISLLNIRCCNFQRGCPAILRIESIQTHQRKCQYAEGLTSGGKIMD 157
Query: 489 NPKRP------MPCEAGCGLVIPKDELADHNCVRELRALIATQQGKL 611
N P + CE GCGL + + +H+C++ L+ IA+ Q KL
Sbjct: 158 NSDSPELSVQVVVCEKGCGLPLLFHDCTEHDCLKALQTHIASLQVKL 204
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 95.5 bits (227), Expect = 1e-19
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Frame = +3
Query: 165 MGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP--TCPVDRQ 338
MG+ + +F G +D+ L+C IC GVLE+ + C H+FC +C+ W+SR +CP R
Sbjct: 1 MGYGLNKFVGKIDQNLLCNICVGVLENAITT-ICGHSFCESCLETWLSRPEVQSCPSCRS 59
Query: 339 AVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEA 518
V + L PV I R L+ L C+NA +GC+ V ++D++ +HL C P + C+A
Sbjct: 60 HVLSLDLIPVHAI-RGLVDGLLVHCENADNGCDIVTRMDNMKSHLESC---PYGLVQCKA 115
Query: 519 GCGLVIPKDELADHNCVRELRALIATQ 599
C + + + +L H+ E+ +AT+
Sbjct: 116 -CEVKVKRIDLQTHHENCEVLNALATK 141
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 83.4 bits (197), Expect = 4e-16
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Frame = +3
Query: 165 MGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQ--------PT 320
MG+ +++F VD L+C IC+ VLE + P C H+FC C+ W++ + +
Sbjct: 1 MGYSVQQFIEKVDPNLLCGICAEVLERAVLTP-CGHSFCGVCLETWMNAKLEENEKCPAS 59
Query: 321 CPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKR 500
CP R + PV LR ++ L C NA +GC VLKL+ + HL C
Sbjct: 60 CPSCRADLYQGDTIPV-LALRGIVDGLIVHCPNADNGCKLVLKLEGVEGHLKSCS---HA 115
Query: 501 PMPCEAGCGLVIPKDELADHN 563
P+ C GC + + ELA+H+
Sbjct: 116 PVQC-CGCSAFLKRGELAEHH 135
>SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08)
Length = 230
Score = 72.5 bits (170), Expect = 8e-13
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +3
Query: 168 GFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISR--QPTCPVDRQA 341
GF+ +G D +ICPIC ++ED + P H FCR+C+ + + CP+DR
Sbjct: 3 GFDPDFVEGPADPNIICPICQFIIEDAVCCPQ-GHIFCRSCVVVHLQQFGNGNCPLDRSE 61
Query: 342 VTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPC-EA 518
++ +RPV ++ +L+ +L + C C +LD H C+ ++P+PC
Sbjct: 62 LSLEDIRPV-LMVNSLVGQLPSLCCEE---CPWRGRLDLRQGHTETCQ---EKPVPCRNV 114
Query: 519 GCGLVIPKDELADH 560
GC ++ + LADH
Sbjct: 115 GCQTLVQRKNLADH 128
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 62.9 bits (146), Expect = 7e-10
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISR---QPTCPVDRQAVTASQLRPVPRIL 380
+ C IC VL P+ P C+H FC CI EW+ + + CPV + +++ L +PR+L
Sbjct: 158 VFCAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVCKASISPGVLHKIPRVL 216
Query: 381 RNLLSRLCTSCDNAPHGCNAVLKLDSLANH 470
N L+ SC C +LD+LA H
Sbjct: 217 GNTLA----SCQVLCRSCKEPRRLDNLAAH 242
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 62.5 bits (145), Expect = 9e-10
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISR---QPTCPVDRQAVTASQLRPVPRIL 380
+ C IC VL P+ P C+H FC CI EW+ + + CPV + +++ L +PR+L
Sbjct: 32 VFCAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVCKASISPGVLHKIPRVL 90
Query: 381 RNLLSRLCTSCDNAPHGCNAVLKLDSLANH 470
N L+ SC C +LD+LA H
Sbjct: 91 GNTLA----SCQVLCRSCKEPHRLDTLAAH 116
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 62.1 bits (144), Expect = 1e-09
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Frame = +3
Query: 174 EIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISR---QPTCPVDRQAV 344
E +RF D + C IC VL P+ P C+H FC CI EW+ + + CPV + ++
Sbjct: 147 ETERFVSPPDF-VFCAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVCKASI 204
Query: 345 TASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEA-- 518
+++ L + R+L N L+ SC C +LD+L H C +P
Sbjct: 205 SSNVLHKIQRVLGNTLA----SCQVLCRSCKEPHRLDTLPAHEAICTTYIAQPATTTVRE 260
Query: 519 --GCGLVIPKDELADHNCVRELRALIATQQ 602
G P ++ D C + ++ ++ Q
Sbjct: 261 ILNAGKDTPLSQVEDRICTQLMKRKLSISQ 290
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 59.7 bits (138), Expect = 6e-09
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISR---QPTCPVDRQAVTASQLRPVPRIL 380
+ C IC VL P+ P C+H FC CI EW+ + + CPV + +++ L +PR+L
Sbjct: 158 VFCAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVCKASISPGVLHKIPRVL 216
Query: 381 RNLLSR---LCTSCDNAPH 428
N L+ LC SC PH
Sbjct: 217 GNTLASCQVLCRSC-KEPH 234
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 55.2 bits (127), Expect = 1e-07
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Frame = +3
Query: 153 KKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVD 332
KK GFE F + + CPIC DP+Q C H FC +C+ P+
Sbjct: 22 KKEAGGFEAD-FVCTIPPDYQCPICQLPFRDPVQTRDCGHRFCESCLE---------PIL 71
Query: 333 RQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPC 512
R+ ++ ++ P R +LS L C N C V +L +L H+ C+ + P+ C
Sbjct: 72 RRCISRDKVYPDKACKRTVLS-LTVKCPNHVTDCEWVGELGNLPVHIEACK---RVPIKC 127
Query: 513 EAGCGLV-IPKDELADHNCVRELRALIAT--QQGKLNDYQLELAEQRLVIN 656
CG I ++E+ + L+ +A+ + +LE ++++ N
Sbjct: 128 VNNCGRTDIAREEVKRIEMEKHLQDSMASHLDMAHIRIRELEQRQEKICTN 178
>SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013)
Length = 499
Score = 54.8 bits (126), Expect = 2e-07
Identities = 28/91 (30%), Positives = 42/91 (46%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILRNL 389
L+C IC GV P+ C+ FC CIT W+ C R + S + P+ L N+
Sbjct: 330 LVCSICMGVPSTPV-VTQCDQIFCSGCITAWLRNAGACSSCRSVLEVSDIDPLKGPLLNI 388
Query: 390 LSRLCTSCDNAPHGCNAVLKLDSLANHLVEC 482
S + C + GC VL + +L ++ C
Sbjct: 389 YSLVKIKCAFSCIGCLEVLAIKNLKDYESLC 419
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +3
Query: 135 VIQSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQ 314
+I+S T + +K+ Q +++EL C +C V DP AC H+FC+ C+ + +S++
Sbjct: 41 IIKSKTLRVSKQSSLKKLQRALNDELRCSVCYEVFSDPRTLTACLHSFCKECLHKMLSKR 100
Query: 315 PT---CPVDRQAVTASQLRPVPRI-LRNLLSRL 401
CP+ R+ TA R V + L +++ RL
Sbjct: 101 SKYIHCPLCRKK-TAVPRRGVKGLPLNSVIRRL 132
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 50.0 bits (114), Expect = 5e-06
Identities = 27/121 (22%), Positives = 50/121 (41%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRI 377
+ ++ IC C G+L P+Q C H C C T+ +S CP + + + +
Sbjct: 425 LQKKYICLDCEGLLWYPVQIKPCGHRVCTKCYTKLLSSSARCPGCMDELN-ENIPDIDKA 483
Query: 378 LRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEAGCGLVIPKDELAD 557
+ L C N C ++ ++H+ +C+++ + CE CG + L
Sbjct: 484 FHEEIQELDVKCRNVEWNCKWEGCVNEFSSHVEKCDYS---DILCENDCGAKFQRRFLTK 540
Query: 558 H 560
H
Sbjct: 541 H 541
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 50.0 bits (114), Expect = 5e-06
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = +3
Query: 150 TKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
TKKA+ K ++++E C +C + C H+FC C+ W+ ++ TCP+
Sbjct: 350 TKKAEEEAR-KSVVEEMEDEFSCIVCQELFIRATTL-TCSHSFCEYCLQSWLRKRNTCPI 407
Query: 330 DRQAVTASQLRPVPRILRNLLSRLCTSCDNA 422
R AV + +R + +L N ++++ S D A
Sbjct: 408 CRCAVQSQPVRSI--VLDNAIAKMVDSMDVA 436
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 49.6 bits (113), Expect = 7e-06
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
D++ +IC +C G L D C H+FCR+CI W+ CPV
Sbjct: 1359 DLNPHIICVLCGGYLVDATTIVECLHSFCRSCIVSWLQASYHCPV 1403
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 49.2 bits (112), Expect = 9e-06
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILR 383
EE C +C + +P+ P C H FCRAC+ + +P CP+ R ++T + + +L+
Sbjct: 375 EEFECTLCCRLFYNPVTTP-CGHVFCRACLNRSLDHRPGCPICRSSLTQNVTVAIEMLLK 433
Query: 384 NLLSR 398
+
Sbjct: 434 TFFPK 438
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP---TCPVDR 335
EE+ CP+C V E+PL P+C H+ C C+ R P CPV R
Sbjct: 19 EEISCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVCR 65
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 46.8 bits (106), Expect = 5e-05
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQ---PTCPVDRQAVTASQLRPV 368
V EE CPIC L+DP C H FC C+T+ I + P CP+ R V ++L V
Sbjct: 61 VSEE--CPICLDPLDDP-SITRCAHVFCTGCLTDVIENEGLAPRCPMCRAPVNQNELVKV 117
Query: 369 P 371
P
Sbjct: 118 P 118
>SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 336
Score = 46.0 bits (104), Expect = 8e-05
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVP 371
GD ++ IC +C V+ P+ P C H+ C +C E ++R+ CP R+ A+
Sbjct: 48 GDAPDDFICNVCGTVMLVPVVMPNCGHSCCSSC-AERVNRK--CPECREEFGATAELKEN 104
Query: 372 RILRNLLSRLCTSCDNAPHGCNAVLKLDSL 461
L+ ++ RL C P L LD L
Sbjct: 105 ISLKRIIRRLQGKCKRCPFNGELGLVLDHL 134
>SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 349
Score = 46.0 bits (104), Expect = 8e-05
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVP 371
GD ++ IC +C V+ P+ P C H+ C +C E ++R+ CP R+ A+
Sbjct: 48 GDAPDDFICNVCGTVMLVPVVMPNCGHSCCSSC-AERVNRK--CPECREEFGATAELKEN 104
Query: 372 RILRNLLSRLCTSCDNAPHGCNAVLKLDSL 461
L+ ++ RL C P L LD L
Sbjct: 105 ISLKRIIRRLQGKCKRCPFNGELGLVLDHL 134
>SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07)
Length = 137
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACI-TEWISRQPTCPVDRQAVTASQLRPVPRILRNL 389
+CP+C + P+Q C H C+ C T W S +P CP ++ V + N
Sbjct: 54 LCPVCEDIFVSPVQIKECGHRLCQHCYKTIWRSPEPKCP-KCSGDLDDKIPDVDQAFEND 112
Query: 390 LSRLCTSCDNAPHGC 434
++ L C N GC
Sbjct: 113 MNELPCRCINHEWGC 127
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 156 KADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+A G+E + F + EE CPIC DP+Q C H FC++C+ E
Sbjct: 7 RATGGYEAE-FVEPLPEEYECPICQLAFRDPIQIEECGHRFCQSCLQE 53
>SB_43488| Best HMM Match : BRF1 (HMM E-Value=0.41)
Length = 301
Score = 44.0 bits (99), Expect = 3e-04
Identities = 21/81 (25%), Positives = 41/81 (50%)
Frame = +3
Query: 456 SLANHLVECEFNPKRPMPCEAGCGLVIPKDELADHNCVRELRALIATQQGKLNDYQLELA 635
S N L + KR + C +GCG+ + +E+ H+C+R+L+ + + L + + +A
Sbjct: 18 SSINSLKDVRRYEKRTLACPSGCGIHLHLNEIPSHDCIRDLKQKVQGMEENLAELESRVA 77
Query: 636 EQRLVINEHKRELALLKGIYE 698
E + +K +L +G E
Sbjct: 78 EMLAIEAYYKDKLTTQEGKME 98
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
+++ +IC +C G L D C H+FCR CI ++ CPV
Sbjct: 41 ELNPHIICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPV 85
>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
Length = 413
Score = 44.0 bits (99), Expect = 3e-04
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP--TCPVDRQAVTAS 353
K F+ + EE+ CPIC+ + E P P C H C +C+ + Q CP+ R+ +
Sbjct: 10 KHFELFLQEEICCPICTEIFETPKCLPVCAHNVCLSCLKKMKIEQGFIKCPICRKKTKIT 69
Query: 354 QLRPVPRILRNLLSRLCTSCDNAP 425
P + N S L +NAP
Sbjct: 70 --NPAESLPTN--SLLVRLVENAP 89
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 44.0 bits (99), Expect = 3e-04
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV-DRQAVTASQ 356
+R Q V L CP CS V++DP P C H+ C+ C+ + ++ CPV AV
Sbjct: 7 ERVQPPVGVSLYCPACSNVIKDPRILP-CLHSICKTCLEKQLNGCLKCPVCSEHAVNIKS 65
Query: 357 LRPV 368
R V
Sbjct: 66 PRDV 69
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
+++ +IC +C G L D C H+FCR CI ++ CPV
Sbjct: 9 ELNPHIICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPV 53
>SB_34575| Best HMM Match : zf-TRAF (HMM E-Value=2.5e-15)
Length = 262
Score = 43.2 bits (97), Expect = 6e-04
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +3
Query: 321 CPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKR 500
CPVD A+ SQ+ + ++ L CD GC +L L HL EC+F
Sbjct: 7 CPVDNTAIDYSQVY-ADDVTNQMIMSLTVICDYYQAGCKWKGQLRKLQGHLAECKF---V 62
Query: 501 PMPCEAGCGLVIPKDELADH 560
C CG I K +++H
Sbjct: 63 SADCSNSCGARIQKRRMSEH 82
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 43.2 bits (97), Expect = 6e-04
Identities = 24/103 (23%), Positives = 42/103 (40%)
Frame = +3
Query: 165 MGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
MG +++ F V E +C C V PL C H C C + + CP+ +++
Sbjct: 1 MGVDLEYFDDPVPSEFLCSYCRKVYLHPL-VTGCGHVLCTKCYNKRSKKHLGCPLCGKSM 59
Query: 345 TASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHL 473
+ + + R R+ +C GC ++ + L HL
Sbjct: 60 GEGKASDLDPMWRRRYERIHVNCTK---GCEQLITIRDLEAHL 99
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 43.2 bits (97), Expect = 6e-04
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
+ P C L + C+H FC CI+ W R+ TCP+ R V +
Sbjct: 482 VMPTCQVKLAKQIMLRTCKHIFCEDCISLWFDREQTCPMCRARVAGDPM 530
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 41.9 bits (94), Expect = 0.001
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRAC---ITEWISRQPTCPVDRQAVT-ASQLRPVP 371
EE C IC VLE PL + C+H+ C C E + P CP+ ++ + + L+ P
Sbjct: 164 EEFHCAICLDVLEKPLSS-KCQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 222
Query: 372 RILRNLLSRLCTSC 413
+L LL C
Sbjct: 223 LVLIQLLEGYLVKC 236
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 41.9 bits (94), Expect = 0.001
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRAC---ITEWISRQPTCPVDRQAVT-ASQLRPVP 371
EE C IC VLE PL + C+H+ C C E + P CP+ ++ + + L+ P
Sbjct: 72 EEFHCAICLDVLEKPLSS-KCQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 130
Query: 372 RILRNLLSRLCTSC 413
+L LL C
Sbjct: 131 LVLIQLLEGYLVKC 144
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISR-QPTCPVDRQAVTA 350
E+ CPIC +L +P+ P CEH FC+ C T+ + CP+ R +++
Sbjct: 33 EDFTCPICLQLLVEPVVLP-CEHEFCKMCFTQNVQEANLQCPMCRIRISS 81
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 204 EELICPICSGVL--EDPLQAPACEHAFCRACITEWISRQPTCPVDRQ 338
E CPIC E P + C H +C C++ W+ TCP+ R+
Sbjct: 258 ESKSCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPICRK 304
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 41.9 bits (94), Expect = 0.001
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRAC---ITEWISRQPTCPVDRQAVT-ASQLRPVP 371
EE C IC VLE PL + C+H+ C C E + P CP+ ++ + + L+ P
Sbjct: 170 EEFHCAICLDVLEKPLSS-KCQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 228
Query: 372 RILRNLLSRLCTSC 413
+L LL C
Sbjct: 229 LVLIQLLEGYLVKC 242
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 41.9 bits (94), Expect = 0.001
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRAC---ITEWISRQPTCPVDRQAVT-ASQLRPV 368
+EE C IC VLE PL + C+H+ C C + + P CP+ ++ + + LR
Sbjct: 20 NEEFHCAICLDVLEKPLSS-KCQHSCCSDCWESAFDLGEKHPACPICQETLADPNDLRRA 78
Query: 369 PRILRNLLSRLCTSC 413
P +L L+ C
Sbjct: 79 PLVLIQLIEGYLVKC 93
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 41.9 bits (94), Expect = 0.001
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACI----TEWISRQPTCPVDRQAVT 347
K G +++E CP+C +P P C H CR C+ T+ S++ CPV R+ T
Sbjct: 11 KTLSGVINDECSCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVCRKEST 70
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRAC---ITEWISRQPTCPVDRQAVT-ASQLRPVP 371
EE C IC VLE PL + C+H+ C C E + P CP+ ++ + + L+ P
Sbjct: 168 EEFHCAICLDVLEKPLSS-KCQHSCCSDCWKSAFELGGKHPACPICQETLADPNDLQRAP 226
Query: 372 RILRNLLSRLCTSC 413
+L LL C
Sbjct: 227 LVLIQLLEGYLIKC 240
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 41.5 bits (93), Expect = 0.002
Identities = 19/65 (29%), Positives = 24/65 (36%)
Frame = +3
Query: 162 DMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQA 341
D ++ + + CPIC + P C H FCR CITE CP R
Sbjct: 660 DSTLDVDMTEDGAGDSAECPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTCRDP 719
Query: 342 VTASQ 356
Q
Sbjct: 720 FGVQQ 724
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 41.5 bits (93), Expect = 0.002
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 171 FEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPT----CPVDR 335
+ + F + +E CP+C V E+P P+C H CR C+ + +R + CP+ R
Sbjct: 7 YTLPDFHTLLGDEGACPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPICR 65
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 41.5 bits (93), Expect = 0.002
Identities = 19/65 (29%), Positives = 24/65 (36%)
Frame = +3
Query: 162 DMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQA 341
D ++ + + CPIC + P C H FCR CITE CP R
Sbjct: 735 DSTLDVDMTEDGAGDSAECPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTCRDP 794
Query: 342 VTASQ 356
Q
Sbjct: 795 FGVQQ 799
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 186 FQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP----TCPVDRQAV 344
F ++ +E+ CPIC E+P P C H CR C+ I + CP+ R V
Sbjct: 15 FHENIQDEISCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICRAIV 71
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
CP+C+ V +P C + FC CI ++ + CPV T QL
Sbjct: 1201 CPLCAKVRTNPTALSTCGYVFCYPCIYRYLGQHGCCPVTHLPSTQQQL 1248
>SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)
Length = 229
Score = 40.7 bits (91), Expect = 0.003
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +3
Query: 180 KRFQ-GDV-DEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTA- 350
KRF+ +V ++ CPICS +L+ P++ H C AC+T+ ++ +CPV + +++
Sbjct: 119 KRFELNEVRKDDFYCPICSELLDKPVET-IFTHNACGACLTQALAVNSSCPVCKTILSSG 177
Query: 351 SQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVEC 482
++ R L L+ C GC ++ H EC
Sbjct: 178 DDIKKFNRTLLGLIESQIYKC----KGCGKEVQYQHCREH--EC 215
>SB_20533| Best HMM Match : U-box (HMM E-Value=9.6e-25)
Length = 223
Score = 40.3 bits (90), Expect = 0.004
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 186 FQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRP 365
F DV E ICPI + +++ P+ A + + R I W+ R P+ + +T + LRP
Sbjct: 147 FDTDVPFEFICPITNEIMKHPVSI-ADGYTYERRAIKSWLRRNSNSPMTNEPITDTTLRP 205
>SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01)
Length = 527
Score = 39.9 bits (89), Expect = 0.005
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTA-SQLRPVPRIL 380
++ CPICS +L+ P++ H C AC+T+ ++ CPV + +++ ++ R L
Sbjct: 248 DDFYCPICSELLDKPVET-IFTHNACDACLTQALAVNSLCPVCKTILSSGDDIKKFNRTL 306
Query: 381 RNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVEC 482
L+ C GC ++ H EC
Sbjct: 307 LGLIESQIYKC----KGCGKEVQYQHCGEH--EC 334
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 39.9 bits (89), Expect = 0.005
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRAC---ITEWISRQPTCPVDRQAVT-ASQLRPVP 371
EE C IC VLE PL + C+H+ C C E + P CP+ ++ + + L+ P
Sbjct: 315 EEFHCAICLDVLEKPLSS-KCQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 373
Query: 372 RILRNLL 392
+L LL
Sbjct: 374 LVLIQLL 380
>SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)
Length = 549
Score = 39.9 bits (89), Expect = 0.005
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP---TCPVDRQAVTASQLRP 365
D+ EE+ C C+G+ EDP P C H+ C+ C+ + Q CPV V
Sbjct: 14 DLPEEIWCRYCNGIFEDPRLLP-CLHSLCKKCLKDIEQAQEGAIACPVCLTDVECHLEEL 72
Query: 366 VPRIL 380
+P +L
Sbjct: 73 LPNVL 77
>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
Length = 169
Score = 39.5 bits (88), Expect = 0.007
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWI--SRQPTCP 326
D++ + C +C G L P C H FC++CI ++ S TCP
Sbjct: 57 DLNPFITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCP 102
>SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 39.5 bits (88), Expect = 0.007
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPA---CEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
C +C PLQ C H F R CI W++ Q CPVD Q V S +
Sbjct: 212 CGVCLSAYH-PLQYVRKLQCRHVFHRDCIDSWLATQSICPVDGQTVGVSYM 261
>SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05)
Length = 96
Score = 39.5 bits (88), Expect = 0.007
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISRQP---TCPVDRQ 338
L+CPIC +DP + P C H C C+ + + CP+D Q
Sbjct: 20 LVCPICEEEYDDPKRLP-CMHTICLGCLESMVPKNALIMKCPIDEQ 64
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 39.5 bits (88), Expect = 0.007
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 174 EIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVD 332
EI F +L CP+C V +DP+ +C H FC+ACI CP+D
Sbjct: 180 EIILFVDKPSPKLFCPLCRRVFKDPV-ITSCGHTFCQACI--MARGVEKCPLD 229
>SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/92 (23%), Positives = 45/92 (48%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILR 383
++ CPICS +L+ P++ H C AC+T+ ++ +CPV + +++ + + +
Sbjct: 108 DDFYCPICSELLDKPVET-IFTHNACGACLTQALAVNSSCPVCKTILSSGD--DIKKFNQ 164
Query: 384 NLLSRLCTSCDNAPHGCNAVLKLDSLANHLVE 479
+ LC + K + L +H+VE
Sbjct: 165 QDIKLLCGYYRETVPDESFPSKFNMLEHHVVE 196
>SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012)
Length = 450
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAP---ACEHAFCRACITEWISRQPTCPVDRQAV 344
E L CPIC ED + P AC H C+AC+++ Q CP D+ V
Sbjct: 10 EFLTCPICYHEFEDRQRGPISLACGHTICKACLSQLHKTQ--CPFDQATV 57
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 39.1 bits (87), Expect = 0.009
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRACITEWI 305
D+EL CP C +++P Q C H +CR C+T I
Sbjct: 1947 DQEL-CPACFCEVDNPYQLATCGHVYCRGCVTNLI 1980
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 39.1 bits (87), Expect = 0.009
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPR 374
++D + CP+C P++ P C H FC CI R C + RQ ++ L P
Sbjct: 64 ELDYQPDCPVCLQQASYPVRLP-CGHMFCFLCIKGVALRSRKCAICRQPISPDYL-DKPT 121
Query: 375 ILRNLLSRLCTSCDNAP 425
+++ ++S +S D AP
Sbjct: 122 LVK-VVSGQSSSSDKAP 137
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 38.7 bits (86), Expect = 0.013
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRAC---ITEWISRQPTCPVDRQAVT-ASQLRPVP 371
EE C IC VLE PL + C+H+ C C E + P CP+ ++ + + L+
Sbjct: 312 EEFHCAICLDVLEKPLSS-KCQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAA 370
Query: 372 RILRNLLSRLCTSC 413
+L LL C
Sbjct: 371 LVLIQLLEGYLVKC 384
Score = 36.7 bits (81), Expect = 0.051
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRAC---ITEWISRQPTCPVDRQAVT-ASQLRPVP 371
EE C IC VLE PL + C+H+ C C E + P CP+ ++ + + L+
Sbjct: 638 EEFHCAICLDVLEKPLSS-KCQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAA 696
Query: 372 RILRNLL 392
+L LL
Sbjct: 697 LVLIQLL 703
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 38.7 bits (86), Expect = 0.013
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 186 FQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISR 311
F ++ +C IC V++DP+ +C H++C+ CI +W +R
Sbjct: 20 FLSPPSDDSMCAICHIVVKDPILT-SCGHSYCKCCIQKWRNR 60
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 38.3 bits (85), Expect = 0.017
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACI-TEWISRQPTCP 326
V EL CP+C +L D + P C ++C CI T + + CP
Sbjct: 53 VPSELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECP 96
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 38.3 bits (85), Expect = 0.017
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +3
Query: 171 FEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP----TCPVDR 335
++ F + +E CP+C V +P P+C H CR C+ + R CP+ R
Sbjct: 7 YKFPEFHTLLGDEGACPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPICR 65
>SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028)
Length = 116
Score = 38.3 bits (85), Expect = 0.017
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACI-TEWISRQPTCP 326
V EL CP+C +L D + P C ++C CI T + + CP
Sbjct: 53 VPSELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECP 96
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 38.3 bits (85), Expect = 0.017
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWISRQP---TCPVDRQAVTASQLRPVPRILR 383
IC +C DP AP C H+FC+ C+T+ ++ + CP D QA ++ V + +
Sbjct: 404 ICGVCRETYTDPRVAP-CLHSFCKECVTKLVTERQGKFVCP-DCQADFQMSVKDVENLSQ 461
Query: 384 N 386
N
Sbjct: 462 N 462
>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 37.5 bits (83), Expect = 0.029
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTC 323
+ L C +C G++ DP + +C H CR C+ + + P C
Sbjct: 37 QSLSCRVCRGLVVDPFGSQSCLHYVCRGCLRKKRALNPGC 76
>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
Length = 351
Score = 37.5 bits (83), Expect = 0.029
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTC 323
+ L C +C G++ DP + +C H CR C+ + + P C
Sbjct: 37 QSLSCRVCRGLVVDPFGSQSCLHYVCRGCLRKKRALNPGC 76
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 37.5 bits (83), Expect = 0.029
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISRQ------PTC----PVDRQAVTASQL 359
L+C IC +P P C H+FC+ C+ + I Q PTC PV + + A
Sbjct: 15 LVCGICQETYNNPKVLP-CLHSFCQNCLDKSIRSQERVLVCPTCQCSVPVPAKGIEAF-- 71
Query: 360 RPVPRILRNLLSRLC----TSCDNAPHGCNAVLK-LDSLANHLVEC 482
PV + N+L+ L T C N A + LD + N C
Sbjct: 72 -PVNFFINNMLTVLAVQNPTKCTNCEDSAQASARCLDCVENLCTNC 116
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 37.5 bits (83), Expect = 0.029
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 216 CPICSGVLE--DPLQAPACEHAFCRACITEWISRQPTCPVDR 335
CPIC G E + + C+H F CI W+ + +CPV R
Sbjct: 62 CPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNSCPVCR 103
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 37.5 bits (83), Expect = 0.029
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 189 QGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWI 305
Q D+ ++L C IC +L D P C H +CR CI + I
Sbjct: 136 QDDIRQQLACGICHALLRDARVLP-CLHTYCRRCIEDII 173
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 37.5 bits (83), Expect = 0.029
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPT----CPVDRQAV 344
+EL+CPIC ++P + +C H CR C+ + +R+ + CP+ R +
Sbjct: 17 DELLCPICLDEFKEP-KTLSCMHDLCRKCLEDMAARESSRVIRCPLCRSEI 66
>SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029)
Length = 232
Score = 37.1 bits (82), Expect = 0.038
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +3
Query: 171 FEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTA 350
FE+ + D + CPIC +L+ P++ H C AC+T+ ++ +CPV + +++
Sbjct: 74 FELNEIRKD---DFYCPICCELLDKPVET-IFTHNACGACLTQALAVNSSCPVCKTILSS 129
Query: 351 -SQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVEC 482
++ L L+ C GC ++ H EC
Sbjct: 130 GDDIKKFNHTLLGLIESQIYKC----KGCGKEVQYQHCGEH--EC 168
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 37.1 bits (82), Expect = 0.038
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 9/104 (8%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPT-----CPVDRQAVTASQLR 362
+ +E+ CPIC +DP P C H FC C+ SR T CP + V S
Sbjct: 10 LQKEVECPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCKMVVQVSPAE 68
Query: 363 ----PVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVEC 482
V ++ LLS + +A C D +C
Sbjct: 69 VSSLKVNFLMNTLLSVVTNDSKSAKPHCQMCTSQDHAKGGCTDC 112
>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 37.1 bits (82), Expect = 0.038
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +3
Query: 123 KETDVIQSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEW 302
++ D + S + + + Q VD + +CPIC + P C H CR+CIT
Sbjct: 399 RQLDALVSYLDEQSSQMRLLQKQESVDVDELCPICCAMRISVRFLP-CRHVSCRSCITRH 457
Query: 303 ISRQPTC 323
+ C
Sbjct: 458 LMNNKEC 464
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 37.1 bits (82), Expect = 0.038
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 9/104 (8%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPT-----CPVDRQAVTASQLR 362
+ +E+ CPIC +DP P C H FC C+ SR T CP + V S
Sbjct: 10 LQKEVECPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCKMVVQVSPAE 68
Query: 363 ----PVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVEC 482
V ++ LLS + +A C D +C
Sbjct: 69 VSSLKVNFLMNTLLSVVTNGSKSAKPHCQMCTSQDHAKGGCTDC 112
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 36.7 bits (81), Expect = 0.051
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITE 299
E+L+CP+C G ++P+ C H+FC C+ E
Sbjct: 16 EQLMCPVCLGEYKNPMLL-RCYHSFCLRCVQE 46
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 36.7 bits (81), Expect = 0.051
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 183 RFQGDVDEELICPICSGVLEDPLQAPACEHAFCRAC 290
+F+ +DE C IC VL++PLQ C H C +C
Sbjct: 23 QFEKLLDERFRCTICKHVLQEPLQT-TCGHRICESC 57
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 36.3 bits (80), Expect = 0.067
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQ------PTCPVDRQAVTASQ 356
++ + L C +C ++ P P C H+FC AC+ + ++ P C + + V+ +
Sbjct: 13 ELSKHLNCSLCHRLIRGPKLLP-CLHSFCLACLEDLVTENDVGFNCPQCHTEAK-VSKAA 70
Query: 357 LRPVPR--ILRNLLS-RLCTSCDNAPHGC 434
LR +P L N+L L S D+ P C
Sbjct: 71 LRGLPTNFFLDNMLDIALMNSSDSKPVPC 99
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 36.3 bits (80), Expect = 0.067
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC L DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSICIEHLNDPRVLP-CLHSFCRHCLEE 41
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 35.9 bits (79), Expect = 0.089
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVT 347
++ C +C +L +P+ + C H+FCR C+ + + CP R +T
Sbjct: 326 DDFECKLCFNLLLEPVTS-LCGHSFCRDCLYRSLDHRVECPCCRAPLT 372
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 35.9 bits (79), Expect = 0.089
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWI---SRQPTCPVDRQA 341
EEL CP+C L++P +C H C+ C+ ++ CP R++
Sbjct: 13 EELTCPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRRS 61
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 35.5 bits (78), Expect = 0.12
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
++ C +C G +DP + AC H +CR C+ + C V
Sbjct: 14 DVTCSLCLGQYQDP-RVLACLHTYCRHCLESLVEHSKECTV 53
>SB_4569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 35.5 bits (78), Expect = 0.12
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 318 TCPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLV-ECEFNP 494
+CP+DR+ + A +RPV I +++ L + C+ C L+ A+HL EC
Sbjct: 10 SCPLDRRPLMAEDMRPVITI-NAIINSLTSKCE-----CGWTGPLERHADHLARECN--- 60
Query: 495 KRPMPCE-AGCGLVIPKDELADH 560
+R + CE C + I ELA H
Sbjct: 61 ERLVRCENVSCPMQIAHRELAGH 83
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 35.5 bits (78), Expect = 0.12
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 174 EIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP 317
+I+ +++E L C CS V ++P P C H+FC C+ E +P
Sbjct: 2 DIQSILENLEELLTCRQCSNVFKNPRITP-CLHSFCAECLNEIARSRP 48
>SB_55521| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-24)
Length = 567
Score = 35.5 bits (78), Expect = 0.12
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 411 CDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEAGCGLVIPK 542
C N PHGC +L NH +CEFNP + E G L + K
Sbjct: 90 CVNQPHGCPWEGELRHRQNHHTKCEFNPISCVHPECGKKLSVAK 133
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 35.1 bits (77), Expect = 0.15
Identities = 35/157 (22%), Positives = 58/157 (36%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVP 371
GDV +++ C +C +DP + AC H +CR C+ + C V+ Q R
Sbjct: 9 GDV-KDVTCCLCLEQYQDP-RVLACLHTYCRHCLESLVEHSKEC-----TVSCPQCREKI 61
Query: 372 RILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEAGCGLVIPKDEL 551
I + + L + N +L ++ N + CE P + G + E
Sbjct: 62 EISVDEVEELKVNFMLKDLIENMLLDQENKVNISISCE-----TCPTDHASGRCVDCSEF 116
Query: 552 ADHNCVRELRALIATQQGKLNDYQLELAEQRLVINEH 662
C+ R L T+Q + Q A+ H
Sbjct: 117 MCDFCIESHRRLFRTRQHTIISLQEATAKSTTSCKSH 153
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEE 41
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEE 41
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEE 41
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEE 41
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEE 41
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEE 41
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 8 LEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEE 40
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+ +E+ C IC +DP P C H+FCR C+ E
Sbjct: 14 LQDEVTCSICIEHFDDPRVLP-CLHSFCRHCLEE 46
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 34.7 bits (76), Expect = 0.20
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +3
Query: 216 CPICSGVLE-----DPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRIL 380
CP S +L+ +P+ P +H FC C+ W+ CP R + Q PV +IL
Sbjct: 98 CPTKSAILDLEKVKEPVVCPN-QHVFCSPCLDLWLRTNRYCPTCRTPINQDQ--PVKKIL 154
Query: 381 RNL 389
++
Sbjct: 155 GSM 157
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEE 41
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 34.7 bits (76), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 8 LEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEE 40
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 34.3 bits (75), Expect = 0.27
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRACITEWISR-----QPTCPVDRQAV--TASQL 359
++++ C +C + DP P C H +C+ C+ + +S+ + CP R V T +Q+
Sbjct: 11 EKDVTCLLCLDIFTDPRLLP-CLHTYCKKCLEDLVSQCQKKGEIYCPQCRHEVKITCAQV 69
Query: 360 R--PVPRILRNLLSRLC-TSCDNA--PHGC 434
+ + ++++ L TS +NA P GC
Sbjct: 70 SNLKINTVANDIIAALALTSEENADSPPGC 99
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 34.3 bits (75), Expect = 0.27
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACI------TEWISRQ--PTCP-----VDRQAV 344
E L C C G ++P + P C HAFC C+ T+ R PTC VD A+
Sbjct: 14 ERLTCSACKGFYKNPKRLP-CLHAFCCHCLKKTQRGTKLCERMRCPTCDYELDLVDSVAI 72
Query: 345 TA-------SQLRPVPRILRNLLSRLCTSCD 416
A S+++ + R R L C SC+
Sbjct: 73 DALPVPYYISRVQEIVRCHRGKLELACNSCE 103
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 34.3 bits (75), Expect = 0.27
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPT---CPVDRQAVTASQLRPV 368
C IC D + + C H FC C+ W+ +P CPV + ++ ++ P+
Sbjct: 63 CNICLDTARDAVIS-MCGHLFCWPCLHRWLETRPNRSMCPVCKAGISKEKVIPL 115
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 34.3 bits (75), Expect = 0.27
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACI--TEWISR-QPTCPVDRQAVTASQLRPV 368
V EEL C +C +P P C H FC+ C+ T+ R CP R + ++ +
Sbjct: 16 VREELTCSVCLEQFREPKMLP-CFHTFCKECLEKTKQSFRGNLLCPTCRTKTSVTEHEMI 74
Query: 369 PRILRNLL 392
++ N +
Sbjct: 75 QKLPNNFI 82
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 33.9 bits (74), Expect = 0.36
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C +C DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEE 41
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 33.9 bits (74), Expect = 0.36
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEDEVRCSICIEHFNDPRVLP-CFHSFCRHCLEE 41
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 33.9 bits (74), Expect = 0.36
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWISR 311
+CP C E+P P C H FC C++E + R
Sbjct: 14 VCPKCMNAYENPKVLP-CLHTFCSQCLSEELHR 45
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 33.9 bits (74), Expect = 0.36
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C +C DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEE 41
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 33.9 bits (74), Expect = 0.36
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C +C DP P C H+FCR C+ E
Sbjct: 129 LEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEE 161
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 33.9 bits (74), Expect = 0.36
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+ +E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LQDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEE 41
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 33.9 bits (74), Expect = 0.36
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 213 ICPICSGVLE--DPLQAPACEHAFCRACITEWISR-QPTCPVDRQAVTASQ 356
+C IC + D L+ C+HA+ C+ W++ + TCPV ++ V S+
Sbjct: 300 VCAICLDEYKEGDKLRILPCDHAYHCKCVDPWLTEGKRTCPVCKRPVETSK 350
>SB_13095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 33.9 bits (74), Expect = 0.36
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 177 IKRFQGDVDEELICPICSGVLE-DPLQAPACEHAFCRACITEWISRQPTC 323
+++ G+ IC CS LE P C+H CR C+T + Q TC
Sbjct: 440 MRQTPGEKLRSTICKSCSRSLEKQPAFQLPCKHLICRGCLTGRTAGQMTC 489
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 33.9 bits (74), Expect = 0.36
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C +C DP P C H+FCR C+ E
Sbjct: 9 LEDEVTCSLCIEHFNDPRVLP-CFHSFCRHCLEE 41
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 33.5 bits (73), Expect = 0.47
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 216 CPIC-SGVLEDPLQAP-ACEHAFCRACITEW 302
CP+C + E L P +C H FC CI EW
Sbjct: 102 CPVCLMSLSEQKLGTPNSCMHVFCLECILEW 132
>SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0)
Length = 2007
Score = 33.5 bits (73), Expect = 0.47
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 580 RNSRTQLWSASSSFGITKPHPASQGIGL--FGLNSHSTK*LARESSFKTALQPCGALSQL 407
RN +TQ WS+SSS T P+ + GI + G +S+ST+ S+ +P S +
Sbjct: 159 RNGKTQFWSSSSS-SPTVPNKTTNGISVPSVGRSSYSTRVSPITSALAPEQRPILG-SSI 216
Query: 406 VHNLDSRLRSILG 368
V N + +I+G
Sbjct: 217 VRNFEPERLNIVG 229
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 33.1 bits (72), Expect = 0.62
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
++ E+ C IC DP P C H+FCR C+ E
Sbjct: 9 LEGEVTCSICIEHFNDPRVLP-CLHSFCRHCLEE 41
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 32.7 bits (71), Expect = 0.82
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWI---SRQPTCPVDRQAVTASQ 356
L CP+C + +P P C H FC+ C+ + S +CP R V +
Sbjct: 143 LFCPLCHEMFANPRLLP-CLHTFCKRCLENLVPPRSHTLSCPSCRLDVALGE 193
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 32.7 bits (71), Expect = 0.82
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H FCR C+ +
Sbjct: 9 LEDEVTCAICIEHFTDPRLLP-CLHTFCRHCLED 41
>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
Length = 662
Score = 32.7 bits (71), Expect = 0.82
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 195 DVDEE---LICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTAS 353
DVDE+ +IC IC S +P P C H+FC C+ E +Q + + T+S
Sbjct: 12 DVDEDSVFMICGICRKSSATSNPKLLP-CLHSFCFGCLEEKFDQQQQQEQKQNSTTSS 68
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
++ C +C +DP + AC H +CR C+ + C V
Sbjct: 23 DVTCSLCLEQYQDP-RVLACLHTYCRHCLESLVEHSKECTV 62
>SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)
Length = 63
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPV 368
V E++ C IC PL + +C H C C + + CP + + LR +
Sbjct: 5 VTEKVKCLICMEPYTVPLVSISCWHVHCEECWLRTLGAKKLCPQCNMITSPNDLRKI 61
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITE 299
+++E+ C IC DP P C H+FC C+ E
Sbjct: 9 LEDEVTCSICIEHFNDPRVLP-CFHSFCLHCLEE 41
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWI----SRQPTCPVDRQAVTAS 353
++ C +C +DP + AC H +CR C+ + R +CP R+ + S
Sbjct: 14 DVTCSLCLEQYQDP-RVLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVIS 65
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWI----SRQPTCPVDRQAVTAS 353
++ C +C +DP + AC H +CR C+ + R +CP R+ + S
Sbjct: 14 DVTCSLCLEQYQDP-RVLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVIS 65
>SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23)
Length = 203
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 264 CEHAFCRACITEWISRQPTCPVDRQA---VTASQLRPVPRILRNLLSRLCTSCDNAPH 428
C H+FC +C ++W+ CP + A + +L + + L L + TS D+ H
Sbjct: 81 CMHSFCASCYSQWMEHSRDCPSNYLAGKNIGVDEL--LQKCLEKLDVKAYTSIDSTRH 136
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 31.1 bits (67), Expect = 2.5
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP----TCPVDRQAVTAS-- 353
GDV +++ C +C +DP + AC H +CR C+ +CP R+ + S
Sbjct: 9 GDV-KDVTCCLCLEQYQDP-RVLACLHTYCRHCLESLAEHSQGDSISCPQCREKIQISVD 66
Query: 354 --QLRPVPRILRNLLSRLCTS 410
Q +L NL+ R+ S
Sbjct: 67 KVQNLKEDFLLSNLIKRISLS 87
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 31.1 bits (67), Expect = 2.5
Identities = 34/132 (25%), Positives = 48/132 (36%), Gaps = 1/132 (0%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILRNLLS 395
CP+C + P+ + H C C + ++ PTC ++ + V N +S
Sbjct: 37 CPVCFDYVLPPILQCSSGHLVCSNCRPK-LTCCPTCRGPLGSIRNLAMEKVA----NTVS 91
Query: 396 RLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCE-AGCGLVIPKDELADHNCVR 572
C A GC L A H CEF P PC A C D + H +
Sbjct: 92 ---FPCKYANSGCEVNLPHTEKAEHEESCEFRP-YSCPCPGASCKWQGSLDAVMPH--LM 145
Query: 573 ELRALIATQQGK 608
I T QG+
Sbjct: 146 HTHKSITTLQGE 157
>SB_11968| Best HMM Match : zf-TRAF (HMM E-Value=0.32)
Length = 144
Score = 31.1 bits (67), Expect = 2.5
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +3
Query: 282 RACITEWISR-------QPTCPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNA 440
RAC+ + +S +P CP+DR+ + A +RPV I+ ++ L + C+ C
Sbjct: 4 RACVLQILSADTCPGIPEPACPLDRRPLIAEDIRPV-IIVNAIVKCLLSQCE-----CGW 57
Query: 441 VLKLDSLANHLVECEFNPKRPMPCE-AGCGLVI 536
L+S A+ L E++ +R + CE GC + I
Sbjct: 58 TGLLESHADRLAR-EWD-ERLVRCENVGCPMRI 88
>SB_42017| Best HMM Match : DUF1421 (HMM E-Value=0.43)
Length = 565
Score = 30.7 bits (66), Expect = 3.3
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Frame = +3
Query: 540 KDELADHNCVRELRALIATQQGKLNDYQLELAE---QRLVINEHKRELA-LLKGIYEGHA 707
K LADH EL L A ++ +L D++LELA+ Q I++ RE LL +
Sbjct: 56 KQRLADHKL--ELADLDAQEKQRLADHKLELADLDAQEKAIDQRLREAKHLLHHTSQARL 113
Query: 708 CIEPYYASSC*PDGTRGSSPLGEFPYHEQESRAWGGMISTPDDVLQMMIXRSXLRVGMPA 887
++ S + R +PL F +S+++ +TPD + + + +PA
Sbjct: 114 WLKTL-RSPIKVNFIR-PNPLSTFTAMRTKSKSFTAKATTPDALPAFIEATQQSQAALPA 171
Query: 888 FHIDHLMENWS*K 926
I N++ K
Sbjct: 172 TKIPQSQANFAAK 184
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRIL 380
D LIC +C+ P + C H+FC++CI + ++ L +PR +
Sbjct: 57 DPALICRVCNQRFNKP-KLLHCLHSFCQSCIEGLARKTEDDCLELICPVCDSLGAIPRSV 115
Query: 381 RNL 389
+L
Sbjct: 116 ESL 118
>SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25)
Length = 626
Score = 29.5 bits (63), Expect = 7.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 306 SRQPTCPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDS 458
S+ PT P+ Q A+ PVP+ ++ LS +PH + V LDS
Sbjct: 374 SKSPTSPLSLQGSEAALTSPVPQ--QSELSTTSPMSSTSPHSSDLVSPLDS 422
>SB_47089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 29.5 bits (63), Expect = 7.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 306 SRQPTCPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDS 458
S+ PT P+ Q A+ PVP+ ++ LS +PH + V LDS
Sbjct: 29 SKSPTSPLSLQGSEAALTSPVPQ--QSELSTTSPMSSTSPHSSDLVSPLDS 77
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 29.5 bits (63), Expect = 7.7
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 144 SSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACI 293
SSTK + + ++++ +GD + E +C +C V D + C A+ CI
Sbjct: 390 SSTKSSTIS-KVRKDKGDKESEAVCAVCEQV-NDLMFCGDCNSAYHPDCI 437
>SB_21939| Best HMM Match : F-box (HMM E-Value=0.001)
Length = 909
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 405 TSCDNAPHGCNAVLKLDSLANHLVEC 482
T C N+ +GC AVL +S+ +HL C
Sbjct: 56 TPCTNSFYGCPAVLPRESIKSHLSIC 81
>SB_5526| Best HMM Match : zf-C3HC4 (HMM E-Value=2)
Length = 106
Score = 29.5 bits (63), Expect = 7.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACI 293
C ICS P Q ACEH FC CI
Sbjct: 81 CSICSEPPTAPHQG-ACEHVFCYYCI 105
>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.5 bits (63), Expect = 7.7
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 8/41 (19%)
Frame = +3
Query: 204 EELICPICSGV-LEDPLQA-------PACEHAFCRACITEW 302
E + C +C V + P Q+ P C HAFC CI +W
Sbjct: 170 ENVTCAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKW 210
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,033,828
Number of Sequences: 59808
Number of extensions: 657577
Number of successful extensions: 1518
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5129408549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -