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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G04_e31_14.seq
         (1561 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044...   182   5e-46
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381...   182   5e-46
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529...   182   9e-46
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623...   173   4e-43
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407...   170   2e-42
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955...   137   3e-32
08_02_0383 - 16539472-16539633,16543044-16543205                       44   4e-04
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062...    37   0.050
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500...    29   10.0 
01_05_0586 + 23443371-23444645                                         29   10.0 

>07_03_0920 -
           22603868-22603964,22604110-22604222,22604281-22604429,
           22604732-22604832,22604917-22604957,22605584-22605595
          Length = 170

 Score =  182 bits (444), Expect = 5e-46
 Identities = 90/148 (60%), Positives = 109/148 (73%), Gaps = 10/148 (6%)
 Frame = +2

Query: 86  MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262
           MA+QTE++F KQP VFL+ KK G G K  +   R+ K +GLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVH 415
           FTG VSIRGRI+ G     KM RTI++RR+YLH++ KY          R+EKRH N+  H
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120

Query: 416 LSPCFRDVEIGDIVTIGECRPLSKTVRF 499
           +SPCFR V+ GD V IG+CRPLSKTVRF
Sbjct: 121 VSPCFR-VKEGDHVIIGQCRPLSKTVRF 147


>04_04_1134 +
           31137326-31137337,31137964-31138004,31138089-31138189,
           31138489-31138637,31138696-31138808,31138954-31139050
          Length = 170

 Score =  182 bits (444), Expect = 5e-46
 Identities = 90/148 (60%), Positives = 109/148 (73%), Gaps = 10/148 (6%)
 Frame = +2

Query: 86  MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262
           MA+QTE++F KQP VFL+ KK G G K  +   R+ K +GLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVH 415
           FTG VSIRGRI+ G     KM RTI++RR+YLH++ KY          R+EKRH N+  H
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120

Query: 416 LSPCFRDVEIGDIVTIGECRPLSKTVRF 499
           +SPCFR V+ GD V IG+CRPLSKTVRF
Sbjct: 121 VSPCFR-VKEGDHVIIGQCRPLSKTVRF 147


>04_04_0417 -
           25052305-25052398,25052583-25052672,25052740-25052905,
           25053547-25053647,25053735-25053775,25054170-25054181
          Length = 167

 Score =  182 bits (442), Expect = 9e-46
 Identities = 90/146 (61%), Positives = 108/146 (73%), Gaps = 8/146 (5%)
 Frame = +2

Query: 86  MADQTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262
           MA+QTER+F KQP VFL  KK   G K  +   R+ K++GLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60

Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR-------FEKRHRNMSVHLS 421
           FTG VSIRGRI+ G     KM RTI++RR+YLH++ KY R       +EKRH N+  H+S
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120

Query: 422 PCFRDVEIGDIVTIGECRPLSKTVRF 499
           PCFR V+ GD V IG+CRPLSKTVRF
Sbjct: 121 PCFR-VKEGDHVIIGQCRPLSKTVRF 145


>08_01_0706 -
           6235817-6235988,6236028-6236338,6236421-6236627,
           6236718-6236889,6236994-6237249,6238015-6238073,
           6238693-6238782,6238869-6239013,6239598-6239712,
           6240690-6240701
          Length = 512

 Score =  173 bits (420), Expect = 4e-43
 Identities = 78/123 (63%), Positives = 95/123 (77%)
 Frame = +2

Query: 131 FLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVV 310
           F  +K G G K  +   R+ K++GLGFKTPREA+EGTYIDKKCPFTG VSIRGRI+ G  
Sbjct: 8   FSPKKSGKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTC 67

Query: 311 QKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 490
              KM RTI++RR+YLH++ KY R+EKRH N+  H+SPCFR V+ GD V IG+CRPLSKT
Sbjct: 68  HSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKT 126

Query: 491 VRF 499
           VRF
Sbjct: 127 VRF 129


>04_04_1135 +
           31140032-31140043,31140552-31140592,31140680-31140780,
           31141113-31141419,31141565-31141661
          Length = 185

 Score =  170 bits (414), Expect = 2e-42
 Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 25/163 (15%)
 Frame = +2

Query: 86  MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262
           MA+QTE++F KQP VFL+ KK G G K  +   R+ K +GLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 379
           FTG VSIRGRI+ G     KM RTI++RR+YLH++ KY                      
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120

Query: 380 ---RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 499
              R+EKRH N+  H+SPCFR V+ GD V IG+CRPLSKTVRF
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRF 162


>07_03_0919 -
           22594980-22595111,22595398-22595427,22595522-22595587,
           22596021-22596107,22596868-22596921,22597696-22597762,
           22598099-22598215,22598536-22598637,22598784-22598902,
           22598966-22599049,22599220-22599354,22599470-22599505,
           22599581-22599700,22600557-22600645,22601507-22601596,
           22601629-22601802,22602135-22602235,22602323-22602363,
           22602872-22602883
          Length = 551

 Score =  137 bits (331), Expect = 3e-32
 Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = +2

Query: 86  MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262
           MA+QTE++F KQP VFL+ KK G G K  +   R+ K +GLGFKTPREA+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 382
           FTG VSIRGRI+ G     KM RTI++RR+YLH++ KY R
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100


>08_02_0383 - 16539472-16539633,16543044-16543205
          Length = 107

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 24/64 (37%), Positives = 33/64 (51%)
 Frame = +2

Query: 296 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 475
           + G+V   KMQ+++V+  D L +   YNR+ KR      H      D  IGD V +   R
Sbjct: 4   VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKLDPSR 61

Query: 476 PLSK 487
           PLSK
Sbjct: 62  PLSK 65


>04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278,
            35406487-35406564,35406638-35406718,35407300-35407350,
            35407788-35407933,35408169-35408235,35408328-35408387,
            35408472-35408501,35408776-35408835,35408936-35409052,
            35409790-35409903,35410068-35410166,35410572-35410697,
            35410774-35410848,35410958-35411029,35411167-35411277,
            35411760-35411843,35413149-35413256,35414207-35414308,
            35414393-35414455,35414524-35414598,35414901-35414972,
            35415063-35415187,35415251-35415302,35415380-35415448,
            35415525-35415540,35415941-35415989,35416607-35417180
          Length = 1077

 Score = 36.7 bits (81), Expect = 0.050
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = +2

Query: 296  LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 475
            LTG V   K  +T+ +    L   PKY R E+  +    H  P     ++GD+V +   R
Sbjct: 972  LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELRRSR 1029

Query: 476  PLSKTVRF 499
            P+SKT  F
Sbjct: 1030 PISKTKHF 1037


>03_05_0248 +
           22348504-22348568,22349064-22349371,22349476-22350039,
           22350082-22350128,22351244-22351715,22352349-22352611
          Length = 572

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 230 VEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKY 376
           V GT      PFTG++S  G  +   + KM  +   +V  +DYLH   K+
Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510


>01_05_0586 + 23443371-23444645
          Length = 424

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 342 SGAIISITCLNTTDLRSDTGTCLFIYRLASGTWKS 446
           +GA  S TCLN T+  S  G     Y ++ G W S
Sbjct: 35  TGASFSRTCLNLTNAVSGIGVLSMPYAVSQGGWLS 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,123,558
Number of Sequences: 37544
Number of extensions: 585157
Number of successful extensions: 1136
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5035314872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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