Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G03_e23_13.seq
         (1560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         25   4.5  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   4.5  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   4.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   5.9  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 524 WIKTSFYGDYDTYVIPG 574
           WI TS +G Y  +++PG
Sbjct: 5   WIPTSVHGPYPPHMVPG 21


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -3

Query: 862 QHPVSQHLQQYRGRTLHXTTVSGAMDHFQTVDNFRFNSHR 743
           Q+ V  H+  Y G           M   +T D+F FN H+
Sbjct: 270 QYNVWVHVDAYAGSAFICPEYRYLMKGIETADSFNFNPHK 309


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -3

Query: 862 QHPVSQHLQQYRGRTLHXTTVSGAMDHFQTVDNFRFNSHR 743
           Q+ V  H+  Y G           M   +T D+F FN H+
Sbjct: 301 QYNVWVHVDAYAGSAFICPEYRYLMKGIETADSFNFNPHK 340


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 545 GDYDTYVIPGSNGLATLGGVRQYDSYNLQVCK 640
           G YD   +P +    T   V Q+  Y+L+ CK
Sbjct: 673 GKYDCACLPPATHELTPEAVHQWAQYDLRTCK 704


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,205,705
Number of Sequences: 2352
Number of extensions: 23012
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183690540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)