Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_G03_e23_13.seq
(1560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical... 111 1e-24
AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid ... 111 1e-24
Z81484-2|CAB03970.2| 334|Caenorhabditis elegans Hypothetical pr... 97 3e-20
AB275891-1|BAF34314.1| 334|Caenorhabditis elegans D-aspartate o... 97 3e-20
U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical p... 89 1e-17
AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate o... 89 1e-17
AF002197-1|AAB53982.1| 383|Caenorhabditis elegans Hypothetical ... 82 1e-15
AB275893-1|BAF34316.1| 383|Caenorhabditis elegans hypothetical ... 82 1e-15
AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical ... 29 6.7
AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical ... 29 6.7
Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical pr... 29 8.9
U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical pr... 29 8.9
AL132949-32|CAB97240.2| 209|Caenorhabditis elegans Hypothetical... 29 8.9
>AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical
protein Y69A2AR.5 protein.
Length = 322
Score = 111 bits (267), Expect = 1e-24
Identities = 59/175 (33%), Positives = 103/175 (58%), Gaps = 1/175 (0%)
Frame = +2
Query: 290 KYGSYFLTLKVESDKYLPWNEKAFEIDGGKIVKSKVDSLRSLSK-FDLVFNCTGMGAKYL 466
K+G ++ T +E Y+ W F +GGK K K++++ +++ +D+ NCTG+G++ L
Sbjct: 125 KFGIFYTTWYLEPTPYIKWCTDKFLKNGGKFKKQKIENIDDVARSYDVTVNCTGLGSRAL 184
Query: 467 CNDNDLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPGSNGLATLGGVRQYDSYNLQVCKHD 646
D ++ P RGQ++++ P +K F+ D D Y ++ TLGG + ++L +
Sbjct: 185 IGDKEVYPTRGQILKVSCPRVK-HFFID-DKYYALLNDSTITLGGTFEAHQWDLTINSEL 242
Query: 647 AAAILERCYNLVPSLKGAEIISHKVGLRPHRTPVRVEAEIVDSLKVVHCSGHGGT 811
+ IL+ + +PSL+ A+I+S V +RP R VR++AE+ SL VH GHGG+
Sbjct: 243 SQKILKENIHNIPSLRTAQILSSHVDMRPSRGTVRLQAELGRSL--VHNYGHGGS 295
>AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid
oxidase protein.
Length = 322
Score = 111 bits (267), Expect = 1e-24
Identities = 59/175 (33%), Positives = 103/175 (58%), Gaps = 1/175 (0%)
Frame = +2
Query: 290 KYGSYFLTLKVESDKYLPWNEKAFEIDGGKIVKSKVDSLRSLSK-FDLVFNCTGMGAKYL 466
K+G ++ T +E Y+ W F +GGK K K++++ +++ +D+ NCTG+G++ L
Sbjct: 125 KFGIFYTTWYLEPTPYIKWCTDKFLKNGGKFKKQKIENIDDVARSYDVTVNCTGLGSRAL 184
Query: 467 CNDNDLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPGSNGLATLGGVRQYDSYNLQVCKHD 646
D ++ P RGQ++++ P +K F+ D D Y ++ TLGG + ++L +
Sbjct: 185 IGDKEVYPTRGQILKVSCPRVK-HFFID-DKYYALLNDSTITLGGTFEAHQWDLTINSEL 242
Query: 647 AAAILERCYNLVPSLKGAEIISHKVGLRPHRTPVRVEAEIVDSLKVVHCSGHGGT 811
+ IL+ + +PSL+ A+I+S V +RP R VR++AE+ SL VH GHGG+
Sbjct: 243 SQKILKENIHNIPSLRTAQILSSHVDMRPSRGTVRLQAELGRSL--VHNYGHGGS 295
>Z81484-2|CAB03970.2| 334|Caenorhabditis elegans Hypothetical
protein C47A10.5 protein.
Length = 334
Score = 97.1 bits (231), Expect = 3e-20
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 10/204 (4%)
Frame = +2
Query: 227 NIVPIYRAVENDE-LTLCGEGWKYGSYFLTLKVESDKYLPWNEKAFEIDGGKIVKSKVDS 403
+IV +R +E E L L ++ ++ E +KY+P+ + + G + + KV
Sbjct: 106 DIVYNFRFLEKREILDLFPNPSEHCIHYTAFASEGNKYVPYLKFQCQARGVEFLHRKVRD 165
Query: 404 LRSLSK--FDLVFNCTGMGAKYLCNDNDLV-PIRGQVIRIKAPWIKTSFYGDYDTYVIPG 574
L L+ +D++ NC G+ L D+D V PIRG V+ ++A W K Y D+ T+ IP
Sbjct: 166 LEELANEGYDVIVNCAGLSGGTLAGDDDSVYPIRGVVLDVEAHWHKHFNYKDFITFTIPK 225
Query: 575 SNGLATLGGVRQYDSYNLQVCKHDAAAILERCYNLVPSLKGAEIISHKVGLRPHRTPVRV 754
N + +G V+Q + ++L++ D ILER L P+++ +I+ GLRP R +R+
Sbjct: 226 ENSVV-IGSVKQENRWDLEITDVDRKDILERYVALHPAMREPKILGEWSGLRPARKTIRI 284
Query: 755 EAEIVDSLK------VVHCSGHGG 808
E S K VVH GHGG
Sbjct: 285 EKVEKKSEKSGKKYTVVHHYGHGG 308
>AB275891-1|BAF34314.1| 334|Caenorhabditis elegans D-aspartate
oxidase protein.
Length = 334
Score = 97.1 bits (231), Expect = 3e-20
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 10/204 (4%)
Frame = +2
Query: 227 NIVPIYRAVENDE-LTLCGEGWKYGSYFLTLKVESDKYLPWNEKAFEIDGGKIVKSKVDS 403
+IV +R +E E L L ++ ++ E +KY+P+ + + G + + KV
Sbjct: 106 DIVYNFRFLEKREILDLFPNPSEHCIHYTAFASEGNKYVPYLKFQCQARGVEFLHRKVRD 165
Query: 404 LRSLSK--FDLVFNCTGMGAKYLCNDNDLV-PIRGQVIRIKAPWIKTSFYGDYDTYVIPG 574
L L+ +D++ NC G+ L D+D V PIRG V+ ++A W K Y D+ T+ IP
Sbjct: 166 LEELANEGYDVIVNCAGLSGGTLAGDDDSVYPIRGVVLDVEAHWHKHFNYKDFITFTIPK 225
Query: 575 SNGLATLGGVRQYDSYNLQVCKHDAAAILERCYNLVPSLKGAEIISHKVGLRPHRTPVRV 754
N + +G V+Q + ++L++ D ILER L P+++ +I+ GLRP R +R+
Sbjct: 226 ENSVV-IGSVKQENRWDLEITDVDRKDILERYVALHPAMREPKILGEWSGLRPARKTIRI 284
Query: 755 EAEIVDSLK------VVHCSGHGG 808
E S K VVH GHGG
Sbjct: 285 EKVEKKSEKSGKKYTVVHHYGHGG 308
>U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical
protein F18E3.7a protein.
Length = 334
Score = 88.6 bits (210), Expect = 1e-17
Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Frame = +2
Query: 227 NIVPIYRAVENDE-LTLCGEGWKYGSYFLTLKVESDKYLPWNEKAFEIDGGKIVKSKVDS 403
+IV +R +++ E L + E K+ ++ E +KY+P+ + + + +V S
Sbjct: 109 DIVYNFRFLDDRERLDIFPEPSKHCIHYTAYASEGNKYVPYLKNLLLEQKIEFKQQEVTS 168
Query: 404 LRSLSK--FDLVFNCTGM-GAKYLCNDNDLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPG 574
L +++ +D++ NC G+ G K +D+ PIRG ++ + APW K Y D+ T+ IP
Sbjct: 169 LDAVADAGYDVIVNCAGLYGGKLAGDDDTCYPIRGVILEVDAPWHKHFNYRDFTTFTIPK 228
Query: 575 SNGLATLGGVRQYDSYNLQVCKHDAAAILERCYNLVPSLKGAEIISHKVGLRPHRTPVRV 754
+ + +G +Q + ++L++ D IL+R L P ++ +II LRP R VR+
Sbjct: 229 EHSV-VVGSTKQDNRWDLEITDEDRNDILKRYIALHPGMREPKIIKEWSALRPGRKHVRI 287
Query: 755 EAEIVDSL------KVVHCSGHG 805
EA+ S+ VVH GHG
Sbjct: 288 EAQKRTSVGNSKDYMVVHHYGHG 310
>AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate
oxidase protein.
Length = 334
Score = 88.6 bits (210), Expect = 1e-17
Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Frame = +2
Query: 227 NIVPIYRAVENDE-LTLCGEGWKYGSYFLTLKVESDKYLPWNEKAFEIDGGKIVKSKVDS 403
+IV +R +++ E L + E K+ ++ E +KY+P+ + + + +V S
Sbjct: 109 DIVYNFRFLDDRERLDIFPEPSKHCIHYTAYASEGNKYVPYLKNLLLEQKIEFKQQEVTS 168
Query: 404 LRSLSK--FDLVFNCTGM-GAKYLCNDNDLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPG 574
L +++ +D++ NC G+ G K +D+ PIRG ++ + APW K Y D+ T+ IP
Sbjct: 169 LDAVADAGYDVIVNCAGLYGGKLAGDDDTCYPIRGVILEVDAPWHKHFNYRDFTTFTIPK 228
Query: 575 SNGLATLGGVRQYDSYNLQVCKHDAAAILERCYNLVPSLKGAEIISHKVGLRPHRTPVRV 754
+ + +G +Q + ++L++ D IL+R L P ++ +II LRP R VR+
Sbjct: 229 EHSV-VVGSTKQDNRWDLEITDEDRNDILKRYIALHPGMREPKIIKEWSALRPGRKHVRI 287
Query: 755 EAEIVDSL------KVVHCSGHG 805
EA+ S+ VVH GHG
Sbjct: 288 EAQKRTSVGNSKDYMVVHHYGHG 310
>AF002197-1|AAB53982.1| 383|Caenorhabditis elegans Hypothetical
protein F20H11.5 protein.
Length = 383
Score = 81.8 bits (193), Expect = 1e-15
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Frame = +2
Query: 296 GSYFLTLKVESDKYLPWNEKAFEIDGGKIVKSKVDSLRSL-SKFDLVFNCTGMGAKYLCN 472
G ++ E ++ P+ +K G + + ++ +L L ++FD+V N G+ L
Sbjct: 157 GIHYTAYTSEGLRFCPFLKKELMTKGVRFTQRRIGNLEELGAEFDVVVNSAGLLGGVLAG 216
Query: 473 DN--DLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPGSNGLATLGGVRQYDSYN-LQVCKH 643
D+ ++ PIRG +IR+ APW K Y D+ T IP + + +G V+Q ++ V
Sbjct: 217 DDAGNMKPIRGVLIRVDAPWQKHFLYRDFSTITIPVIDHV-YMGTVKQEGAFGPNNVTSA 275
Query: 644 DAAAILERCYNLVPSLKGAEIISHKVGLRPHRTPVRVEAEIVDS-----LKVVHCSGHGG 808
D I R L PS K ++S VG RP R VRVE +I ++ VVH GH G
Sbjct: 276 DIQDITSRYVALQPSFKRVHMLSSFVGYRPGRKQVRVEKQIRETNGSKKFTVVHNYGHSG 335
>AB275893-1|BAF34316.1| 383|Caenorhabditis elegans hypothetical
protein protein.
Length = 383
Score = 81.8 bits (193), Expect = 1e-15
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Frame = +2
Query: 296 GSYFLTLKVESDKYLPWNEKAFEIDGGKIVKSKVDSLRSL-SKFDLVFNCTGMGAKYLCN 472
G ++ E ++ P+ +K G + + ++ +L L ++FD+V N G+ L
Sbjct: 157 GIHYTAYTSEGLRFCPFLKKELMTKGVRFTQRRIGNLEELGAEFDVVVNSAGLLGGVLAG 216
Query: 473 DN--DLVPIRGQVIRIKAPWIKTSFYGDYDTYVIPGSNGLATLGGVRQYDSYN-LQVCKH 643
D+ ++ PIRG +IR+ APW K Y D+ T IP + + +G V+Q ++ V
Sbjct: 217 DDAGNMKPIRGVLIRVDAPWQKHFLYRDFSTITIPVIDHV-YMGTVKQEGAFGPNNVTSA 275
Query: 644 DAAAILERCYNLVPSLKGAEIISHKVGLRPHRTPVRVEAEIVDS-----LKVVHCSGHGG 808
D I R L PS K ++S VG RP R VRVE +I ++ VVH GH G
Sbjct: 276 DIQDITSRYVALQPSFKRVHMLSSFVGYRPGRKQVRVEKQIRETNGSKKFTVVHNYGHSG 335
>AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical
protein F25G6.7a protein.
Length = 527
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 131 CHRXSLNAGIMPLPTYIFSKENYHVTRNHLI 223
CH L IM LP+Y+ +YH T N ++
Sbjct: 307 CHEFPLMTLIMFLPSYLHDVHHYHSTENGIL 337
>AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical
protein F25G6.7b protein.
Length = 513
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 131 CHRXSLNAGIMPLPTYIFSKENYHVTRNHLI 223
CH L IM LP+Y+ +YH T N ++
Sbjct: 293 CHEFPLMTLIMFLPSYLHDVHHYHSTENGIL 323
>Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical
protein F52H3.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 404 LRSLSKFDLVFNCTGMGAKYLCNDNDLVPIRGQVIRIKAPWIK 532
L S FD+ G+G K+ D + GQ IRI + WI+
Sbjct: 42 LESAKAFDINIEVLGLGEKWNGGDTRIEQGGGQKIRILSDWIE 84
>U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical
protein C05D11.8 protein.
Length = 873
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 399 STLDLTIFPPSISNAFSFQGKYLSLSTFNVRKYDPYFQPSPHNVSSSFS 253
S+ T P +SN +S G +LS FN+ K P QP N S S
Sbjct: 518 SSRSSTSMTPYVSNRYS-NGSHLS-HVFNINKVCPLGQPQEQNADLSLS 564
>AL132949-32|CAB97240.2| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.37 protein.
Length = 209
Score = 29.1 bits (62), Expect = 8.9
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Frame = +2
Query: 317 KVESDKYLPWNEKAFEIDGGKIVKSKVDSL--RSLSKFDLVF--NCTGMGAKYLCNDND- 481
K+ ++ +LP + F+I G + KSK L SL+ D+V N T + + CN ++
Sbjct: 122 KIHTEIFLPAKDSYFKIINGILEKSKSGFLVGDSLTFADIVVVENFTTLDKNHYCNASEQ 181
Query: 482 --LVPIRGQVIRIKA--PWIKT 535
L +R +V I A W++T
Sbjct: 182 PRLTALREKVYAIPAIKHWVET 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,352,459
Number of Sequences: 27780
Number of extensions: 517961
Number of successful extensions: 1089
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4504441732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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