Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G04_e31_14.seq
         (1561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   188   5e-49
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   7.8  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  188 bits (457), Expect = 5e-49
 Identities = 94/139 (67%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
 Frame = +2

Query: 86  MADQTE-RSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 262
           MADQ   R+FQKQ  + LNRK    V R +K LR H  +GLGFKTP+EA+ GTYIDKKCP
Sbjct: 1   MADQQNIRAFQKQLGINLNRKN---VSR-KKGLRMHHSIGLGFKTPKEAITGTYIDKKCP 56

Query: 263 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 442
           FTG++SIRGRILTGVV+K  +   + IRRDYL ++ KY+ FEKR+RNM +HLSPCFRDVE
Sbjct: 57  FTGHISIRGRILTGVVRKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVE 114

Query: 443 IGDIVTIGECRPLSKTVRF 499
            GDIVT+GECRPLSKTVRF
Sbjct: 115 AGDIVTLGECRPLSKTVRF 133


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 86  MADQTERSFQKQPTVFLNRKKGIGVK 163
           MAD T+R++ + P +F++   G  +K
Sbjct: 616 MADGTQRAYVRLPAMFVSELDGTKIK 641


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,130,773
Number of Sequences: 2352
Number of extensions: 20547
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183690540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)