BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030623sawa_G04_e31_14.seq (1561 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 182 5e-46 04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 182 5e-46 04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 182 9e-46 08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 173 4e-43 04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 170 2e-42 07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 137 3e-32 08_02_0383 - 16539472-16539633,16543044-16543205 44 4e-04 04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 37 0.050 03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 29 10.0 01_05_0586 + 23443371-23444645 29 10.0 >07_03_0920 - 22603868-22603964,22604110-22604222,22604281-22604429, 22604732-22604832,22604917-22604957,22605584-22605595 Length = 170 Score = 182 bits (444), Expect = 5e-46 Identities = 90/148 (60%), Positives = 109/148 (73%), Gaps = 10/148 (6%) Frame = +2 Query: 86 MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262 MA+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREA+EGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVH 415 FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH N+ H Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120 Query: 416 LSPCFRDVEIGDIVTIGECRPLSKTVRF 499 +SPCFR V+ GD V IG+CRPLSKTVRF Sbjct: 121 VSPCFR-VKEGDHVIIGQCRPLSKTVRF 147 >04_04_1134 + 31137326-31137337,31137964-31138004,31138089-31138189, 31138489-31138637,31138696-31138808,31138954-31139050 Length = 170 Score = 182 bits (444), Expect = 5e-46 Identities = 90/148 (60%), Positives = 109/148 (73%), Gaps = 10/148 (6%) Frame = +2 Query: 86 MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262 MA+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREA+EGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVH 415 FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH N+ H Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120 Query: 416 LSPCFRDVEIGDIVTIGECRPLSKTVRF 499 +SPCFR V+ GD V IG+CRPLSKTVRF Sbjct: 121 VSPCFR-VKEGDHVIIGQCRPLSKTVRF 147 >04_04_0417 - 25052305-25052398,25052583-25052672,25052740-25052905, 25053547-25053647,25053735-25053775,25054170-25054181 Length = 167 Score = 182 bits (442), Expect = 9e-46 Identities = 90/146 (61%), Positives = 108/146 (73%), Gaps = 8/146 (5%) Frame = +2 Query: 86 MADQTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262 MA+QTER+F KQP VFL KK G K + R+ K++GLGFKTPREA+EGTYIDKKCP Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60 Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR-------FEKRHRNMSVHLS 421 FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R +EKRH N+ H+S Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120 Query: 422 PCFRDVEIGDIVTIGECRPLSKTVRF 499 PCFR V+ GD V IG+CRPLSKTVRF Sbjct: 121 PCFR-VKEGDHVIIGQCRPLSKTVRF 145 >08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627, 6236718-6236889,6236994-6237249,6238015-6238073, 6238693-6238782,6238869-6239013,6239598-6239712, 6240690-6240701 Length = 512 Score = 173 bits (420), Expect = 4e-43 Identities = 78/123 (63%), Positives = 95/123 (77%) Frame = +2 Query: 131 FLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVV 310 F +K G G K + R+ K++GLGFKTPREA+EGTYIDKKCPFTG VSIRGRI+ G Sbjct: 8 FSPKKSGKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTC 67 Query: 311 QKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 490 KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKT Sbjct: 68 HSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKT 126 Query: 491 VRF 499 VRF Sbjct: 127 VRF 129 >04_04_1135 + 31140032-31140043,31140552-31140592,31140680-31140780, 31141113-31141419,31141565-31141661 Length = 185 Score = 170 bits (414), Expect = 2e-42 Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 25/163 (15%) Frame = +2 Query: 86 MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262 MA+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREA+EGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 379 FTG VSIRGRI+ G KM RTI++RR+YLH++ KY Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120 Query: 380 ---RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 499 R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRF Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRF 162 >07_03_0919 - 22594980-22595111,22595398-22595427,22595522-22595587, 22596021-22596107,22596868-22596921,22597696-22597762, 22598099-22598215,22598536-22598637,22598784-22598902, 22598966-22599049,22599220-22599354,22599470-22599505, 22599581-22599700,22600557-22600645,22601507-22601596, 22601629-22601802,22602135-22602235,22602323-22602363, 22602872-22602883 Length = 551 Score = 137 bits (331), Expect = 3e-32 Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 1/100 (1%) Frame = +2 Query: 86 MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262 MA+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREA+EGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 382 FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100 >08_02_0383 - 16539472-16539633,16543044-16543205 Length = 107 Score = 43.6 bits (98), Expect = 4e-04 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +2 Query: 296 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 475 + G+V KMQ+++V+ D L + YNR+ KR H D IGD V + R Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKLDPSR 61 Query: 476 PLSK 487 PLSK Sbjct: 62 PLSK 65 >04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278, 35406487-35406564,35406638-35406718,35407300-35407350, 35407788-35407933,35408169-35408235,35408328-35408387, 35408472-35408501,35408776-35408835,35408936-35409052, 35409790-35409903,35410068-35410166,35410572-35410697, 35410774-35410848,35410958-35411029,35411167-35411277, 35411760-35411843,35413149-35413256,35414207-35414308, 35414393-35414455,35414524-35414598,35414901-35414972, 35415063-35415187,35415251-35415302,35415380-35415448, 35415525-35415540,35415941-35415989,35416607-35417180 Length = 1077 Score = 36.7 bits (81), Expect = 0.050 Identities = 23/68 (33%), Positives = 33/68 (48%) Frame = +2 Query: 296 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 475 LTG V K +T+ + L PKY R E+ + H P ++GD+V + R Sbjct: 972 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELRRSR 1029 Query: 476 PLSKTVRF 499 P+SKT F Sbjct: 1030 PISKTKHF 1037 >03_05_0248 + 22348504-22348568,22349064-22349371,22349476-22350039, 22350082-22350128,22351244-22351715,22352349-22352611 Length = 572 Score = 29.1 bits (62), Expect = 10.0 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +2 Query: 230 VEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKY 376 V GT PFTG++S G + + KM + +V +DYLH K+ Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510 >01_05_0586 + 23443371-23444645 Length = 424 Score = 29.1 bits (62), Expect = 10.0 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 342 SGAIISITCLNTTDLRSDTGTCLFIYRLASGTWKS 446 +GA S TCLN T+ S G Y ++ G W S Sbjct: 35 TGASFSRTCLNLTNAVSGIGVLSMPYAVSQGGWLS 69 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,123,558 Number of Sequences: 37544 Number of extensions: 585157 Number of successful extensions: 1136 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1083 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1121 length of database: 14,793,348 effective HSP length: 85 effective length of database: 11,602,108 effective search space used: 5035314872 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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