Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G06_e47_14.seq
         (1568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    31   0.12 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    31   0.12 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   4.5  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 30.7 bits (66), Expect = 0.12
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
 Frame = +3

Query: 201 DEELI--CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPR 374
           DEEL   C +C     DP+    C+H FC  C      +   C +     T     P   
Sbjct: 240 DEELPFKCYVCRESFVDPI-VTKCKHYFCERCALAQYKKSSRCAI-CGVQTNGMFNPAKE 297

Query: 375 ILRNLLSR 398
           ++  L SR
Sbjct: 298 LIARLKSR 305


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 30.7 bits (66), Expect = 0.12
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
 Frame = +3

Query: 201 DEELI--CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPR 374
           DEEL   C +C     DP+    C+H FC  C      +   C +     T     P   
Sbjct: 240 DEELPFKCYVCRESFVDPI-VTKCKHYFCERCALAQYKKSSRCAI-CGVQTNGMFNPAKE 297

Query: 375 ILRNLLSR 398
           ++  L SR
Sbjct: 298 LIARLKSR 305


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 621 QLELAEQRLVINEHKRELALLKGIYEGHACIEP 719
           +LEL    L++N  +++L +   ++E H  I P
Sbjct: 634 KLELRLTELIVNPLQQDLEIFNQVWEWHELISP 666


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,171,894
Number of Sequences: 2352
Number of extensions: 22403
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 184909725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)