Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G03_e23_13.seq
         (1560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   6.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   8.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   8.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   8.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   8.1  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 506 IRIKAPWIKTSFYGDYDTYVI 568
           ++IK  WIK+  YG   T+ I
Sbjct: 351 VQIKMDWIKSKGYGGAMTWAI 371


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +2

Query: 473 DNDLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPG 574
           D     + G  +R++ P +  + YG    + +PG
Sbjct: 70  DEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPG 103


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +2

Query: 473 DNDLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPG 574
           D     + G  +R++ P +  + YG    + +PG
Sbjct: 384 DEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPG 417


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +2

Query: 473 DNDLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPG 574
           D     + G  +R++ P +  + YG    + +PG
Sbjct: 617 DEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPG 650


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +2

Query: 473 DNDLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPG 574
           D     + G  +R++ P +  + YG    + +PG
Sbjct: 617 DEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPG 650


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,393
Number of Sequences: 336
Number of extensions: 5305
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47013075
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)