Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_G02_e15_14.seq
         (1535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    25   2.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   3.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   7.9  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 628 YQGAGKKRVFKIAGEGAGRKRLSSLQKELE 717
           +QG G   V+ I  +  GR  +S L +E+E
Sbjct: 247 FQGIGTDNVYLIRTDARGRMDVSHLVEEIE 276


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +3

Query: 339 RRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKT 488
           R K+ +    E   +  + ED+++ + K     E   + +KKE   ++KT
Sbjct: 219 REKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKT 268


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 82  LQXSSRXXCSPGDPLVXRAAAT 17
           L+   R  C    P+V RAAAT
Sbjct: 168 LRSHFRALCQDDTPMVRRAAAT 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,325
Number of Sequences: 336
Number of extensions: 4208
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46193675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)