Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G05_e39_13.seq
         (1545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   2.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   2.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   4.6  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    23   6.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 427  TTATSPSWLTTVTCVKTSRYRTAISAYNCVPTLT 528
            +T TSP W TT T  +T+  R   ++    PT T
Sbjct: 1045 STTTSP-WWTTTTTRRTTTTRPTTTSTTTRPTTT 1077


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 225 GFVMLKSRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN 335
           GF+++ +   KIV +S +     GH +  L+G  IFN
Sbjct: 114 GFLLILTPNGKIVFVSHTVEHLLGHLQTDLMGQSIFN 150


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 167 GLEMCIFNVTHCVVCTEFQL 108
           G+ + IFN  HC + TE  L
Sbjct: 807 GVFLTIFNAAHCYLATELVL 826


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 173 VSGLEMCIFNVTHCVVCTEFQL 108
           +SG+   +FNV  C + TE  L
Sbjct: 168 LSGIFFTVFNVAQCYLTTELVL 189


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 184 EAPESPVSKCVSSMSPIVL 128
           EAP  PV + + S++P+VL
Sbjct: 55  EAPCDPVGRRLKSLAPLVL 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,445
Number of Sequences: 336
Number of extensions: 6065
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46500950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)