Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_G06_e47_14.seq
(1568 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 52 8e-07
At5g38895.1 68418.m04704 zinc finger (C3HC4-type RING finger) fa... 50 6e-06
At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger) fa... 49 1e-05
At5g47430.1 68418.m05844 expressed protein 48 1e-05
At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger) fa... 48 2e-05
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 47 4e-05
At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger) fa... 46 7e-05
At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger) fa... 46 7e-05
At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger) fa... 46 7e-05
At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger) fa... 46 7e-05
At4g00335.2 68417.m00044 zinc finger (C3HC4-type RING finger) fa... 46 7e-05
At4g00335.1 68417.m00043 zinc finger (C3HC4-type RING finger) fa... 46 7e-05
At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger) fa... 45 2e-04
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 44 3e-04
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 44 4e-04
At4g17410.1 68417.m02607 expressed protein 43 5e-04
At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger) fa... 43 5e-04
At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membr... 43 5e-04
At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putat... 43 5e-04
At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger) fa... 43 5e-04
At5g15790.2 68418.m01847 zinc finger (C3HC4-type RING finger) fa... 43 6e-04
At5g15790.1 68418.m01846 zinc finger (C3HC4-type RING finger) fa... 43 6e-04
At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger) fa... 43 6e-04
At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger) fa... 43 6e-04
At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger) fa... 42 8e-04
At5g37930.1 68418.m04569 seven in absentia (SINA) family protein... 42 0.001
At5g22750.1 68418.m02657 SNF2 domain-containing protein / helica... 42 0.001
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 42 0.001
At5g41450.1 68418.m05034 zinc finger (C3HC4-type RING finger) fa... 42 0.001
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 42 0.001
At2g37580.1 68415.m04610 zinc finger (C3HC4-type RING finger) fa... 42 0.001
At2g34000.1 68415.m04163 zinc finger protein-related contains we... 42 0.001
At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger) fa... 41 0.002
At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger) fa... 41 0.002
At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger) fa... 41 0.002
At5g01520.1 68418.m00067 zinc finger (C3HC4-type RING finger) fa... 41 0.003
At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger) fa... 41 0.003
At2g25410.1 68415.m03043 hypothetical protein 41 0.003
At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger) fa... 41 0.003
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 41 0.003
At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger) fa... 41 0.003
At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger) fa... 40 0.003
At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger) fa... 40 0.003
At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger) fa... 40 0.003
At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa... 40 0.004
At3g02290.2 68416.m00211 zinc finger (C3HC4-type RING finger) fa... 40 0.004
At3g02290.1 68416.m00210 zinc finger (C3HC4-type RING finger) fa... 40 0.004
At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger) fa... 40 0.004
At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger) fa... 40 0.004
At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger) fa... 40 0.004
At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger) fa... 40 0.004
At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger) fa... 40 0.004
At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger) fa... 40 0.006
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 40 0.006
At5g37200.1 68418.m04466 zinc finger (C3HC4-type RING finger) fa... 40 0.006
At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger) fa... 40 0.006
At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger) fa... 40 0.006
At1g29340.1 68414.m03587 armadillo/beta-catenin repeat family pr... 40 0.006
At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger) fa... 40 0.006
At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger) fa... 40 0.006
At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger) fa... 39 0.008
At5g12310.1 68418.m01447 zinc finger (C3HC4-type RING finger) fa... 39 0.008
At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger) fa... 39 0.008
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 39 0.008
At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger) fa... 39 0.008
At3g11840.1 68416.m01451 U-box domain-containing protein low sim... 39 0.008
At1g74410.1 68414.m08620 zinc finger (C3HC4-type RING finger) fa... 39 0.008
At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger) fa... 39 0.010
At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-rela... 39 0.010
At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger) fa... 39 0.010
At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger) fa... 39 0.010
At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger) fa... 39 0.010
At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger) fa... 39 0.010
At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger) fa... 39 0.010
At1g10560.1 68414.m01189 armadillo/beta-catenin repeat family pr... 39 0.010
At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger) fa... 38 0.014
At3g05200.1 68416.m00567 zinc finger (C3HC4-type RING finger) fa... 38 0.014
At2g28830.1 68415.m03505 armadillo/beta-catenin repeat family pr... 38 0.014
At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger) fa... 38 0.014
At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger) fa... 38 0.018
At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger) fa... 38 0.018
At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger) fa... 38 0.018
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 38 0.018
At4g35480.1 68417.m05042 zinc finger (C3HC4-type RING finger) fa... 38 0.018
At4g28890.1 68417.m04129 zinc finger (C3HC4-type RING finger) fa... 38 0.018
At3g61790.1 68416.m06933 seven in absentia (SINA) family protein... 38 0.018
At3g11110.1 68416.m01345 zinc finger (C3HC4-type RING finger) fa... 38 0.018
At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger) fa... 38 0.018
At1g66630.1 68414.m07571 seven in absentia (SINA) family protein... 38 0.018
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 38 0.018
At5g58787.1 68418.m07365 zinc finger (C3HC4-type RING finger) fa... 38 0.024
At4g38140.1 68417.m05385 zinc finger (C3HC4-type RING finger) fa... 38 0.024
At3g48030.1 68416.m05236 hypoxia-responsive family protein / zin... 38 0.024
At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger) fa... 38 0.024
At2g35910.1 68415.m04408 zinc finger (C3HC4-type RING finger) fa... 38 0.024
At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger) fa... 38 0.024
At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger) fa... 37 0.032
At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger) fa... 37 0.032
At4g14220.1 68417.m02194 zinc finger (C3HC4-type RING finger) fa... 37 0.032
At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger) fa... 37 0.032
At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger) fa... 37 0.032
At3g30460.1 68416.m03854 zinc finger (C3HC4-type RING finger) fa... 37 0.032
At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger) fa... 37 0.032
At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger) fa... 37 0.032
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 37 0.032
At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At5g37870.1 68418.m04561 seven in absentia (SINA) family protein... 37 0.042
At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At4g09100.1 68417.m01501 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At5g27420.1 68418.m03273 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 36 0.055
At5g22000.3 68418.m02560 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At5g22000.2 68418.m02559 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At5g22000.1 68418.m02558 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At5g08139.1 68418.m00949 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At3g60220.1 68416.m06730 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At1g74990.1 68414.m08705 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 36 0.073
At5g37910.1 68418.m04567 seven in absentia (SINA) family protein... 36 0.096
At5g15820.1 68418.m01851 zinc finger (C3HC4-type RING finger) fa... 36 0.096
At3g60080.1 68416.m06709 zinc finger (C3HC4-type RING finger) fa... 36 0.096
At2g24480.1 68415.m02925 zinc finger (C3HC4-type RING finger) fa... 36 0.096
At2g18670.1 68415.m02175 zinc finger (C3HC4-type RING finger) fa... 36 0.096
At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger) fa... 36 0.096
At1g14200.1 68414.m01680 zinc finger (C3HC4-type RING finger) fa... 36 0.096
At5g18320.1 68418.m02156 armadillo/beta-catenin repeat family pr... 35 0.13
At4g27880.1 68417.m04002 seven in absentia (SINA) family protein... 35 0.13
At4g09110.1 68417.m01503 zinc finger (C3HC4-type RING finger) fa... 35 0.13
At3g58040.1 68416.m06470 seven in absentia (SINA) family protein... 35 0.13
At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger) fa... 35 0.13
At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger) fa... 35 0.13
At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger) fa... 35 0.13
At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger) fa... 35 0.13
At1g57800.1 68414.m06558 zinc finger (C3HC4-type RING finger) fa... 35 0.13
At5g57750.1 68418.m07219 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putat... 35 0.17
At5g20910.1 68418.m02483 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At4g10940.1 68417.m01779 PHD finger family protein contains Pfam... 35 0.17
At3g18773.1 68416.m02383 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At2g34990.1 68415.m04293 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At1g71020.1 68414.m08197 armadillo/beta-catenin repeat family pr... 35 0.17
At1g65430.1 68414.m07423 zinc finger protein-related contains we... 35 0.17
At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger) fa... 35 0.17
At5g06490.1 68418.m00728 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At4g30370.1 68417.m04315 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18 pr... 34 0.22
At3g02340.1 68416.m00217 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At2g41980.1 68415.m05193 seven in absentia (SINA) family protein... 34 0.22
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At1g49220.1 68414.m05518 zinc finger (C3HC4-type RING finger) fa... 34 0.22
At5g18340.1 68418.m02158 U-box domain-containing protein weak si... 34 0.29
At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At3g61180.1 68416.m06847 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At3g20010.1 68416.m02531 SNF2 domain-containing protein / helica... 34 0.29
At2g35000.1 68415.m04294 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At1g20823.1 68414.m02608 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 34 0.29
At5g61550.1 68418.m07724 protein kinase family protein contains ... 33 0.39
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At5g02750.1 68418.m00217 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At3g51325.1 68416.m05618 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At3g05870.1 68416.m00660 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At1g53010.1 68414.m06001 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger) fa... 33 0.39
At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc ... 33 0.51
At5g42200.1 68418.m05136 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At5g18330.1 68418.m02157 U-box domain-containing protein weak si... 33 0.51
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At4g11360.1 68417.m01832 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At1g23980.1 68414.m03028 zinc finger (C3HC4-type RING finger) fa... 33 0.51
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At5g20885.1 68418.m02480 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At4g09560.1 68417.m01571 protease-associated zinc finger (C3HC4-... 33 0.68
At3g47180.1 68416.m05123 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At3g05670.1 68416.m00631 PHD finger family protein contains Pfam... 33 0.68
At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At1g65040.2 68414.m07372 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger) fa... 33 0.68
At1g27910.1 68414.m03420 U-box domain-containing protein contain... 33 0.68
At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger) fa... 32 0.90
At4g22250.1 68417.m03219 zinc finger (C3HC4-type RING finger) fa... 32 0.90
At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identi... 32 0.90
At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger) fa... 32 0.90
At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger) fa... 32 0.90
At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger) fa... 32 0.90
At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger) fa... 32 0.90
At3g04460.1 68416.m00473 Pex2/Pex12 N-terminal domain-containing... 32 0.90
At1g71980.1 68414.m08320 protease-associated zinc finger (C3HC4-... 32 0.90
At1g62370.1 68414.m07037 zinc finger (C3HC4-type RING finger) fa... 32 0.90
At1g24440.1 68414.m03079 expressed protein similar to MTD2 [Medi... 32 0.90
At5g60820.1 68418.m07630 zinc finger (C3HC4-type RING finger) fa... 32 1.2
At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger) fa... 32 1.2
At3g11950.1 68416.m01473 UbiA prenyltransferase family protein c... 32 1.2
At2g17730.1 68415.m02054 zinc finger (C3HC4-type RING finger) fa... 32 1.2
At1g49210.1 68414.m05517 zinc finger (C3HC4-type RING finger) fa... 32 1.2
At1g24330.1 68414.m03069 armadillo/beta-catenin repeat family pr... 32 1.2
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 32 1.2
At5g20570.1 68418.m02442 ring-box protein-related similar to rin... 31 1.6
At4g35840.1 68417.m05091 zinc finger (C3HC4-type RING finger) fa... 31 1.6
At3g61550.1 68416.m06894 zinc finger (C3HC4-type RING finger) fa... 31 1.6
At3g42830.1 68416.m04485 ring-box protein Roc1/Rbx1/Hrt1, putati... 31 1.6
At3g14970.1 68416.m01893 zinc finger (C3HC4-type RING finger) fa... 31 1.6
At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger) fa... 31 1.6
At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger) fa... 31 1.6
At1g49200.1 68414.m05516 zinc finger (C3HC4-type RING finger) fa... 31 1.6
At1g22670.1 68414.m02833 protease-associated zinc finger (C3HC4-... 31 1.6
At1g20780.1 68414.m02602 armadillo/beta-catenin repeat protein-r... 31 1.6
At5g41440.1 68418.m05033 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At3g15740.1 68416.m01994 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADNE... 31 2.1
At1g61620.1 68414.m06943 expressed protein contains Pfam profile... 31 2.1
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At1g26800.1 68414.m03266 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At1g04360.1 68414.m00426 zinc finger (C3HC4-type RING finger) fa... 31 2.1
At5g41400.1 68418.m05030 zinc finger (C3HC4-type RING finger) fa... 31 2.7
At4g28270.1 68417.m04049 zinc finger (C3HC4-type RING finger) fa... 31 2.7
At4g15975.1 68417.m02425 zinc finger (C3HC4-type RING finger) fa... 31 2.7
At3g19910.1 68416.m02521 zinc finger (C3HC4-type RING finger) fa... 31 2.7
At2g44330.1 68415.m05514 zinc finger (C3HC4-type RING finger) fa... 31 2.7
At2g27940.1 68415.m03387 zinc finger (C3HC4-type RING finger) fa... 31 2.7
At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At4g11370.1 68417.m01833 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At3g61460.1 68416.m06883 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At3g29360.1 68416.m03687 UDP-glucose 6-dehydrogenase, putative v... 30 3.6
At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At1g74760.1 68414.m08662 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At1g24580.1 68414.m03092 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At1g18910.1 68414.m02354 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At5g62800.1 68418.m07883 seven in absentia (SINA) family protein... 30 4.8
At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger) fa... 30 4.8
At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger) fa... 30 4.8
At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger) fa... 30 4.8
At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger) fa... 30 4.8
At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger) fa... 30 4.8
At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger) fa... 30 4.8
At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger) fa... 30 4.8
At1g74620.1 68414.m08642 zinc finger (C3HC4-type RING finger) fa... 30 4.8
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 30 4.8
At1g05120.1 68414.m00514 SNF2 domain-containing protein / helica... 30 4.8
At5g67120.1 68418.m08462 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At5g52280.1 68418.m06488 protein transport protein-related low s... 29 6.3
At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At5g40140.1 68418.m04871 armadillo/beta-catenin repeat family pr... 29 6.3
At4g17920.1 68417.m02670 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At3g43430.1 68416.m04597 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At2g35420.1 68415.m04341 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At2g26000.1 68415.m03122 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At2g25380.1 68415.m03039 zinc finger protein-related very low si... 29 6.3
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger) fa... 29 6.3
At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing... 29 6.3
At5g39320.1 68418.m04761 UDP-glucose 6-dehydrogenase, putative v... 29 8.4
At3g08505.2 68416.m00987 zinc finger (CCCH-type/C3HC4-type RING ... 29 8.4
At3g08505.1 68416.m00986 zinc finger (CCCH-type/C3HC4-type RING ... 29 8.4
At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger) fa... 29 8.4
At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger) fa... 29 8.4
At1g79810.2 68414.m09319 Pex2/Pex12 N-terminal domain-containing... 29 8.4
At1g79810.1 68414.m09318 Pex2/Pex12 N-terminal domain-containing... 29 8.4
At1g15100.1 68414.m01803 zinc finger (C3HC4-type RING finger) fa... 29 8.4
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 52.4 bits (120), Expect = 8e-07
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRP 365
D+D++L+CPIC +++D AC H+FC CI + + CP Q +T +QL P
Sbjct: 45 DLDKDLLCPICMQIIKDAFLT-ACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYP 100
>At5g38895.1 68418.m04704 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 49.6 bits (113), Expect = 6e-06
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 150 TKKADM-GFEIKRFQGDVDEELICPICSG--VLEDPLQAPACEHAFCRACITEWISRQPT 320
TK M G E+ + D D+E ICP C LE+P C H F +CI EW+ R T
Sbjct: 148 TKSKTMPGIEV--YYADSDDEDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSET 205
Query: 321 CPV 329
CPV
Sbjct: 206 CPV 208
>At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 212
Score = 48.8 bits (111), Expect = 1e-05
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 126 ETDVIQSSTKKADMGFEIKRFQGDVDEELICPICSGV--LEDPLQAPACEHAFCRACITE 299
+T++ ST++ D F ++EE CPIC +E+P C+H F ACI E
Sbjct: 132 QTEIDLESTEEIDPKLSKAVFI-PIEEEEDCPICLEEYDIENPKLVAKCDHHFHLACILE 190
Query: 300 WISRQPTCPV 329
W+ R TCPV
Sbjct: 191 WMERSETCPV 200
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 48.4 bits (110), Expect = 1e-05
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Frame = +3
Query: 183 RFQGDVDEELICPICSGVLEDP-LQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
R G++ EL CP+C V++D L + C +FC CI + I + C R V A L
Sbjct: 284 RSVGELPPELKCPLCKEVMKDAALTSKCCYKSFCDKCIRDHIISKSMCVCGRSDVLADDL 343
Query: 360 RPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEAGCGLVIP 539
P + LR+ ++R+ + +++ +V + L + C PK P +
Sbjct: 344 LP-NKTLRDTINRILEAGNDSTENVGSVGHIPDLES--ARCP-PPKALSPTTSVASKGEK 399
Query: 540 KDELADHNCVRELRA 584
K L+++N L+A
Sbjct: 400 KPVLSNNNDASTLKA 414
>At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 48.0 bits (109), Expect = 2e-05
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLR 362
+C IC + P+ C+H FC C++EW R+ TCP+ R V + L+
Sbjct: 364 LCAICQEKMHTPILL-RCKHMFCEDCVSEWFERERTCPLCRALVKPADLK 412
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 46.8 bits (106), Expect = 4e-05
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 156 KADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQ-----PT 320
+ DM ++KR V + CP+C +L D C H FCR CI E I+ P
Sbjct: 2 EGDMVAKVKR--ETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPV 59
Query: 321 CPVDRQAVTASQLRPVPRILRNLLSRL 401
C +D +LRP IL++L ++L
Sbjct: 60 CDIDLGGTPLEKLRP-DHILQDLRAKL 85
>At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 46.0 bits (104), Expect = 7e-05
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
+ + CPIC + + C H FC+ CI ISRQ CP R+ VTA +L
Sbjct: 143 EPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGKCPTCRKKVTAKEL 194
>At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 46.0 bits (104), Expect = 7e-05
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
+ + CPIC + + C H FC+ CI ISRQ CP R+ VTA +L
Sbjct: 143 EPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGKCPTCRKKVTAKEL 194
>At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 46.0 bits (104), Expect = 7e-05
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
+ + CPIC + + C H FC+ CI ISRQ CP R+ VTA +L
Sbjct: 143 EPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGKCPTCRKKVTAKEL 194
>At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 46.0 bits (104), Expect = 7e-05
Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Frame = +3
Query: 126 ETDVIQSSTKKADMGFEIKRFQ-GDVDEELICPICSGVLEDPLQ-APACEHAFCRACITE 299
+ DVI+S A + E+K F+ G+ E +C E+PL+ P C H F CI E
Sbjct: 93 DKDVIESFP--AFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 300 WISRQPTCPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVE 479
W+S + TCPV R ++ P + NA G SL V
Sbjct: 151 WLSSRSTCPVCRANLSLKSGDSFPH------PSMDVETGNAQRGVQESPDERSLTGSSVT 204
Query: 480 CEFNPKRPMPCEAGCGLV 533
C N P GL+
Sbjct: 205 CNNNANYTTPRSRSTGLL 222
>At4g00335.2 68417.m00044 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 190
Score = 46.0 bits (104), Expect = 7e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 201 DEELICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPV-DRQAVTASQL 359
+EE CPIC +E+P CEH F +C+ EWI R CP+ D++ V +L
Sbjct: 134 EEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDDRL 189
>At4g00335.1 68417.m00043 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 190
Score = 46.0 bits (104), Expect = 7e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 201 DEELICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPV-DRQAVTASQL 359
+EE CPIC +E+P CEH F +C+ EWI R CP+ D++ V +L
Sbjct: 134 EEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDDRL 189
>At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 217
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTAS--QLRPVPR 374
C +C +LE+ A P C+H F +C+ W++ Q TCPV R S +L P PR
Sbjct: 100 CAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPR 157
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 862
Score = 44.0 bits (99), Expect = 3e-04
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISR-QPTCPVDRQAVTASQLRPVP 371
E+ CPIC + + C H FCRACI + + R +P CP+ R ++T S L P
Sbjct: 612 EDFDCPICISPPTNII-ITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAP 667
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 43.6 bits (98), Expect = 4e-04
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRI 377
EL CPIC + + +C H FC ACI + + TCPV + ++R P +
Sbjct: 348 ELKCPICLSLYNSAVSL-SCNHVFCNACIVKSMKMDATCPVCKIPYHRREIRGAPHM 403
>At4g17410.1 68417.m02607 expressed protein
Length = 744
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 183 RFQGDVDEELICPICSGVLEDP-LQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
R G+ EL CP+C V+ D L + C ++C CI + I + C V A L
Sbjct: 195 RSVGEFPPELKCPLCKEVMRDAALASKCCLKSYCDKCIRDHIIAKSMCVCGATHVLADDL 254
Query: 360 RPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSL 461
P + LR+ ++R+ S +++ ++ ++ +
Sbjct: 255 LP-NKTLRDTINRILESGNSSAENAGSMCQVQDM 287
>At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA2b [Arabidopsis thaliana] GI:3790571; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 211
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 123 KETDVIQSSTKKADMGFEIKRFQGDVDEELICPICSGVL---EDPLQAPACEHAFCRACI 293
K +V+ + F+ + Q + +E C IC L ED + P C H F C+
Sbjct: 129 KVYNVVSCDSAPLATDFDQESQQEEEEESKTCAICLENLLRSEDYCEMPTCSHYFHEPCL 188
Query: 294 TEWISR-QPTCPVDRQAV 344
TEW++R +CP+ R+ V
Sbjct: 189 TEWLTRDNNSCPLCRKPV 206
>At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membrane
protein (PEX10) identical to zinc-binding peroxisomal
integral membrane protein GI:4337011 from [Arabidopsis
thaliana]
Length = 381
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
C +C + P P C H FC +CI EW + + CP+ R T S L
Sbjct: 327 CTLCLSTRQHPTATP-CGHVFCWSCIMEWCNEKQECPLCRTPNTHSSL 373
>At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 313
Score = 43.2 bits (97), Expect = 5e-04
Identities = 25/93 (26%), Positives = 38/93 (40%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILRNL 389
L CPIC L P+ H C +C T+ ++ P+C A+ R RI+ +
Sbjct: 42 LDCPICCHALTSPIFQCDNGHIACSSCCTKLRNKCPSC-----ALPIGNFR--SRIMERV 94
Query: 390 LSRLCTSCDNAPHGCNAVLKLDSLANHLVECEF 488
+ + +C N HGC H +C F
Sbjct: 95 VEAVMVTCPNVKHGCTEKFSYGKELIHEKDCRF 127
>At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger)
family protein
Length = 421
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISRQ-----PTCPVDRQAVTASQLRP 365
L C IC +L D C H FCR CI E I+ P C +D + +LRP
Sbjct: 14 LSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGSTPLEKLRP 70
>At5g15790.2 68418.m01847 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 42.7 bits (96), Expect = 6e-04
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 201 DEELICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
D+E +CP C + E+P C H F +CI EW+ R CPV
Sbjct: 177 DDEDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPV 221
>At5g15790.1 68418.m01846 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 42.7 bits (96), Expect = 6e-04
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 201 DEELICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
D+E +CP C + E+P C H F +CI EW+ R CPV
Sbjct: 177 DDEDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPV 221
>At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger proteins
RHG1a [Arabidopsis thaliana] GI:3822225, RHY1a
[Arabidopsis thaliana] GI:3790593; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 202
Score = 42.7 bits (96), Expect = 6e-04
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 84 VTQXXXXXXXXXXKETDVIQSSTKKADMGFEIKRFQGDVDEELIC--PICSGVLEDPLQA 257
VT KE+ +++ + KA+ E+K F + D IC + S P +
Sbjct: 115 VTYQYVHVEETSSKESRMVRLGSMKAE---ELKSFNMETDSCSICLQSLVSSSKTGPTRM 171
Query: 258 PACEHAFCRACITEWISRQPTCPVDR 335
+C H F +C+ EW+ R+ TCP+ R
Sbjct: 172 -SCSHVFHSSCLVEWLKRKNTCPMCR 196
>At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 42.7 bits (96), Expect = 6e-04
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 210 LICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRI 377
L C +C L D +A P+C+H F CI W+ TCP+ R+ V Q R P +
Sbjct: 86 LECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTRPEL 144
>At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 336
Score = 42.3 bits (95), Expect = 8e-04
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 147 STKKADMGFEIKRFQGDVDEELICPICSGVL---EDPLQAPACEHAFCRACITEWISRQP 317
S KK ++G E +R G +ICPIC E P C+H F CI EW+
Sbjct: 270 SYKKVELG-ESRRLPGT--NGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHS 326
Query: 318 TCPVDRQA 341
+CPV R +
Sbjct: 327 SCPVCRNS 334
>At5g37930.1 68418.m04569 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 349
Score = 41.9 bits (94), Expect = 0.001
Identities = 32/118 (27%), Positives = 46/118 (38%)
Frame = +3
Query: 141 QSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPT 320
QSS+ D + DV L CPIC L+ P+ H C C T+ +R P+
Sbjct: 91 QSSSSSKDSPLSVTLLDPDV---LDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPS 147
Query: 321 CPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNP 494
C + V R + ++ SC NA +GC + +H C F P
Sbjct: 148 CTLPIGYVRC-------RAMEKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTP 198
>At5g22750.1 68418.m02657 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1029
Score = 41.9 bits (94), Expect = 0.001
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRAC-ITEW-ISRQPTCPVDRQAVTASQLRPVP 371
CPIC LED + P C H CR C + W S CPV R V+ +L P
Sbjct: 794 CPICLEALEDAVLTP-CAHRLCRECLLASWRNSTSGLCPVCRNTVSKQELITAP 846
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWIS-RQPTCPVDRQ-AVTASQLRP 365
G++ +++ CPIC G+++ C H FCR CI + + CP R+ + LR
Sbjct: 128 GEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRKHCASRRSLRD 187
Query: 366 VPRILRNLLSRLCTSCDN 419
P+ L++ L T+ D+
Sbjct: 188 DPK-FDALIAALFTNIDS 204
>At5g41450.1 68418.m05034 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 164
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 207 ELICPICSGVLEDP---LQAPACEHAFCRACITEWISRQPTCPVDRQAVTA 350
++ CPIC ED ++ C H F R CI W+++ TCP R ++TA
Sbjct: 107 KIFCPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQNLTCPNCRCSLTA 157
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 123 KETDVIQSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEW 302
K+ +V + + D ++K + D++ E C IC + + + P C H+ C C +W
Sbjct: 116 KQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICME-MNNMVVLPNCTHSLCIKCYRDW 174
Query: 303 ISRQPTCPVDRQAV 344
R +CP R ++
Sbjct: 175 HGRSESCPFCRDSL 188
>At2g37580.1 68415.m04610 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 235
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +3
Query: 216 CPICSGVLEDP---LQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILRN 386
C +C V D Q C+HAF CI W+ P CP+ R V+ Q P + N
Sbjct: 142 CSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDVSVKQQTEAPNVPVN 201
Query: 387 L 389
+
Sbjct: 202 V 202
>At2g34000.1 68415.m04163 zinc finger protein-related contains weak
hit to Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 151
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQ 338
++E+ CP+C G++ + P C H F CI +W+ TCPV R+
Sbjct: 86 NQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLESHATCPVCRR 134
>At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 207
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +3
Query: 189 QGDVDEELICPICSGVL---EDPLQAPACEHAFCRACITEWISR-QPTCPVDRQAV 344
QG+ +E C IC L +D + P C H F C+T+W+ R +CP+ R+ V
Sbjct: 147 QGEEEESKTCAICLEELSTSDDYCELPNCTHCFHEPCLTQWLIRGNNSCPLCRKPV 202
>At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 41.1 bits (92), Expect = 0.002
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 258 PACEHAFCRACITEWISRQPTCPVDRQAV--TASQLRPVPRILRNLLSRLCTSCDNAPHG 431
P C HAF CI EW+ P CP+ R A+ +A L P+ + + R+ S D+ +
Sbjct: 173 PLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEEN- 231
Query: 432 CNAVL 446
NA++
Sbjct: 232 -NAII 235
>At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 41.1 bits (92), Expect = 0.002
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 258 PACEHAFCRACITEWISRQPTCPVDRQAV--TASQLRPVPRILRNLLSRLCTSCDNAPHG 431
P C HAF CI EW+ P CP+ R A+ +A L P+ + + R+ S D+ +
Sbjct: 173 PLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEEN- 231
Query: 432 CNAVL 446
NA++
Sbjct: 232 -NAII 235
>At5g01520.1 68418.m00067 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 242
Score = 40.7 bits (91), Expect = 0.003
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 123 KETDVIQSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEW 302
K+ ++ +K D + K + D++ E C IC + + + P C H+ C C W
Sbjct: 115 KQKEICDKRYRKKDRTDKGKMSEIDLEREEECGICLEI-RNKVVLPTCNHSMCINCYRNW 173
Query: 303 ISRQPTCPVDR 335
+R +CP R
Sbjct: 174 RARSQSCPFCR 184
>At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 153
Score = 40.7 bits (91), Expect = 0.003
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 171 FEIKR-FQGDVDEELICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPV-DRQ 338
FE+K+ ++ +DE CPIC +++P C H F ACI W+ R CPV D++
Sbjct: 91 FELKKQYREAIDE---CPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKE 147
Query: 339 AV 344
V
Sbjct: 148 LV 149
>At2g25410.1 68415.m03043 hypothetical protein
Length = 377
Score = 40.7 bits (91), Expect = 0.003
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 147 STKKADMGFEIKRFQGDVDEELICPICSG---VLEDPLQAPACEHAFCRACITEWISRQP 317
S KK ++G E +R +++CPIC E P CEH F CI W+
Sbjct: 306 SYKKVELG-ESRRLPTG-SNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHS 363
Query: 318 TCPVDR 335
+CPV R
Sbjct: 364 SCPVCR 369
>At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 132
Score = 40.7 bits (91), Expect = 0.003
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Frame = +3
Query: 138 IQSSTKKADMGFEIKRFQGDVDEE----LICPICSGVLEDPLQAPA---CEHAFCRACIT 296
I++ KA + +IK +G +EE CPIC ED Q C H F CI
Sbjct: 50 IETGQSKALVFKDIKEEEGGREEEGGGKRFCPICLEEYEDDHQIRRLRNCGHVFHLLCID 109
Query: 297 EWISRQPTCPVDRQAVTASQL 359
W++++ CP R++V L
Sbjct: 110 SWLTQKQNCPSCRRSVDLMSL 130
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 40.7 bits (91), Expect = 0.003
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
C IC ED P C HAF +CI W+S + TCPV R ++
Sbjct: 128 CAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
>At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 508
Score = 40.7 bits (91), Expect = 0.003
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Frame = +3
Query: 216 CPICSGVLE--DPLQA-PACEHAFCRACITEWISRQPTCPVDRQAVTASQLR-----PVP 371
C +C G + D LQ P C+H F CI W++ TCP+ R A+ S+ R PVP
Sbjct: 100 CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVP 159
Query: 372 RIL 380
++
Sbjct: 160 SLV 162
>At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA1b [Arabidopsis thaliana] GI:3790567; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 216
Score = 40.3 bits (90), Expect = 0.003
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Frame = +3
Query: 174 EIKRFQGDVDEELICPICSGVLEDPL---------QAPACEHAFCRACITEWISRQPTCP 326
E + + +D + C IC L D L Q P C H+F + CI +WI RQ +CP
Sbjct: 145 EEQTVEPSMDSDESCSICFEKLSDSLSETYHNSIIQMPKCLHSFHQKCIFKWIGRQNSCP 204
Query: 327 VDRQ 338
+ R+
Sbjct: 205 LCRR 208
>At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV-TASQLRPVPR 374
C +C VL++ +A P C+H F C+ W++ TCPV R V +L P PR
Sbjct: 108 CAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPR 164
>At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 381
Score = 40.3 bits (90), Expect = 0.003
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVP 371
E L CP+C ED P C H F CI W+ Q TCP+ R + L PVP
Sbjct: 114 EALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCR-----ANLVPVP 167
>At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 174 EIKRFQGDVDEELICPICSGVLEDP---LQAPACEHAFCRACITEWISRQPTCP 326
E K + + +E+ C IC LED ++ C H F R+CI W+ + +CP
Sbjct: 103 EFKDIEKEGFDEIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCP 156
>At3g02290.2 68416.m00211 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger motif, C3HC4 type
(RING finger)
Length = 231
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 201 DEELICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
++E +CP C E+P C H F +CI EW+ R CPV
Sbjct: 176 EDEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPV 220
>At3g02290.1 68416.m00210 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger motif, C3HC4 type
(RING finger)
Length = 231
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 201 DEELICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
++E +CP C E+P C H F +CI EW+ R CPV
Sbjct: 176 EDEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPV 220
>At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 390
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +3
Query: 153 KKADMGFEIKRFQG--DVDEELICPICSGVLEDP---LQAPACEHAFCRACITEWISRQP 317
KKA RF + + L C +C ED P C HAF CI +W+ +
Sbjct: 101 KKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHA 160
Query: 318 TCPVDRQAV 344
TCP+ R V
Sbjct: 161 TCPLCRNRV 169
>At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 491
Score = 39.9 bits (89), Expect = 0.004
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
++ C +C +L +P P C H FCR+C+ + + R CP+ R +
Sbjct: 192 DDFDCTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNKCPLCRTVI 237
>At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 39.9 bits (89), Expect = 0.004
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
++ C +C +L +P P C H FCR+C+ + + R CP+ R +
Sbjct: 192 DDFDCTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNKCPLCRTVI 237
>At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 39.9 bits (89), Expect = 0.004
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
++ C +C +L +P P C H FCR+C+ + + R CP+ R +
Sbjct: 192 DDFDCTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNKCPLCRTVI 237
>At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 39.9 bits (89), Expect = 0.004
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
++ C +C +L +P P C H FCR+C+ + + R CP+ R +
Sbjct: 192 DDFDCTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNKCPLCRTVI 237
>At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 226
Score = 39.5 bits (88), Expect = 0.006
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDR 335
L CPIC L + C H F R CI W+ + P+CP+ R
Sbjct: 172 LDCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICR 215
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1277
Score = 39.5 bits (88), Expect = 0.006
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRAC-ITEWISRQ-PTCPVDRQAVTASQLRPVP 371
CPIC +DP+ P C H CR C +T W S CP+ R + ++L P
Sbjct: 1040 CPICLESADDPVLTP-CAHRMCRECLLTSWRSPSCGLCPICRTILKRTELISCP 1092
>At5g37200.1 68418.m04466 zinc finger (C3HC4-type RING finger)
family protein low similarity to ring-H2 finger protein
RHY1a from Arabidopsis thaliana [gi:3790593], ring
finger-H2 protein from Xenopus laevis [gi:13752371];
contains Pfam domain zinc finger, C3HC4 type (RING
finger) PF00097
Length = 217
Score = 39.5 bits (88), Expect = 0.006
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 201 DEELICPIC----SGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQ 338
+E+ C IC S ED ++ P C H F + C+ EW+ Q +CP+ R+
Sbjct: 154 EEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCRK 203
>At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPV 368
C IC G ED + P C H F CI W+ + +CP RQ++ Q P+
Sbjct: 114 CLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQPSPM 167
>At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); similar to GI:4928397
from [Arabidopsis thaliana] (Plant Mol. Biol. 40 (4),
579-590 (1999))
Length = 413
Score = 39.5 bits (88), Expect = 0.006
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
KR G + E CP+C E+ P C HAF +CI W+S CP+ R +
Sbjct: 166 KRGDGLI-ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI 222
>At1g29340.1 68414.m03587 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 729
Score = 39.5 bits (88), Expect = 0.006
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 138 IQSSTKKADMGFEIKRFQGD----VDEELICPICSGVLEDPLQAPACEHAFCRACITEWI 305
I+++ KK GF + GD V ++ +CPI ++ DP+ + + R I WI
Sbjct: 282 IENNPKKPRKGFVAQEI-GDTFITVPKDFVCPISLDLMTDPV-IISTGQTYDRNSIARWI 339
Query: 306 SR-QPTCPVDRQAVTASQLRPVPRILRNLLSRLCTS 410
TCP Q + S++ P R L+NL+ + CT+
Sbjct: 340 EEGHCTCPKTGQMLMDSRIVP-NRALKNLIVQWCTA 374
>At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 713
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
EL CP+C +L P+ P C+H FC +C+ + + CPV
Sbjct: 22 ELKCPLCLKLLNRPVLLP-CDHVFCDSCVHKSSQVESGCPV 61
>At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 714
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
EL CP+C +L P+ P C+H FC +C+ + + CPV
Sbjct: 22 ELKCPLCLKLLNRPVLLP-CDHVFCDSCVHKSSQVESGCPV 61
>At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger)
family protein ow similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA1a [gi:3790554]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 208
Score = 39.1 bits (87), Expect = 0.008
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDP-----LQAPACEHAFCRACITEWISRQPTCPVDRQ 338
GD +EE C IC + + P C H F ++CI EW+ RQ +CP+ R+
Sbjct: 146 GD-EEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCRR 198
>At5g12310.1 68418.m01447 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 254
Score = 39.1 bits (87), Expect = 0.008
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 216 CPICSGV--LEDPLQAPACEHAFCRACITEWIS--RQPTCP 326
C IC L++ CEHA+C CI W S +PTCP
Sbjct: 43 CAICLDTIPLQETAMVKGCEHAYCVTCILRWASYKEKPTCP 83
>At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 39.1 bits (87), Expect = 0.008
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 213 ICPICSGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
IC +C +P++ P C H F C+ EW+ TCP+ R + S+L
Sbjct: 96 IC-LCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRL 144
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 39.1 bits (87), Expect = 0.008
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITE 299
EL CPIC ++D C H FC+AC+ E
Sbjct: 1558 ELECPICLSEVDDGYSLEGCSHLFCKACLLE 1588
>At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 273
Score = 39.1 bits (87), Expect = 0.008
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 123 KETDVIQSSTKKADMGFEIKRFQGDVDEELICPIC--SGVLEDPLQAPACEHAFCRACIT 296
K+ S+ K D E K+ ++EL C +C + + ++ C H F CI
Sbjct: 183 KQASTSSSAEKMLDSANESKK---GTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCID 239
Query: 297 EWISRQPTCPV 329
W+ +Q TCPV
Sbjct: 240 PWLRQQGTCPV 250
>At3g11840.1 68416.m01451 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 470
Score = 39.1 bits (87), Expect = 0.008
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTA-SQLRPVP 371
++ ICPI +++DP+ + + R I +W+ + P+CPV +Q + S L P
Sbjct: 23 EIPNYFICPISLEIMKDPVTTVS-GITYDRQNIVKWLEKVPSCPVTKQPLPLDSDLTP-N 80
Query: 372 RILRNLLSRLC 404
+LR L+ C
Sbjct: 81 HMLRRLIQHWC 91
>At1g74410.1 68414.m08620 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 223
Score = 39.1 bits (87), Expect = 0.008
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 258 PACEHAFCRACITEWISRQPTCPVDRQAV 344
P C+H F C+ +W+ R +CP+ RQAV
Sbjct: 193 PKCDHTFHLVCVDKWLIRHGSCPICRQAV 221
>At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 362
Score = 38.7 bits (86), Expect = 0.010
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +3
Query: 132 DVIQSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQA---PACEHAFCRACITEW 302
D + S K+ ++ K G VD C +C E+ P C HAF CI W
Sbjct: 115 DGLNESMIKSITVYKYKSGDGFVDGS-DCSVCLSEFEENESLRLLPKCNHAFHLPCIDTW 173
Query: 303 ISRQPTCPVDRQAVTASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLD 455
+ CP+ R VT P + +N +S + + N+ H +V +++
Sbjct: 174 LKSHSNCPLCRAFVTGVN-NPTASVGQN-VSVVVANQSNSAHQTGSVSEIN 222
>At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-related
low similarity to RING-H2 zinc finger protein ATL4
[Arabidopsis thaliana] GI:4928399
Length = 174
Score = 38.7 bits (86), Expect = 0.010
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 213 ICPICSG---VLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLR 362
+C +C G + E+ ++ P C+H F CI W+ TCP+ R +V+ S +
Sbjct: 104 LCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSISSTK 156
>At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 38.7 bits (86), Expect = 0.010
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 162 DMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEW--ISRQPTCPVDR 335
D ++++ G C IC + ++P+ C H +C C+ +W IS CPV +
Sbjct: 121 DKKADVEKSSGSDGNFFDCNICLDLSKEPVLT-CCGHLYCWPCLYQWLQISDAKECPVCK 179
Query: 336 QAVTASQLRPV 368
VT+ + P+
Sbjct: 180 GEVTSKTVTPI 190
>At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 38.7 bits (86), Expect = 0.010
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 162 DMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEW--ISRQPTCPVDR 335
D ++++ G C IC + ++P+ C H +C C+ +W IS CPV +
Sbjct: 121 DKKADVEKSSGSDGNFFDCNICLDLSKEPVLT-CCGHLYCWPCLYQWLQISDAKECPVCK 179
Query: 336 QAVTASQLRPV 368
VT+ + P+
Sbjct: 180 GEVTSKTVTPI 190
>At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 38.7 bits (86), Expect = 0.010
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 162 DMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEW--ISRQPTCPVDR 335
D ++++ G C IC + ++P+ C H +C C+ +W IS CPV +
Sbjct: 121 DKKADVEKSSGSDGNFFDCNICLDLSKEPVLT-CCGHLYCWPCLYQWLQISDAKECPVCK 179
Query: 336 QAVTASQLRPV 368
VT+ + P+
Sbjct: 180 GEVTSKTVTPI 190
>At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 480
Score = 38.7 bits (86), Expect = 0.010
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACI-TEWIS-RQPTCPV 329
L CPIC+ +D C H FCR+CI ++I+ R CPV
Sbjct: 14 LACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPV 55
>At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 38.7 bits (86), Expect = 0.010
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWI---SRQPTCPVDRQAVTASQLRPV 368
C IC + +DP+ C H FC C+ +W+ S+ CPV + + +L P+
Sbjct: 23 CNICLDLAQDPI-VTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLVPL 75
>At1g10560.1 68414.m01189 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 697
Score = 38.7 bits (86), Expect = 0.010
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWI-SRQPTCPVDRQAVTASQL 359
E+L+CPI ++ DP+ H + R+ IT+W S TCP+ + +T+++L
Sbjct: 290 EDLLCPISLEIMTDPVVIET-GHTYDRSSITKWFGSGNITCPITGKILTSTEL 341
>At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 182
Score = 38.3 bits (85), Expect = 0.014
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
CPIC + C H FC+ CI +S Q CP R+ +T L
Sbjct: 127 CPICLCPFTQEVSTK-CGHIFCKKCIKNALSLQAKCPTCRKKITVKDL 173
>At3g05200.1 68416.m00567 zinc finger (C3HC4-type RING finger)
family protein (ATL6) contains Pfam profile: PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 398
Score = 38.3 bits (85), Expect = 0.014
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDR 335
EL C IC ED P C+H F CI W+ TCPV R
Sbjct: 125 ELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170
>At2g28830.1 68415.m03505 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 654
Score = 38.3 bits (85), Expect = 0.014
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISR-QPTCPVDRQAVTASQLRPVPRIL 380
EE CPI ++ DP+ + + + R CI +W+ TCP ++ +T+ + P +L
Sbjct: 258 EEFRCPISLELMTDPVIVSSGQ-TYERECIKKWLEGGHLTCPKTQETLTSDIMTP-NYVL 315
Query: 381 RNLLSRLCTS 410
R+L+++ C S
Sbjct: 316 RSLIAQWCES 325
>At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 38.3 bits (85), Expect = 0.014
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISR 311
E C IC + D + A C H FC C +EW+ R
Sbjct: 134 EHAKCSICLNIWHDVVTAAPCLHNFCNGCFSEWMRR 169
>At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 308
Score = 37.9 bits (84), Expect = 0.018
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 171 FEIKRFQGDVDEELICPICSGVLEDP---LQAPACEHAFCRACITEWISRQPTCPVDRQA 341
F + + + DEE C IC G+ E + C H F CI W+S TCP+ R
Sbjct: 123 FVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP 182
Query: 342 VTAS 353
V A+
Sbjct: 183 VLAA 186
>At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA3a [gi:3790573]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 192
Score = 37.9 bits (84), Expect = 0.018
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDP-----LQAPACEHAFCRACITEWISRQPTCPVDRQ 338
GD +EE C IC + + P C H F + CI EW+ RQ +CP+ R+
Sbjct: 130 GD-EEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCRR 182
>At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b, Arabidopsis thaliana, PIR:T41745 [gi:3790575];
contains Pfam domain zinc finger, C3HC4 type (RING
finger) PF00097
Length = 208
Score = 37.9 bits (84), Expect = 0.018
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDP-----LQAPACEHAFCRACITEWISRQPTCPVDRQ 338
GD +EE C IC + + P C H F ++CI +W+ RQ +CP+ R+
Sbjct: 146 GD-EEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLCRR 198
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 37.9 bits (84), Expect = 0.018
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITE 299
E+ CPIC ++D C H FC+AC+ E
Sbjct: 1561 EVECPICLSEVDDGYSLEGCSHLFCKACLLE 1591
>At4g35480.1 68417.m05042 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 200
Score = 37.9 bits (84), Expect = 0.018
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQ 338
GD D C IC + + P C HAF ACI +W++ + +CP R+
Sbjct: 105 GDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRR 156
>At4g28890.1 68417.m04129 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 386
Score = 37.9 bits (84), Expect = 0.018
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 210 LICPICSGVLE--DPLQA-PACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
L C +C E + L+ P C HAF CI +W+ + TCP+ R V+ +
Sbjct: 75 LDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEE 126
>At3g61790.1 68416.m06933 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 326
Score = 37.9 bits (84), Expect = 0.018
Identities = 27/99 (27%), Positives = 38/99 (38%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRI 377
V E L CP+C+ + P+ H C C +R PTC RQ + +R +
Sbjct: 57 VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTC---RQEL--GDIRCL--A 109
Query: 378 LRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNP 494
L + L C + GC + S H C F P
Sbjct: 110 LEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRP 148
>At3g11110.1 68416.m01345 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 158
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
+R + + +EE C IC G E+ + P C H + C+ W+ + +CP+ R ++
Sbjct: 95 RRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152
>At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 227
Score = 37.9 bits (84), Expect = 0.018
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +3
Query: 144 SSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWI---SRQ 314
+ST +D + GD + C IC + +DP+ C H FC C+ W+ S
Sbjct: 8 TSTSYSDSNNDTNDQGGDFE----CNICFELAQDPI-VTLCGHLFCWPCLYRWLHHHSHS 62
Query: 315 PTCPVDRQAVTASQLRPV 368
CPV + V +L P+
Sbjct: 63 QECPVCKAVVQDDKLVPL 80
>At1g66630.1 68414.m07571 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 303
Score = 37.9 bits (84), Expect = 0.018
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +3
Query: 168 GFEIKRFQGDVDEELI-CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
G E+ R ++ +L+ CPIC L P+ H C +C + + P C + R
Sbjct: 32 GSEVARSATLLELDLLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKYKCPYCSL-RIGF 90
Query: 345 TASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLD--SLANHLVECEF 488
S RIL ++ + SC NA +GC + D S + H CEF
Sbjct: 91 FRS------RILEKIVEAVVVSCPNAKYGCTEKIPYDNESESAHERVCEF 134
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 1287
Score = 37.9 bits (84), Expect = 0.018
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 144 SSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPT- 320
S T ++ +G K+ Q D IC IC+ ED + A C H FC+ CI E ++
Sbjct: 970 SFTWESSVGLAKKQIQSDASLA-ICGICNDAPEDAV-ASVCGHVFCKQCIYERLTGDSNH 1027
Query: 321 CP 326
CP
Sbjct: 1028 CP 1029
>At5g58787.1 68418.m07365 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 242
Score = 37.5 bits (83), Expect = 0.024
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +3
Query: 123 KETDVIQSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEW 302
K+ +V + +K D E + + +++ E C IC + + P C H+ C C +W
Sbjct: 116 KQKEVCKMRYRKKD---ESEMSEIEIEREEECGICME-MNSKVVLPNCTHSLCIKCYRDW 171
Query: 303 ISRQPTCPVDRQAV 344
R +CP R ++
Sbjct: 172 RGRSQSCPFCRDSL 185
>At4g38140.1 68417.m05385 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 145
Score = 37.5 bits (83), Expect = 0.024
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 201 DEELICPIC--SGVLEDPL-QAPACEHAFCRACITEWISR-QPTCPVDRQAVTA 350
+EE+ CPIC ED + P C H F CI W+ R TCP+ R V A
Sbjct: 57 EEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFVLA 110
>At3g48030.1 68416.m05236 hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein similar
to RING-H2 finger protein RHX1a [Arabidopsis thaliana]
GI:3790591; contains Pfam profiles PF00097: Zinc finger
C3HC4 type (RING finger), PF04588: Hypoxia induced
protein conserved region
Length = 349
Score = 37.5 bits (83), Expect = 0.024
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
+++ C +C D + P C HAF CI W+ TCP+ R++++ S +
Sbjct: 201 LEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNV 257
>At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 425
Score = 37.5 bits (83), Expect = 0.024
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEW--ISRQPTCPVDRQAVTASQLRPV 368
C IC + +DP+ C H +C +C+ +W +S CPV + V+ + P+
Sbjct: 141 CYICLDLSKDPV-VTNCGHLYCWSCLYQWLQVSEAKECPVCKGEVSVKTVTPI 192
>At2g35910.1 68415.m04408 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL6 [Arabidopsis thaliana] GI:4928403; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 217
Score = 37.5 bits (83), Expect = 0.024
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +3
Query: 216 CPICSGVLEDP---LQAPACEHAFCRACITEWISRQPTCPVDR 335
C IC G + Q P C H F CI W+ PTCPV R
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCR 189
>At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger) domain
Length = 359
Score = 37.5 bits (83), Expect = 0.024
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 204 EELICPICSGVLED--PLQAPACEHAFCRACITEWISRQPTCPV 329
E+ C IC ED L A C H F CI +W+ + TCP+
Sbjct: 303 EDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPL 346
>At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 255
Score = 37.1 bits (82), Expect = 0.032
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPA----CEHAFCRACITEWIS--RQPTCP 326
C IC + E PLQ A CEH +C CI W S PTCP
Sbjct: 46 CAIC--LSEIPLQETAMVKGCEHTYCVTCILRWASCKESPTCP 86
>At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 472
Score = 37.1 bits (82), Expect = 0.032
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 213 ICPICSGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDRQAV 344
+C +C ED L+ P C HAF CI W+ TCP+ R ++
Sbjct: 136 VC-LCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSL 179
>At4g14220.1 68417.m02194 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 371
Score = 37.1 bits (82), Expect = 0.032
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 216 CPICSG--VLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
C IC L+DP +C+H + CI EW R CP+
Sbjct: 46 CSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPI 85
>At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 203
Score = 37.1 bits (82), Expect = 0.032
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3
Query: 174 EIKRFQGDVDEELIC--PICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDR 335
E+K + + + IC + SG L C H F C+ EW R+ TCP+ R
Sbjct: 142 ELKSLKMETESCSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTCPLCR 197
>At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 71
Score = 37.1 bits (82), Expect = 0.032
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 174 EIKRFQGDVDEELIC--PICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDR 335
E+K + + + IC + SG + C H F C+ EW+ R+ TCP+ R
Sbjct: 11 ELKSLKMETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCR 66
>At3g30460.1 68416.m03854 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 147
Score = 37.1 bits (82), Expect = 0.032
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 210 LICPICSGVL--EDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
++C IC L + L C H + + CI+ W+S + TCP+ R V
Sbjct: 95 VVCAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCRHNV 141
>At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 296
Score = 37.1 bits (82), Expect = 0.032
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPA---CEHAFCRACITEWISRQPTCPV 329
CPIC L + A C+H +C ACI +W S + CP+
Sbjct: 39 CPICLENLTERRSAAVITVCKHGYCLACIRKWSSFKRNCPL 79
>At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 423
Score = 37.1 bits (82), Expect = 0.032
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 216 CPIC--SGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDR 335
CP+C ED L+ P C HAF CI W+ TCP+ R
Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 168
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 37.1 bits (82), Expect = 0.032
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWIS-RQPTCPVDR 335
IC +C EDP+ C H FC C++++I+ + TCP R
Sbjct: 678 ICCVCHDPPEDPV-VTLCGHIFCYQCVSDYITGDEDTCPAPR 718
>At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 407
Score = 36.7 bits (81), Expect = 0.042
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDR 335
+ E C +C+ + E +A C+H F CI W+S + +CPV R
Sbjct: 193 IGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCR 240
>At5g37870.1 68418.m04561 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 281
Score = 36.7 bits (81), Expect = 0.042
Identities = 30/117 (25%), Positives = 48/117 (41%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILRNL 389
L CPIC L+ P+ H C +C + ++ P C + V + R + R+L ++
Sbjct: 43 LDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACAL---PVGHIRCRAMERVLESV 99
Query: 390 LSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEAGCGLVIPKDELADH 560
L C A GC + + H C F+P P + GC +L +H
Sbjct: 100 L----VPCRYADLGCTKTIYYGRESTHEKICNFSP-CSCPVQ-GCNYTGSYKDLYEH 150
>At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 36.7 bits (81), Expect = 0.042
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +3
Query: 216 CPIC-SGVLEDPLQAP---ACEHAFCRACITEWISRQPTCPV 329
C IC ++ AP +C H F C+ EW++R+ TCP+
Sbjct: 153 CSICLQSLVSSSKTAPTRMSCSHVFHNGCLVEWLNRKNTCPM 194
>At4g09100.1 68417.m01501 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 132
Score = 36.7 bits (81), Expect = 0.042
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQ---APACEHAFCRACITEWISRQPTCPVDRQAV 344
EL C +C +D P C H F C+ W+S TCP+ R V
Sbjct: 82 ELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAKV 130
>At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile: PF00097 zinc finger, C3HC4
type (RING finger)
Length = 878
Score = 36.7 bits (81), Expect = 0.042
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 153 KKADMGFEIKRFQGDVDEELICPICSGVL---EDPLQAPACEHAFCRACITEWISRQPTC 323
KK ++G E +R G ++CPIC E P C+H F CI W+ +C
Sbjct: 814 KKMELG-ESRRLSGT--NGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSC 870
Query: 324 PVDRQA 341
P+ R +
Sbjct: 871 PLCRNS 876
Score = 35.5 bits (78), Expect = 0.096
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 210 LICPICSG--VLEDPLQ-APACEHAFCRACITEWISRQPTCPVDRQA 341
++CPIC V ++ ++ P C+H F CI W+ +CP+ R +
Sbjct: 613 IVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNS 659
>At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 36.7 bits (81), Expect = 0.042
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +3
Query: 216 CPICSGVLE---DPLQAPACEHAFCRACITEWISRQPTCPVDRQAV------TASQLRPV 368
CP+C E + Q P C H + CI W+ + +CPV RQ + ++SQ R
Sbjct: 190 CPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTT 248
Query: 369 PRILRNLLSRLCTSCDNAPHGCN 437
P RN S +S N+ N
Sbjct: 249 P--TRNYRSSSSSSSSNSRENGN 269
>At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 36.7 bits (81), Expect = 0.042
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +3
Query: 216 CPICSGVLE---DPLQAPACEHAFCRACITEWISRQPTCPVDRQAV------TASQLRPV 368
CP+C E + Q P C H + CI W+ + +CPV RQ + ++SQ R
Sbjct: 190 CPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTT 248
Query: 369 PRILRNLLSRLCTSCDNAPHGCN 437
P RN S +S N+ N
Sbjct: 249 P--TRNYRSSSSSSSSNSRENGN 269
>At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 36.7 bits (81), Expect = 0.042
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +3
Query: 216 CPICSGVLE---DPLQAPACEHAFCRACITEWISRQPTCPVDRQAV------TASQLRPV 368
CP+C E + Q P C H + CI W+ + +CPV RQ + ++SQ R
Sbjct: 190 CPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTT 248
Query: 369 PRILRNLLSRLCTSCDNAPHGCN 437
P RN S +S N+ N
Sbjct: 249 P--TRNYRSSSSSSSSNSRENGN 269
>At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 325
Score = 36.7 bits (81), Expect = 0.042
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLED--PLQAPACEHAFCRACITEWISRQPTCPVDR 335
K+ G V E +C IC +D + C H F C+ EW R CP+ R
Sbjct: 265 KKASGVVCENDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLCR 318
>At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 36.3 bits (80), Expect = 0.055
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Frame = +3
Query: 129 TDVIQSSTKKADMGFEIKRFQG----DVDEELI-CPICSG---VLEDPLQAPACEHAFCR 284
TD+ ++ K G + R D E++ C +C V E P C H F
Sbjct: 142 TDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHL 201
Query: 285 ACITEWISRQPTCPVDRQ 338
CI +W+ R +CP+ R+
Sbjct: 202 PCIDKWLRRHASCPLCRR 219
>At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 617
Score = 36.3 bits (80), Expect = 0.055
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP--TCPVDRQAVTASQLRPVPRIL 380
E+ C IC + E P+ P C H FC C +W Q TC + R + + PRI
Sbjct: 126 EIFCSICIQLPERPITTP-CGHNFCLKCFEKWAVGQGKLTCMICRSKI-PRHVAKNPRIN 183
Query: 381 RNLLSRL 401
L+S +
Sbjct: 184 LALVSAI 190
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACI 293
+E C IC VL P+ P C H FC+AC+
Sbjct: 491 KEFSCQICREVLSLPVTTP-CAHNFCKACL 519
>At5g27420.1 68418.m03273 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana]
gi|4928403|gb|AAD33584.1|AF132016_1[4928403]; contains
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 368
Score = 36.3 bits (80), Expect = 0.055
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +3
Query: 210 LICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRIL 380
L C IC ED P C+H F CI W+ TCPV R ++ P P ++
Sbjct: 122 LECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCR--TNLAEQTPEPEVV 179
>At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger)
family protein zinc finger protein, Arabidopsis
thaliana, gb:L76926
Length = 225
Score = 36.3 bits (80), Expect = 0.055
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 216 CPICSG--VLEDPLQA-PACEHAFCRACITEWISRQPTCPVDR 335
C +C G E+ LQ P+C H F CI W++ TCP+ R
Sbjct: 97 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCR 139
>At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger)
family protein RING-H2 finger protein RHA1a, Arabidopsis
thaliana,AF078683
Length = 236
Score = 36.3 bits (80), Expect = 0.055
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 216 CPICSG--VLEDPLQA-PACEHAFCRACITEWISRQPTCPVDR 335
C +C G E+ LQ P+C H F CI W++ TCP+ R
Sbjct: 111 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCR 153
>At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 345
Score = 36.3 bits (80), Expect = 0.055
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDR 335
C IC ED P C H F CI W+S TCPV R
Sbjct: 123 CAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165
>At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 206
Score = 36.3 bits (80), Expect = 0.055
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 174 EIKRFQGDVDEELIC--PICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
E K + + + IC + SG + C H F C+ EW+ R+ TCP+ R +
Sbjct: 146 EFKSLKMETEPCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 36.3 bits (80), Expect = 0.055
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 174 EIKRFQGDVDEELICPICSGVLE---DPLQAPACEHAFCRACITEWISRQPTCPVDRQ 338
+IK Q + + CP+C E D + P C+H + CI W+ ++ TCPV R+
Sbjct: 107 KIKIRQKHLGLDPYCPVCQDQFEIGSDARKMP-CKHIYHSECILPWLVQRNTCPVCRK 163
>At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 36.3 bits (80), Expect = 0.055
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
D + L C +C L D +A P C H F CI W TCP+ R V
Sbjct: 113 DFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 36.3 bits (80), Expect = 0.055
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 216 CPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVT 347
C IC + + D ++ C H F + CI W+ R +CPV + +VT
Sbjct: 589 CVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCKSSVT 634
>At5g22000.3 68418.m02560 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 216 CPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVT 347
C IC S DP +C+H + CI EW R CP+ Q+++
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSIS 78
>At5g22000.2 68418.m02559 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 216 CPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVT 347
C IC S DP +C+H + CI EW R CP+ Q+++
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSIS 78
>At5g22000.1 68418.m02558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 216 CPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVT 347
C IC S DP +C+H + CI EW R CP+ Q+++
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSIS 78
>At5g08139.1 68418.m00949 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 376
Score = 35.9 bits (79), Expect = 0.073
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 189 QGDVDEELICPICSGVLE---DPLQAPACEHAFCRACITEWISRQPTCPVDR 335
+ D D L+C +C + +Q P C H + CI W+ + TCPV R
Sbjct: 300 ENDDDGGLVCAVCKDEMNIGNKAVQLP-CNHKYHSECIVPWLKVRNTCPVCR 350
>At3g60220.1 68416.m06730 zinc finger (C3HC4-type RING finger)
family protein (ATL4) contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 334
Score = 35.9 bits (79), Expect = 0.073
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 216 CPICSGVLE--DPLQA-PACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
C +C E D L+ P C HAF CI W+ TCP+ R + AS+
Sbjct: 117 CAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASE 166
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 35.9 bits (79), Expect = 0.073
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISR-QPTCPVDRQAVTASQLRPVPRIL 380
+EL C IC + +P C H+FC+ C+ + CP RQ + + V +L
Sbjct: 720 DELSCAICLEICFEP-STTTCGHSFCKKCLRSAADKCGRKCPKCRQLIGNGRYCTVNTVL 778
Query: 381 RNLLSRLCTSCDNAPHGCNAVLK 449
N + L A +A LK
Sbjct: 779 WNTIQLLFPKEVEAQRAASANLK 801
>At1g74990.1 68414.m08705 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 137
Score = 35.9 bits (79), Expect = 0.073
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 189 QGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWI---SRQPTCPVDRQAVTASQL 359
+ D C IC + +P+ C H FC C+ +W+ S+ CPV + V L
Sbjct: 10 EDDASNNFGCNICLELAREPI-VTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALVKEDTL 68
Query: 360 RPV 368
P+
Sbjct: 69 VPL 71
>At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 623
Score = 35.9 bits (79), Expect = 0.073
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP--TCPVDRQAVTASQLRPVPRIL 380
E+ C IC + E P+ P C H FC C +W Q TC + R + + PRI
Sbjct: 126 EIFCSICIQLPERPVTTP-CGHNFCLKCFEKWAVGQGKLTCMICRSKI-PRHVAKNPRIN 183
Query: 381 RNLLSRL 401
L+S +
Sbjct: 184 LALVSAI 190
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACI 293
+E C IC VL P+ P C H FC+AC+
Sbjct: 494 KEFSCQICRKVLSLPVTTP-CAHNFCKACL 522
>At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 622
Score = 35.9 bits (79), Expect = 0.073
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPACEHAFCRACITEWISRQP--TCPVDRQAVTASQLRPVPRIL 380
E+ C IC + E P+ P C H FC C +W Q TC + R + + PRI
Sbjct: 126 EIFCSICIQLPERPVTTP-CGHNFCLKCFEKWAVGQGKLTCMICRSKI-PRHVAKNPRIN 183
Query: 381 RNLLSRL 401
L+S +
Sbjct: 184 LALVSAI 190
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACI 293
+E C IC VL P+ P C H FC+AC+
Sbjct: 494 KEFSCQICRKVLSLPVTTP-CAHNFCKACL 522
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 216 CPICSGVLE--DPLQAPACEHAFCRACITEWISRQPTCPVDRQA 341
C IC E D + C H+F C+ +W+SR+ CPV ++A
Sbjct: 320 CSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKKA 363
>At5g37910.1 68418.m04567 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 276
Score = 35.5 bits (78), Expect = 0.096
Identities = 25/94 (26%), Positives = 38/94 (40%)
Frame = +3
Query: 210 LICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILRNL 389
L CPIC L P+ H C +C + ++ P C + V S+ R + +L ++
Sbjct: 36 LDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTL---PVGHSRSRAMESVLESI 92
Query: 390 LSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFN 491
L C N GC + H EC F+
Sbjct: 93 L----IPCPNVRFGCTKSFFYGKESAHEKECIFS 122
>At5g15820.1 68418.m01851 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 348
Score = 35.5 bits (78), Expect = 0.096
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 210 LICPICSG--VLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
++C IC V ++ ++ C+H + CI W+ + TCPV R + L
Sbjct: 289 IVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPTDDL 340
>At3g60080.1 68416.m06709 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 306
Score = 35.5 bits (78), Expect = 0.096
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 123 KETDVIQSSTKKADMGFEIKRFQGDVDEELICPICSG--VLEDPLQAPACEHAFCRACIT 296
K +D+ T + D D L+C +C ++ + + C H + CI
Sbjct: 138 KSSDIDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIV 197
Query: 297 EWISRQPTCPVDR 335
W+S +CP+ R
Sbjct: 198 PWLSDHNSCPLCR 210
>At2g24480.1 68415.m02925 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 198
Score = 35.5 bits (78), Expect = 0.096
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Frame = +3
Query: 195 DVDEEL---ICPICSGVL---EDPLQAPACEHAFCRACITEW-ISRQPTCPVDRQAV 344
DVD+E C IC + E+ Q P C+H + C+T+W I +CP+ R+ V
Sbjct: 140 DVDQEEESETCAICLENMSRSENYCQMPYCKHCYHEGCVTKWVIGHNNSCPLCRKPV 196
>At2g18670.1 68415.m02175 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 35.5 bits (78), Expect = 0.096
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 258 PACEHAFCRACITEWISRQPTCPVDRQAV 344
P C H F R C+ W+ + TCP+ R V
Sbjct: 127 PGCGHVFHRKCVDTWLLKASTCPICRARV 155
>At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger)
family protein (ATL3) identical to RING-H2 zinc finger
protein (ATL3) GB:AF132013 (Arabidopsis thaliana)
Length = 324
Score = 35.5 bits (78), Expect = 0.096
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = +3
Query: 189 QGDVDEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
Q + L C IC L +A P C H+F CI W TCP+ R V +
Sbjct: 118 QDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQ 177
Query: 360 RPVPRI 377
R+
Sbjct: 178 ASSKRV 183
>At1g14200.1 68414.m01680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 179
Score = 35.5 bits (78), Expect = 0.096
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 264 CEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRI 377
C+H F C+ EW+ R TCP+ R + ++ +I
Sbjct: 127 CKHKFHSKCVEEWLGRHATCPMCRYEMPVEEVEEEKKI 164
>At5g18320.1 68418.m02156 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 458
Score = 35.1 bits (77), Expect = 0.13
Identities = 18/70 (25%), Positives = 39/70 (55%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPR 374
+V +E IC + + ++ +P+ A + + ITEW+ + TCP +Q V + +L
Sbjct: 71 EVPKEFICTLSNTIMIEPVII-ASGQTYEKRYITEWLKHERTCPKTKQ-VLSHRLWIPNH 128
Query: 375 ILRNLLSRLC 404
++ +L+++ C
Sbjct: 129 LISDLITQWC 138
>At4g27880.1 68417.m04002 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 327
Score = 35.1 bits (77), Expect = 0.13
Identities = 30/112 (26%), Positives = 42/112 (37%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRI 377
V E L CP+C+ + P+ H C C +R PTC RQ + +R +
Sbjct: 58 VYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTC---RQEL--GDIRCL--A 110
Query: 378 LRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEAGCGLV 533
L + L C GC + S H C F P + CG+V
Sbjct: 111 LEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIV 162
>At4g09110.1 68417.m01503 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 302
Score = 35.1 bits (77), Expect = 0.13
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 216 CPICSG--VLEDPLQ-APACEHAFCRACITEWISRQPTCPVDR 335
C IC V ++ L+ P C H F CI W+S Q TCP R
Sbjct: 123 CAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACR 165
>At3g58040.1 68416.m06470 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 308
Score = 35.1 bits (77), Expect = 0.13
Identities = 26/99 (26%), Positives = 38/99 (38%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRI 377
V E L CP+C+ ++ P+ H C C + Q TCP R + +R +
Sbjct: 54 VYELLECPVCTNLMYPPIHQCPNGHTLCSNC---KLRVQNTCPTCRYEL--GNIRCL--A 106
Query: 378 LRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNP 494
L + L C GC+ + S H C F P
Sbjct: 107 LEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRP 145
>At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 395
Score = 35.1 bits (77), Expect = 0.13
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 207 ELICPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDR 335
E C +C+ V E ++ C+H F CI W+S + +CPV R
Sbjct: 212 EANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 256
>At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger domain, C3HC4 type
(RING finger) 152633.
Length = 356
Score = 35.1 bits (77), Expect = 0.13
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 132 DVIQSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQA---PACEHAFCRACITEW 302
D + S K+ ++ ++ G V E C +C ++ P C HAF CI W
Sbjct: 132 DGLDESLIKSITVYKYRKMDGFV-ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTW 190
Query: 303 ISRQPTCPVDRQAVTAS 353
+ CP+ R + S
Sbjct: 191 LKSHSNCPLCRAFIVTS 207
>At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 404
Score = 35.1 bits (77), Expect = 0.13
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVP 371
E L C +C ED P C H F CI W+ TCP+ R + L PVP
Sbjct: 140 EALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCR-----ADLIPVP 193
>At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger)
family protein very low similarity to RING-H2 finger
protein RHG1a [Arabidopsis thaliana] GI:3822225;
contains Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 343
Score = 35.1 bits (77), Expect = 0.13
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 204 EELICPICSGVLED--PLQAPACEHAFCRACITEWISRQPTCPV 329
E+ C IC ED L + C H F CI +W+ TCP+
Sbjct: 288 EDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPL 331
>At1g57800.1 68414.m06558 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 660
Score = 35.1 bits (77), Expect = 0.13
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACI 293
+E C IC V+ +P+ P C H FC+AC+
Sbjct: 524 KEFKCQICQKVMTNPVTTP-CAHNFCKACL 552
>At5g57750.1 68418.m07219 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL4 [Arabidopsis thaliana] GI:4928399; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 210
Score = 34.7 bits (76), Expect = 0.17
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 216 CPIC--SGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDR 335
C +C ED L+ P C HAF CI W+ TCP+ R
Sbjct: 122 CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164
>At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 375
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Frame = +3
Query: 153 KKADMGFEIKRFQGDVDEELI---CPICSGVLEDPLQA---PACEHAFCRACITEWISRQ 314
K+ D + +G+ +EE C +C +D + P C H F CI W+
Sbjct: 114 KRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNN 173
Query: 315 PTCPVDRQAVTASQLRPVPRI 377
CP+ R V+ P R+
Sbjct: 174 ANCPLCRTRVSCDTSFPPDRV 194
>At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 376
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 GDVDEELICPICSGVL--EDPLQA-PACEHAFCRACITEWISRQPTCPVDR 335
G E C +C +D L+ P C HAF CI W+ TCP+ R
Sbjct: 135 GAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185
>At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 286
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/96 (26%), Positives = 38/96 (39%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILR 383
E L CPIC P+ H C +C + ++ CP V ++ R + +L
Sbjct: 47 EILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNK---CPACTSPVGHNRCRAMESVLE 103
Query: 384 NLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFN 491
++L C NA GC + H EC F+
Sbjct: 104 SIL----IPCPNAKLGCKKNVSYGKELTHEKECMFS 135
>At5g20910.1 68418.m02483 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 34.7 bits (76), Expect = 0.17
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 207 ELICPICSG--VLEDPLQAPACEHAFCRACITEWISRQPTCPVDR 335
E C IC V+ D +Q C+H F C+ W+ +CP+ R
Sbjct: 227 EAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICR 271
>At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 151
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Frame = +3
Query: 198 VDEELICPICSGVL------EDPLQA--PACEHAFCRACITEWISRQPTCPVDRQAV 344
VD EL CPIC L +D + C H+F CI W+ CP+ R V
Sbjct: 86 VDVELCCPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLRESQDCPICRSTV 142
>At4g10940.1 68417.m01779 PHD finger family protein contains Pfam
profile: PF00097 zinc finger, C3HC4 type
Length = 192
Score = 34.7 bits (76), Expect = 0.17
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
C IC ++ D C+H FC CI W + CP+
Sbjct: 31 CGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMNLCPL 68
>At3g18773.1 68416.m02383 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 220
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDRQAV 344
V EE + + V + L+ P C H F CI +W+++ TCP R +
Sbjct: 126 VGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCL 175
>At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 624
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAP------ACEHAFCRACITEWISRQPTCPVDRQAVTASQLR 362
+E+ P C+ LED + AC H F CI W+ ++ TCP+ R +++
Sbjct: 390 EEKHSSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCR-----AEIP 444
Query: 363 PVP 371
PVP
Sbjct: 445 PVP 447
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAP------ACEHAFCRACITEWISRQPTCPVDRQAVTASQLR 362
+E+ P C+ LE+ + AC H F CI W+ ++ CP+ R +++
Sbjct: 541 EEKHSSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCR-----AEIP 595
Query: 363 PVP 371
PVP
Sbjct: 596 PVP 598
>At2g34990.1 68415.m04293 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 302
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Frame = +3
Query: 216 CPICSGVLED--PLQA-PACEHAFCRACITEWISRQPTCPVDR-----QAVTASQLRPVP 371
C +C ED L+ P C H F C++ W+S TCP+ R Q S L P P
Sbjct: 96 CAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDLCLQPGERSYLNPEP 155
Query: 372 RILRNLLSRL 401
++ + S L
Sbjct: 156 DLVESTNSHL 165
>At1g71020.1 68414.m08197 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 628
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWIS-RQPTCPVDRQAVTASQLRPVPR 374
+ E+ +CPI +++DP + + R+ I WI +CP +Q + L P
Sbjct: 243 IPEDFLCPISLELMKDP-AIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTP-NY 300
Query: 375 ILRNLLSRLCT 407
+LR+L+S+ CT
Sbjct: 301 VLRSLISQWCT 311
>At1g65430.1 68414.m07423 zinc finger protein-related contains weak
similarity to zinc finger proteins and a Pfam:PF01485
IBR domain
Length = 567
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +3
Query: 201 DEELICPIC-SGVLEDPLQAPACEHAFCRAC----ITEWISRQPTC 323
D EL C IC L D L A AC H FC +C IT I+ P C
Sbjct: 123 DGELDCGICFETFLSDKLHAAACGHPFCDSCWEGYITTAINDGPGC 168
>At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 351
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDRQAVTASQLR 362
++E L C +C E +A C H F C+ W+ +CPV R + A + +
Sbjct: 217 IEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAK 273
>At5g06490.1 68418.m00728 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 197
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 PACEHAFCRACITEWISRQPTCPVDRQA-VTASQLRPVPRIL 380
P C H F C+ W+ PTCPV R + + + + PV ++
Sbjct: 146 PDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVV 187
>At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 353
Score = 34.3 bits (75), Expect = 0.22
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 210 LICPICSGVLEDPLQA----PACEHAFCRACITEWISRQPTCPVDRQAV 344
L C +C E P + P C+HAF C+ W+ TCP+ R V
Sbjct: 90 LECAVCLARFE-PTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRV 137
>At4g30370.1 68417.m04315 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 34.3 bits (75), Expect = 0.22
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 258 PACEHAFCRACITEWISRQPTCPVDRQAV 344
P C H F R C+ W+ + TCP+ R V
Sbjct: 132 PRCGHVFHRKCVDLWLIKVSTCPICRDRV 160
>At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 34.3 bits (75), Expect = 0.22
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLE------DPLQAPACEHAFCRACITEWISRQPTCPVDRQA 341
+RF DV C IC ++ D + P CEH F C+ W+ + CP R++
Sbjct: 404 RRFNRDVSRTTDCVICMTAIDLRQHTSDCMVTP-CEHFFHSGCLQRWMDIKMECPTCRRS 462
Query: 342 V 344
+
Sbjct: 463 L 463
>At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 243
Score = 34.3 bits (75), Expect = 0.22
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWI----------SRQPTCPVDRQAVTASQLRP 365
C IC DP+ C H FC CI +W+ Q CPV + +T + L P
Sbjct: 44 CNICLDTAHDPV-VTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVP 102
Query: 366 V 368
+
Sbjct: 103 L 103
>At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger C3HC4 type (RING finger), PF02182: YDG/SRA
domain
Length = 465
Score = 34.3 bits (75), Expect = 0.22
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISR-QPTCPVDRQAVTASQLRPVPRIL 380
E+L C +C+ + + P+ C H FC C +WI + C R + ++ PR+
Sbjct: 105 EDLNCSLCNQLPDRPVTI-LCGHNFCLKCFDKWIDQGNQICATCRSTI-PDKMAANPRVN 162
Query: 381 RNLLS 395
+L+S
Sbjct: 163 SSLVS 167
>At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18
protein, Homo sapiens, PIR:JN0717
Length = 405
Score = 34.3 bits (75), Expect = 0.22
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
C +C +L + + C H FC+ C+T + P C D +++ +
Sbjct: 108 CMLCQALLYESSRCVPCTHVFCKVCLTRF-KDCPLCGADIESIEVDE 153
>At3g02340.1 68416.m00217 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 409
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 213 ICPICSG--VLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
+C +C ++E+ ++ C H + CI W+ + TCPV R + L
Sbjct: 334 VCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDL 384
>At2g41980.1 68415.m05193 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 305
Score = 34.3 bits (75), Expect = 0.22
Identities = 29/121 (23%), Positives = 43/121 (35%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRI 377
V E L CP+C+ ++ P+ H C +C + Q TCP R + +R +
Sbjct: 51 VYELLECPVCTNLMYPPIHQCPNGHTLCSSC---KLRVQNTCPTCRYEL--GNIRCL--A 103
Query: 378 LRNLLSRLCTSCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEAGCGLVIPKDELAD 557
L + L C GC + S H C F + C + L D
Sbjct: 104 LEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVD 163
Query: 558 H 560
H
Sbjct: 164 H 164
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 34.3 bits (75), Expect = 0.22
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 201 DEELICPICSG--VLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQL 359
D + C +C VL+ + C H + CI W++ + +CPV R + A L
Sbjct: 196 DSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDL 250
>At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 219
Score = 34.3 bits (75), Expect = 0.22
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 216 CPICSG--VLEDPLQA-PACEHAFCRACITEWISRQPTCPVDRQAV 344
C IC V E+ ++ P C H F CI +W+S +CP R +
Sbjct: 131 CAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCL 176
>At1g49220.1 68414.m05518 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 251
Score = 34.3 bits (75), Expect = 0.22
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDRQAV 344
+DEE + + V + L+ P C H F CI +W+ + TCP R +
Sbjct: 131 LDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL 180
>At5g18340.1 68418.m02158 U-box domain-containing protein weak
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 456
Score = 33.9 bits (74), Expect = 0.29
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPR 374
+V +E C + ++ DP+ + + + + ITEW++ TCP +Q + L P
Sbjct: 73 EVPKEFKCTLSKTIMIDPVIIFSGQ-TYEKRYITEWLNHDLTCPTAKQVLYRVCLTP-NH 130
Query: 375 ILRNLLSRLC 404
++ L++R C
Sbjct: 131 LINELITRWC 140
>At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 33.9 bits (74), Expect = 0.29
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
C IC G D + P C H+F +CI W+ +CP R ++
Sbjct: 105 CAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family
protein / pentatricopeptide (PPR) repeat-containing
protein contains Pfam domains PF01535: PPR repeat and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1208
Score = 33.9 bits (74), Expect = 0.29
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +3
Query: 171 FEIKRFQ-GDVDEELICPICSGVL--EDPLQA-PACEHAFCRACITEWISRQPTCPVDR- 335
F++K+ Q G C IC G ++ L+ P C H F CI W+ CP+ R
Sbjct: 1037 FKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRA 1096
Query: 336 QAVTASQLRPVPRILRNLLSRLCTSCDNA 422
+ + + +P ++ L R ++ +A
Sbjct: 1097 KIIVPTTQQPEHHVVVMNLDRFTSNVGSA 1125
>At3g61180.1 68416.m06847 zinc finger (C3HC4-type RING finger)
family protein low similarity to RNF6 protein [Mus
musculus] GI:20530241; contains Pfam profile PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 379
Score = 33.9 bits (74), Expect = 0.29
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 198 VDEELICPICSGVLED--PLQAPACEHAFCRACITEWISRQPTCPV 329
+ E+ C IC ED L+ C H F C+ +W+ TCP+
Sbjct: 317 LSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPL 362
>At3g20010.1 68416.m02531 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1047
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWIS-RQPTCPVDR 335
IC C+ E P+ C H FC C+ E+I+ + TCPV R
Sbjct: 750 ICYECNEPPEKPV-VTLCGHIFCYECVLEYITGDENTCPVPR 790
>At2g35000.1 68415.m04294 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 33.9 bits (74), Expect = 0.29
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
C +C ED P C H F C+ W+S TCP+ R + +Q
Sbjct: 135 CAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLNQ 184
>At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 189 QGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVT 347
+GD E IC E+ P C H+F CI +W+ + +CP R+ +T
Sbjct: 96 EGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILT 148
>At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 33.9 bits (74), Expect = 0.29
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 DVDEELICPICSGVLE--DPLQAPACEHAFCRACITEWISRQPTCPVDR 335
D+ +E +C IC E + + C H + +CI W++ TCP+ R
Sbjct: 131 DLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICR 179
>At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 642
Score = 33.9 bits (74), Expect = 0.29
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACI 293
+E C IC VL P+ P C H FC+AC+
Sbjct: 511 KEFKCQICQQVLTLPVTTP-CAHNFCKACL 539
Score = 33.1 bits (72), Expect = 0.51
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISR-QPTCPVDRQAVTASQLRPVPRIL 380
+ L+C C + E P+ P C H C C +W+ + + TC R ++ ++ PRI
Sbjct: 142 DNLMCSFCMQLPERPVTKP-CGHNACLKCFEKWMGQGKRTCGKCR-SIIPEKMAKNPRIN 199
Query: 381 RNLLSRL 401
+L++ +
Sbjct: 200 SSLVAAI 206
>At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 645
Score = 33.9 bits (74), Expect = 0.29
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACI 293
+E C IC VL P+ P C H FC+AC+
Sbjct: 514 KEFKCQICQQVLTLPVTTP-CAHNFCKACL 542
Score = 33.1 bits (72), Expect = 0.51
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWISR-QPTCPVDRQAVTASQLRPVPRIL 380
+ L+C C + E P+ P C H C C +W+ + + TC R ++ ++ PRI
Sbjct: 142 DNLMCSFCMQLPERPVTKP-CGHNACLKCFEKWMGQGKRTCGKCR-SIIPEKMAKNPRIN 199
Query: 381 RNLLSRL 401
+L++ +
Sbjct: 200 SSLVAAI 206
>At1g20823.1 68414.m02608 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 197
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 216 CPICSGVLE--DPLQA-PACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
C IC D L+ P C H F ACI W+ +CP RQ + ++
Sbjct: 111 CAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVAR 160
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 33.9 bits (74), Expect = 0.29
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACI 293
D+ +++ C IC G++ C H FCR CI
Sbjct: 96 DICKDVQCSICLGIIRKTRTVMECLHRFCRECI 128
>At5g61550.1 68418.m07724 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain;
protein kinase 1, PnPK1, Populus nigra, EMBL:AB041503
Length = 845
Score = 33.5 bits (73), Expect = 0.39
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
ICP+ GV+ +P A A + + R I EW+ ++ T PV
Sbjct: 780 ICPLLKGVMNEPCVA-ADGYTYDREAIEEWLRQKDTSPV 817
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 33.5 bits (73), Expect = 0.39
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDRQAVTAS 353
E L C +C E +A C+H F CI W+ +CPV R + +S
Sbjct: 255 EPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSS 306
>At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 33.5 bits (73), Expect = 0.39
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 207 ELICPICSGVLE--DPLQA-PACEHAFCRACITEWISRQPTCPVDRQAV 344
E C IC E + +Q C+H F CI +W+S + +CP R ++
Sbjct: 104 EAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSI 152
>At5g02750.1 68418.m00217 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 283
Score = 33.5 bits (73), Expect = 0.39
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +3
Query: 207 ELICPICSGVLE---DPLQAPACEHAFCRACITEWISRQPTCPVDR 335
E+ C IC + D + P C+H F CI W+S++ TCP R
Sbjct: 211 EVECVICKEEMSEGRDVCEMP-CQHFFHWKCILPWLSKKNTCPFCR 255
>At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 33.5 bits (73), Expect = 0.39
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDR 335
+ E L C IC + +A C+H F CI W+ +CPV R
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCR 282
>At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 33.5 bits (73), Expect = 0.39
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDR 335
+ E L C IC + +A C+H F CI W+ +CPV R
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCR 282
>At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger)
family protein (ATL5) identical to RING-H2 zinc finger
protein ATL5 [Arabidopsis thaliana]
gi|4928401|gb|AAD33583
Length = 257
Score = 33.5 bits (73), Expect = 0.39
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 171 FEIKRFQGDVDEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQA 341
+ +K + ++E C +C E+ + P C H F CI W + +CP+ R
Sbjct: 101 YSVKTHESPLEE---CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAP 157
Query: 342 VTASQ 356
V +Q
Sbjct: 158 VQPAQ 162
>At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 33.5 bits (73), Expect = 0.39
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDRQ 338
CP+C E +A C H + CI W+ + +CPV R+
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRK 228
>At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 33.5 bits (73), Expect = 0.39
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDRQ 338
CP+C E +A C H + CI W+ + +CPV R+
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRK 228
>At3g51325.1 68416.m05618 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097:Zinc
finger, C3HC4 type (RING finger); low similarity to
SPQ06003: Goliath protein (Contains 1 RING-type zinc
finger) (G1 protein), Fruit fly
Length = 90
Score = 33.5 bits (73), Expect = 0.39
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +3
Query: 192 GDVDEELICPICSGVLE--DPLQAPACEHAFCRACITEW--ISRQPTCPVDRQAVT 347
G+ EE C +C +E D +++ C H F C+ W +SR+ CP+ R + T
Sbjct: 18 GEGREEECCSVCLMRMEAKDVIKSLPCSHEFHSLCVDTWFNVSRKICCPLCRFSPT 73
>At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 360
Score = 33.5 bits (73), Expect = 0.39
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 192 GDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
G + EL C +C ++ P C H FC+ C E ++++ CPV
Sbjct: 304 GGGEGELSCCVCMVKIKGASFTP-CGHTFCKLCSKELMAQKGHCPV 348
>At3g05870.1 68416.m00660 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 57
Score = 33.5 bits (73), Expect = 0.39
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 216 CPICSGVLED-PLQAPACEHAFCRACITEWISRQPT---CPVDRQ 338
CP C +D PL AC HAF CI +W++ Q + CP+ R+
Sbjct: 7 CPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRR 51
>At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 227
Score = 33.5 bits (73), Expect = 0.39
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
+E+ C +C E+ + P C H+F CI W + TCP+ R V
Sbjct: 103 EEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153
>At1g53010.1 68414.m06001 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 178
Score = 33.5 bits (73), Expect = 0.39
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 216 CPIC-SG--VLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTAS 353
C IC SG V E+ P C H + CI W+ TCP R+ + S
Sbjct: 130 CAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDLPES 178
>At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9NVW2 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Homo sapiens}; contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 33.5 bits (73), Expect = 0.39
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 198 VDEELICPICSGVLED--PLQAPACEHAFCRACITEWISRQPTCPVDRQAVTAS 353
+ E+ C IC ED L+ C H F +C+ +W+ TCP+ + + S
Sbjct: 307 LQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKS 360
>At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc
finger (C3HC4-type RING finger) family protein identical
to COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|5929906|gb|AAD56636; contains Pfam profile: PF00097
zinc finger, C3HC4 type
Length = 334
Score = 33.1 bits (72), Expect = 0.51
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 171 FEIKRFQGDVDEELICPICSG--VLEDPLQAPACEHAFCRACITEWISRQPTCPVDR 335
FE+ +G++ ++C +C V+ + + C H + CI W+ + +CPV R
Sbjct: 244 FEVSSSEGEM--VMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCR 298
>At5g42200.1 68418.m05136 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 163
Score = 33.1 bits (72), Expect = 0.51
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDR 335
C +C +E P C H F + C W+S CPV R
Sbjct: 104 CAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCR 146
>At5g18330.1 68418.m02157 U-box domain-containing protein weak
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582198; contains Pfam
profile PF04564: U-box domain
Length = 445
Score = 33.1 bits (72), Expect = 0.51
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
+V +E IC + + ++ +P+ A F ++ I EW+ + TCP +Q +
Sbjct: 64 EVPKEFICTLSNKIMIEPMLI-ASGQTFEKSYILEWLKHERTCPRTKQVL 112
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 33.1 bits (72), Expect = 0.51
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 201 DEELICPICSG--VLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
D+++ C IC V D L C+H + +C+ +W+ + CP+
Sbjct: 470 DDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPI 514
>At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 33.1 bits (72), Expect = 0.51
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +3
Query: 216 CPICSGVL---EDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
C IC G E P C H F CI W+ +CP RQ++ Q
Sbjct: 113 CLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQ 162
>At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 497
Score = 33.1 bits (72), Expect = 0.51
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +3
Query: 177 IKRFQGDVDEELICPICSG--VLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTA 350
I + D E+ C IC + D + CEH + C+ EW+ + CP+ +
Sbjct: 435 ITKSPSDNKEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAET 494
Query: 351 S 353
S
Sbjct: 495 S 495
>At4g11360.1 68417.m01832 zinc finger (C3HC4-type RING finger)
family protein (RHA1b) identical to RING-H2 finger
protein RHA1b [Arabidopsis thaliana] GI:3790567
Length = 157
Score = 33.1 bits (72), Expect = 0.51
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +3
Query: 201 DEELICPICSG--VLEDPL-QAPACEHAFCRACITEWI--SRQPTCPVDR 335
D E C +C V +D + Q P C H F C+ WI + TCP+ R
Sbjct: 80 DPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICR 129
>At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 33.1 bits (72), Expect = 0.51
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRACITEWI-----------SRQPTCPVDRQAVT 347
D C IC +++P+ C H FC CI +W+ R CPV + V+
Sbjct: 43 DSNFDCNICLDSVQEPV-VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVS 101
Query: 348 ASQLRPV 368
S L P+
Sbjct: 102 HSTLVPL 108
>At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 33.1 bits (72), Expect = 0.51
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPACEHAFCRACITEWI-----------SRQPTCPVDRQAVT 347
D C IC +++P+ C H FC CI +W+ R CPV + V+
Sbjct: 43 DSNFDCNICLDSVQEPV-VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVS 101
Query: 348 ASQLRPV 368
S L P+
Sbjct: 102 HSTLVPL 108
>At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 33.1 bits (72), Expect = 0.51
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +3
Query: 126 ETDVIQSSTKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWI 305
E + + + +K + F + + D L C IC DP+ C H FC C +
Sbjct: 56 EKKIKKETARKLETDFVLTGEEDDDALPLACSICQNPFLDPV-VTNCNHYFCDKCALKHH 114
Query: 306 SRQPTC 323
+ TC
Sbjct: 115 TENDTC 120
>At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 33.1 bits (72), Expect = 0.51
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 150 TKKADMGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
TKK G R + + +IC + + E + P C+H + CI++W+S CPV
Sbjct: 179 TKKYKFGSIFSRKRAG-ERCVICQLKYKIGERQMNLP-CKHVYHSECISKWLSINKVCPV 236
>At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 33.1 bits (72), Expect = 0.51
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 216 CPICSGVLED--PLQAPACEHAFCRACITEWISRQPTCPVDR 335
C +C ED ++ C+H F + C+ W+ +CPV R
Sbjct: 216 CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
>At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 278
Score = 33.1 bits (72), Expect = 0.51
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWI 305
CPIC G C H FC CI +WI
Sbjct: 22 CPICLGQFLRESYLDTCFHKFCFNCIKQWI 51
>At1g23980.1 68414.m03028 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 369
Score = 33.1 bits (72), Expect = 0.51
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 213 ICPICSGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDR 335
+C +C +D L+ P C HAF CI W+ TCP+ R
Sbjct: 146 VC-LCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 32.7 bits (71), Expect = 0.68
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 264 CEHAFCRACITEWISRQPTCPVDRQ 338
C H F + CI +W+ TCPV R+
Sbjct: 134 CYHVFHQECIDQWLESNKTCPVCRR 158
>At5g20885.1 68418.m02480 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 32.7 bits (71), Expect = 0.68
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPA---CEHAFCRACITEWISRQPTCPVDRQAVTASQLRPVPRILRN 386
C +C G LED + C H F R CI W+ + + R P
Sbjct: 82 CAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGEEDNHRTCPLCRTP 141
Query: 387 LLSRLCTSCDNAP 425
LL+ TSC + P
Sbjct: 142 LLAANTTSCGDWP 154
>At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 301
Score = 32.7 bits (71), Expect = 0.68
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
K+ +G +D C +C E+ P C HAF CI W+ CP+ R V
Sbjct: 124 KKGEGIIDGTE-CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPV 180
>At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 32.7 bits (71), Expect = 0.68
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 216 CPICSGVL---EDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
C IC L E+ ++ C H F + C+ WI + +CP+ R +
Sbjct: 148 CTICLEELCHDEESIETHDCCHVFHKLCLWRWIRTKSSCPLCRHPI 193
>At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING finger protein 38
[Homo sapiens] GI:21666412; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 32.7 bits (71), Expect = 0.68
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 204 EELICPICSGVL--EDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
E+ +C IC + L+ C H F + C+ +W+ +CP+ + V
Sbjct: 359 EDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>At4g09560.1 68417.m01571 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 431
Score = 32.7 bits (71), Expect = 0.68
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = +3
Query: 186 FQGDVDE---ELICPICSGVLE--DPLQAPACEHAFCRACITEWI-SRQPTCPV-DRQAV 344
F G DE ++C IC E D L+ C H F AC+ W+ R+ CPV R A
Sbjct: 204 FNGICDEATTSILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDAR 263
Query: 345 TASQLRP 365
+ S +P
Sbjct: 264 SISTDKP 270
>At3g47180.1 68416.m05123 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 210
Score = 32.7 bits (71), Expect = 0.68
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +3
Query: 189 QGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPV 329
+ ++D ++C + E + C+H + CIT+W+ + CP+
Sbjct: 156 KNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPI 202
>At3g05670.1 68416.m00631 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 883
Score = 32.7 bits (71), Expect = 0.68
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 264 CEHAFCRACITEWISRQPTCPVDRQ 338
C H FC CI EW + CP+ +Q
Sbjct: 432 CSHYFCFTCIMEWSKVESRCPLCKQ 456
>At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 32.7 bits (71), Expect = 0.68
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 204 EELI-CPIC--SGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
E+L+ C IC D L+ P C H F +CI W+ +CP RQ + ++
Sbjct: 99 EKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTR 153
>At1g65040.2 68414.m07372 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 281
Score = 32.7 bits (71), Expect = 0.68
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
C IC + + C H F C+ W+ RQ TCP R V ++
Sbjct: 113 CIICREEMTSAKKL-VCGHLFHVHCLRSWLERQNTCPTCRALVVPAE 158
>At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 389
Score = 32.7 bits (71), Expect = 0.68
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQ 356
C IC + + C H F C+ W+ RQ TCP R V ++
Sbjct: 221 CIICREEMTSAKKL-VCGHLFHVHCLRSWLERQNTCPTCRALVVPAE 266
>At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q06003 Goliath
protein (G1 protein) {Drosophila melanogaster}; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 381
Score = 32.7 bits (71), Expect = 0.68
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 204 EELICPICSGVLEDP--LQAPACEHAFCRACITEWISRQPTCPVDRQAVTAS 353
E+ C IC ED L+ C H F C+ +W+ TCP+ + + S
Sbjct: 321 EDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKS 372
>At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 174
Score = 32.7 bits (71), Expect = 0.68
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +3
Query: 204 EELICPIC----SGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDR 335
E C IC S + D + P C H F CI +W+ CP+ R
Sbjct: 112 ENKTCAICLEDMSQDVHDYQEMPNCPHVFHNDCIYKWLGHSNLCPLCR 159
>At1g27910.1 68414.m03420 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 768
Score = 32.7 bits (71), Expect = 0.68
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWIS-RQPTCPVDRQAVTASQLRPVPRIL 380
EEL CPI ++ DP+ A + R CI +W S TCP Q ++ L P +
Sbjct: 281 EELRCPISLQLMYDPV-IIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTP-NYCV 338
Query: 381 RNLLSRLC 404
+ L+S C
Sbjct: 339 KALISSWC 346
>At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 32.3 bits (70), Expect = 0.90
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
C +C E+ P C+HAF CI W+ CP+ R +
Sbjct: 54 CSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPI 99
>At4g22250.1 68417.m03219 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 214
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITE-WISRQPTCPV 329
+C +C G + P C H FCR C E W++R +CP+
Sbjct: 165 VCCVCMGRKKGAAFIP-CGHTFCRVCSRELWLNR-GSCPL 202
>At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identical
to PRLI-interacting factor K [Arabidopsis thaliana]
GI:11139266; contains Pfam profiles PF03152: Ubiquitin
fusion degradation protein UFD1, PF00096: Zinc finger,
C2H2 type
Length = 561
Score = 32.3 bits (70), Expect = 0.90
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Frame = +3
Query: 426 HGCNAVLKLDSLANHLVECEFNPKRPMPCE-------------AGCGLVIPKDELADH 560
HGC VL+++ NHL CE K P E GCG+V+ K+++ H
Sbjct: 432 HGCGIVLRVEEAKNHL-HCEKCGKALQPTEMEKHLKVFHEPLTCGCGIVLEKEQMVQH 488
>At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 238
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 180 KRFQGDVDEELICPICSGVLE--DPLQAPACEHAFCRACITEWISRQPTCPVDR 335
+ G+ D++ C +C E + + C+H F CI W+ + CPV R
Sbjct: 133 QNLSGEEDDKR-CSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR 185
>At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +3
Query: 216 CPICSGVLEDPLQA---PACEHAFCRACITEWISRQPTCPVDRQAV 344
C +C E+ P C+H F CI W TCP+ R V
Sbjct: 119 CAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV 164
>At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 492
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 216 CPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
C IC + + + C H F C+ W+ RQ TCP R V
Sbjct: 292 CIICREEMTNAKKL-ICGHLFHVHCLRSWLERQQTCPTCRALV 333
>At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 315
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 201 DEELICPICSGVLEDPLQAPA--CEHAFCRACITEWISRQPTCPVDR 335
D L C +C E ++A C+H F C+ W+ +CPV R
Sbjct: 220 DSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 266
>At3g04460.1 68416.m00473 Pex2/Pex12 N-terminal domain-containing
protein similar to SP|O00623 Peroxisome assembly protein
12 (Peroxin-12) (Peroxisome assembly factor-3) (PAF-3)
{Homo sapiens}; contains Pfam profile PF04757: Pex2 /
Pex12 amino terminal region
Length = 393
Score = 32.3 bits (70), Expect = 0.90
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAVTASQLR 362
+C +C +P FC +C+ +++S+ CPV + Q+R
Sbjct: 338 LCALCLQKRANPSVVTVSGFVFCYSCVFKYVSKYKRCPVTLIPASVDQIR 387
>At1g71980.1 68414.m08320 protease-associated zinc finger
(C3HC4-type RING finger) family protein identical to
ReMembR-H2 protein JR702 [Arabidopsis thaliana]
gi|6942149|gb|AAF32326; contains Pfam domain, PF02225:
protease-associated (PA) domain and Pfam domain,
PF00097: Zinc finger, C3HC4 type (RING finger);
identical to cDNA ReMembR-H2 protein JR702 mRNA, partial
cds GI:6942148
Length = 448
Score = 32.3 bits (70), Expect = 0.90
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = +3
Query: 186 FQGDVDEELICPIC--SGVLEDPLQAPACEHAFCRACITEWISRQPT-CPVDRQAVTASQ 356
F D C IC + D L+ C H F AC+ W++ T CPV ++ S
Sbjct: 222 FHEDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTST 281
Query: 357 LRPVPRILRNLLSRLCTS 410
P LLS +S
Sbjct: 282 GEPPASESTPLLSSAASS 299
>At1g62370.1 68414.m07037 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITE-WISRQPTCPVDRQAV 344
+C +C G + P C H +CR C E W++R TCP+ +++
Sbjct: 155 LCCVCMGREKGAAFIP-CGHTYCRVCSREIWMNR-GTCPLCNRSI 197
>At1g24440.1 68414.m03079 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812
Length = 251
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 195 DVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV 344
D++ E C IC + P C HA C C W ++ +CP R ++
Sbjct: 148 DLEREDECGICLEPCTK-MVLPNCCHAMCIKCYRNWNTKSESCPFCRGSI 196
>At5g60820.1 68418.m07630 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 419
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 201 DEELICPICSGVL---EDPLQAPACEHAFCRACITEWISRQPTCPVDR 335
D+ + C +C + ++ + P C H + CI W+ + TCPV R
Sbjct: 367 DDAVCCAVCKEEMIVGKEVAELP-CRHKYHSECIVPWLGIRNTCPVCR 413
>At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 493
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 210 LICPICSGVLE---DPLQAPACEHAFCRACITEWISRQPTCPVDR 335
L+C IC + + Q P C H + CI W+S + +CP+ R
Sbjct: 348 LVCAICKELFSLRNETTQLP-CLHLYHAHCIVPWLSARNSCPLCR 391
>At3g11950.1 68416.m01473 UbiA prenyltransferase family protein
contains Pfam profile PF01040: UbiA prenyltransferase
family
Length = 954
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 408 SCDNAPHGCNAVLKLDSLANHLVECEFNPKRPMPCEAGCGLVIPKDELADHNCV 569
+C+N GC AV + + NH C F + +PCE C I + ++ D +C+
Sbjct: 194 NCEN--EGCTAVFCANQMENHDSVCPF---KIIPCEQNCSESIMRRDM-DRHCI 241
>At2g17730.1 68415.m02054 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger) domain; similar to RING-H2 finger
protein RHA3a (GI:3790573) [Arabidopsis thaliana];
similar to ReMembR-H2 protein JR700 (GI:6942147)
[Arabidopsis thaliana]
Length = 241
Score = 31.9 bits (69), Expect = 1.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 258 PACEHAFCRACITEWISRQPTCPVDRQAV 344
P C H F CI W+ R +CP+ R+ +
Sbjct: 213 PHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>At1g49210.1 68414.m05517 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 225
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 198 VDEELICPICSGVLEDPLQA-PACEHAFCRACITEWISRQPTCPVDRQAV 344
+ EE + + V + L+ P C H F CI +W+ TCP R +
Sbjct: 131 IGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCL 180
>At1g24330.1 68414.m03069 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 771
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 204 EELICPICSGVLEDPLQAPACEHAFCRACITEWIS-RQPTCPVDRQAVTASQLRP 365
EEL CPI ++ DP+ A + R CI +W S +CP +Q + L P
Sbjct: 277 EELRCPISLQLMYDPV-IIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTP 330
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 213 ICPICSGVLEDPLQAPACEHAFCRACITEWISRQPT-CPV 329
IC IC+ +D + + C H FC CI E ++R CP+
Sbjct: 918 ICGICNVAPKDAVVS-LCGHVFCNQCICECLTRDNNQCPL 956
>At5g20570.1 68418.m02442 ring-box protein-related similar to
ring-box protein 1 GI:4769004 from [Homo sapiens]
Length = 118
Score = 31.5 bits (68), Expect = 1.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 264 CEHAFCRACITEWISRQPTCPVD 332
C HAF CI+ W+ + CP+D
Sbjct: 85 CNHAFHFHCISRWLKTRQVCPLD 107
>At4g35840.1 68417.m05091 zinc finger (C3HC4-type RING finger)
family protein contains a TG non-consensus donor splice
site at exon 2; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 31.5 bits (68), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 258 PACEHAFCRACITEWISRQPTCPVDRQ 338
P C H F CI W+ R +CP+ R+
Sbjct: 208 PHCHHMFHLPCIDNWLFRHGSCPMCRR 234
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,297,991
Number of Sequences: 28952
Number of extensions: 445626
Number of successful extensions: 1386
Number of sequences better than 10.0: 317
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4221703296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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