Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_G02_e15_14.seq
(1535 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 48 5e-06
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 45 3e-05
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 40 7e-04
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 38 0.004
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 33 0.10
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 33 0.10
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 33 0.14
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 32 0.24
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 31 0.32
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.42
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 30 0.74
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 30 0.74
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 30 0.74
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 30 0.98
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 30 0.98
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 29 1.3
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 29 1.3
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 29 1.7
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 1.7
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 29 2.3
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 3.0
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 3.0
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 28 3.0
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 3.9
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 28 3.9
SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces ... 28 3.9
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 28 3.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.2
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 5.2
SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein Usp102|Schi... 27 6.9
SPBC11C11.10 ||SPBC3B8.13c|pseudouridine synthase|Schizosaccharo... 27 9.1
SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 27 9.1
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 47.6 bits (108), Expect = 5e-06
Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +2
Query: 71 RXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAI--AEERRLQSPKKEDRNRRRKKTA 244
R L+ ++++ R KK L+ K+E RR + A ++ L++ ++E+ ++R++
Sbjct: 586 RELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQR 645
Query: 245 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKK-- 418
+ E Q K+++ R++++ ++ R + KK+ R+K A + R + K+
Sbjct: 646 LKRE---QEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRIL 702
Query: 419 EDCNRRRKKTATIEERR 469
E+ RR K EERR
Sbjct: 703 EERKRREKLDKEEEERR 719
Score = 43.2 bits (97), Expect = 1e-04
Identities = 41/190 (21%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Frame = +2
Query: 71 RXLQSPKKEDCNRMKKX*LQSPKKENCNR--RRMKTAIAEERRLQSPK-----KEDRNRR 229
R LQ+ +++ + + L+ ++EN + R +K +E++ K KE+ +R
Sbjct: 555 RVLQAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQR 614
Query: 230 RKKTAIAE---ERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERR 400
R+ +AE ++ L++ ++E+ ++R++ + +R Q K+++ R++++ ++ R
Sbjct: 615 REAERLAEQAAQKALEAKRQEEARKKREEQRL---KREQEKKQQELERQKREEKQKQKER 671
Query: 401 PQPPKKEDCNRRRKKTATIEERRSWKR----EDCNRRRRKTATADERGLMMILVKSTGAS 568
+ KK+ R+K A + R + E+ RR + +ER +L K +
Sbjct: 672 EKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKE--SE 729
Query: 569 KKEDHLSRKK 598
+KE L K
Sbjct: 730 EKERRLREAK 739
Score = 31.5 bits (68), Expect = 0.32
Identities = 46/202 (22%), Positives = 91/202 (45%)
Frame = +3
Query: 159 EE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCN 338
E+ LQ+ +++ +R+ K E + ++ + + R+K ++++ KE+
Sbjct: 553 EQRVLQAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEER 612
Query: 339 RRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQP 518
+R++ AE+ + + + + RKK +R Q K++ R+K EE + Q
Sbjct: 613 QRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQK---REEKQKQ- 668
Query: 519 PMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTIK 698
KE RE++ KK +++ RE+R L +K ++ RR +K K
Sbjct: 669 --KE---------REKKLKKQQQEADREKMAREQR-LREEEEKRILEERKRR---EKLDK 713
Query: 699 SAEGAGRKXTTSLRKKELEEED 764
E R+ L +KE EE++
Sbjct: 714 EEEERRRR---ELLEKESEEKE 732
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 44.8 bits (101), Expect = 3e-05
Identities = 43/227 (18%), Positives = 92/227 (40%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATA 365
+E+ ++R+ +A ++R+Q +K + +RK A ++ K+E + K++
Sbjct: 519 EEEASQRKDAIKLAIQQRIQ--EKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEK 576
Query: 366 EERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED***F 545
+R + K + + K+ A +R K + EK E + + +E
Sbjct: 577 AKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEK---- 632
Query: 546 L*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRKX 725
+ RE K E+K + EE+ K+E ++ R + +K ++ E A R+
Sbjct: 633 --AKREAEEKAKREAEEKAKREAEEK-----AKREAEENAKREAEEKAKREAEENAKREA 685
Query: 726 TTSLRKKELEEEDY*ACGRSWKKKTASPRLKXLQPPKKEDCNXRRKK 866
++++ E A ++ +P +K P + N K
Sbjct: 686 EEKVKRETEENAKRKAEEEGKREADKNPEIKSSAPLASSEANVDTSK 732
Score = 33.5 bits (73), Expect = 0.079
Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEER 259
++ K+E + K+ + K+E + + + +R + K + + K+ A + +
Sbjct: 559 ENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAK 618
Query: 260 RLQSPK-KEDCNRRRKKTAIAEERRLQPPK-KEDCNRRRKKTATAEERRPQPPKKEDCNR 433
R K K + + K+ A + +R K K + + K+ A +R +E R
Sbjct: 619 REAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREA---EEKAKR 675
Query: 434 RRKKTATIEERRSWKREDCNRRRRKTATADER 529
++ A E KRE +RK +R
Sbjct: 676 EAEENAKREAEEKVKRETEENAKRKAEEEGKR 707
Score = 33.1 bits (72), Expect = 0.10
Identities = 33/157 (21%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Frame = +2
Query: 83 SPKKEDCNRMKKX*LQSP---KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRK---KTA 244
SP + N + +P +E ++R+ +A ++R+Q +K + +RK K
Sbjct: 497 SPNPSETNSRAETPTAAPPQISEEEASQRKDAIKLAIQQRIQ--EKAEAEAKRKAEEKAR 554
Query: 245 IAEERRLQSPKKEDCNRRRKKTAIAE-ERRLQPPKKEDCNRRRKKTATAE-ERRPQPPKK 418
+ E + +E R ++ A E E + + +E R ++ A E E + + +
Sbjct: 555 LEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAE 614
Query: 419 EDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 529
E R ++ A E KRE + +R+ +R
Sbjct: 615 EKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKR 651
Score = 31.9 bits (69), Expect = 0.24
Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 2/168 (1%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEER 259
+ K+E + K+ + K+E K E+ + ++ +K R K AEE+
Sbjct: 575 EKAKREAEEKAKREAEEKAKREA--EENAKREAEEKAKREAEEKAKREAEEKAKREAEEK 632
Query: 260 RLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAE-ERRPQPPKKEDCNRR 436
+ +++ +K E + + +E+ R ++ A E E + +E R
Sbjct: 633 AKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRE 692
Query: 437 RKKTATIEERRSWKRE-DCNRRRRKTATADERGLMMILVKSTGASKKE 577
++ A + KRE D N + +A + K T A++ E
Sbjct: 693 TEENAKRKAEEEGKREADKNPEIKSSAPLASSEANVDTSKQTNATEPE 740
Score = 31.1 bits (67), Expect = 0.42
Identities = 41/209 (19%), Positives = 91/209 (43%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
+K + +RK E+ RL++ +E+ R ++ A +R + K + + K+ A
Sbjct: 539 EKAEAEAKRK---AEEKARLEA--EENAKREAEEQA---KREAEEKAKREAEEKAKREAE 590
Query: 363 AEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED*** 542
+ +R + + N +R+ A+ + +K+E + K E+ + + K
Sbjct: 591 EKAKR-----EAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEK----- 640
Query: 543 FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRK 722
+ RE K E+K + EE + K+E ++ +R ++ + AE ++
Sbjct: 641 ---AKREAEEKAKREAEEKAKREAEE-----NAKREA-EEKAKREAEENAKREAEEKVKR 691
Query: 723 XTTSLRKKELEEEDY*ACGRSWKKKTASP 809
T K++ EEE ++ + K+++P
Sbjct: 692 ETEENAKRKAEEEGKREADKNPEIKSSAP 720
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 40.3 bits (90), Expect = 7e-04
Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = +2
Query: 143 ENCNRRRMKTAIAE---ERRLQSPK-KEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT 310
E ++R+ AE E++LQ + +E+R R+++ + E+ Q ++E R ++K
Sbjct: 60 EGNRKKRIYNGSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKI 119
Query: 311 AIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWK 478
A + + L+ +KE R +++ EER + +KE+ R R++ +ER+ K
Sbjct: 120 AAKKMKELEKLEKERI-RLQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQQLK 174
Score = 32.7 bits (71), Expect = 0.14
Identities = 24/101 (23%), Positives = 51/101 (50%)
Frame = +2
Query: 98 DCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPK 277
+ + KK Q ++E R++ + E+ Q ++E + R ++K A + + L+ +
Sbjct: 73 EAGKEKKLQKQRAQEERI-RQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLE 131
Query: 278 KEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERR 400
KE R +++ EER + +KE+ R R++ +ER+
Sbjct: 132 KERI-RLQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 89 KKEDCNRMKKX*-LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRL 265
++++ R+K+ Q ++E R + K A + + L+ +KE R R +++ EER
Sbjct: 91 RQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKE-RIRLQEQQRRKEERDQ 149
Query: 266 QSPKKEDCNRRRKKTAIAEERR 331
+ +KE+ R R++ + +ER+
Sbjct: 150 KLREKEEAQRLRQEQILNKERQ 171
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 628 YQGAGKKRVFKIAGEGAGRKRLSSLQKELEERXLQACGRRSWKKKTIKLAEE 783
Y+G KKR++ + E AG+++ Q+ EER Q R ++K + E+
Sbjct: 59 YEGNRKKRIYNGSAE-AGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQ 109
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/113 (19%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSP-KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
KE+ R+R++ E ++ ++ D + R+K + E+++ ++ + +++
Sbjct: 5 KEEIERKRRQLEGTSELPVKKAFRRGDWEKEREKKYLQEKQQKDEQRELKKRKLEEERLK 64
Query: 363 AEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPP 521
EE++L+ + ++ R + E P P+ K K + +E RL P
Sbjct: 65 YEEKKLRISRLANKESSRNEELLTETTTPSPAVKASPASTKLSVSENDRLSIP 117
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 33.1 bits (72), Expect = 0.10
Identities = 44/221 (19%), Positives = 89/221 (40%)
Frame = +3
Query: 153 IAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKED 332
++ E + +P + D + + K+ A +R+ + K+ EE+R++ +
Sbjct: 216 VSSEVDISTPAENDSSAKGKQAA-GSKRKGPNVTALQKMLEEKRAREEEEQRIREEEARI 274
Query: 333 CNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRL 512
+K+ A EE R + + + + + RKK + + SKK+ +E+ A A+ RL
Sbjct: 275 AEE-EKRLAEVEEARKEEARLKKKEKERKKKEEMKAQGKYLSKKQ---KEQQALAQR-RL 329
Query: 513 QPPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKT 692
Q ++ S E+++K + Y KKK + SG E + +
Sbjct: 330 QQMLESGVRVAGLSNGEKKQKPV-YTNKKKSNRSGTSSISSSGILESSPATSISVDEPQK 388
Query: 693 IKSAEGAGRKXTTSLRKKELEEEDY*ACGRSWKKKTASPRL 815
+ + T + +KE E + A W+ P +
Sbjct: 389 DSKDDSEKVEKETEVERKEENEAEAEAVFDDWEAALEEPEV 429
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 33.1 bits (72), Expect = 0.10
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSPKK--EDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT 310
+K+ + R + E++R+++ ++ +D RRKK + +E++ + + ++ K+
Sbjct: 104 EKQRLEQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKEKKEKERIRLIEEQKHKEN 163
Query: 311 AIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED 424
E+RRL K+E + +RK+ A E+R + K+D
Sbjct: 164 ---EQRRL---KQEQIDAKRKEEE-AREKRMKETFKDD 194
Score = 29.1 bits (62), Expect = 1.7
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Frame = +2
Query: 44 IPRAAGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 223
I ++ S R ++ + R + L+ K+ R+R+K EERR + ++++
Sbjct: 91 IEQSITESQRIFSEKQRLEQERFNRELLEK-KRIEAERQRLKDE--EERRKKELMEKEKK 147
Query: 224 RRRKKTAIAEERRLQSP----KKEDCNRRRKKTAIAEERRLQPPKKED 355
+ + I E++ ++ K+E + +RK+ A E+R++ K+D
Sbjct: 148 EKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEE-AREKRMKETFKDD 194
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPK---KEDCN 338
+L K+ + R+R K EERR + +++ + + I E++ ++ + K++
Sbjct: 116 ELLEKKRIEAERQRLKDE--EERRKKELMEKEKKEKERIRLIEEQKHKENEQRRLKQEQI 173
Query: 339 RRKKKTATAEERRLQPPKKED 401
K+K A E+R++ K+D
Sbjct: 174 DAKRKEEEAREKRMKETFKDD 194
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 32.7 bits (71), Expect = 0.14
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +3
Query: 210 KKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPP 389
KK A+ E+ + + KK + +KK +AE+ + K ++ KK++ A
Sbjct: 159 KKNAVVEKGKSKPSKKSV--KAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAAAV 216
Query: 390 KKEDRNRRRKKTATAEERRP 449
KED+ RKK+ ++ P
Sbjct: 217 IKEDKVSDRKKSKKKPKKTP 236
Score = 29.9 bits (64), Expect = 0.98
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +2
Query: 302 KKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKT--ATIEERRSW 475
KK A+ E+ + +P KK + +KK AE+ K ++ KK+ A E +
Sbjct: 159 KKNAVVEKGKSKPSKKSV--KAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAAAV 216
Query: 476 KREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKKTS 607
+ED R+K+ ++ + S + D +++KK+S
Sbjct: 217 IKEDKVSDRKKSKKKPKKTPVSNSTASQASENASDKKTKEKKSS 260
Score = 29.9 bits (64), Expect = 0.98
Identities = 27/121 (22%), Positives = 55/121 (45%)
Frame = +3
Query: 150 AIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKE 329
A+ E+ K + KK + +KK +AE+ + K ++ KK++ A + KE
Sbjct: 162 AVVEKGKSKPSKKSV--KAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAAAVIKE 219
Query: 330 DCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGR 509
D +KK+ + PKK + A+ + +K+ +G++K A+ ++ +
Sbjct: 220 DKVSDRKKSK-------KKPKKTPVSNSTASQASENASDKKTKEKKSSGKQKIASKKKDQ 272
Query: 510 L 512
L
Sbjct: 273 L 273
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 31.9 bits (69), Expect = 0.24
Identities = 25/114 (21%), Positives = 57/114 (50%)
Frame = +2
Query: 185 ERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNR 364
+R+L+ + + A E+ R+Q +KE R ++ A+ +E++ + + ++ R
Sbjct: 850 KRQLERAIQAQIEYEKSVAAKLEDARIQR-EKEKARRLAEEEALLKEKQERERQLQE-ER 907
Query: 365 RRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADE 526
++ + E R+ Q ED + EE++S K++ +R++RK+ + E
Sbjct: 908 QKMQEEVLEWRKSQQKASED----DMSLSDDEEKQSGKKKKKDRKKRKSKSKQE 957
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 273 RRKKTAIAEERRLQSPKKEDCNRRKK--KTATAEERRLQPPKKEDRNRRRKKTATAEE 440
R +K E +RL+ KE+ +KK K AEE+RLQ + + + +++A A++
Sbjct: 713 RERKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKERAKYAKQMSRESAHADQ 770
Score = 30.7 bits (66), Expect = 0.56
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Frame = +2
Query: 131 SPKK-ENCNRRRMKTAIAE--ERRLQSPKKEDRNR--RRKKTAIAEERRLQSPKKEDCNR 295
SP++ E RR + ++E ER Q +++++ + +R K EE+RL+ KKE+ R
Sbjct: 686 SPEELEEIARRNVDPMVSELSERAAQERERKEQAKEAKRLKKLAKEEKRLK--KKEEKAR 743
Query: 296 RRKKTAIAEERRLQPPKKEDCNRRRKKTATAEE 394
+ AEE+RLQ + + + +++A A++
Sbjct: 744 K------AEEKRLQKERAKYAKQMSRESAHADQ 770
Score = 29.5 bits (63), Expect = 1.3
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +3
Query: 225 AEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAE--ERRLQPPKKE 398
A ERRL + + I R + + E+ RR +E ER Q +++
Sbjct: 657 ALERRLSKAYRMEAQEEAYAINIGGGRVISPEELEEIARRNVDPMVSELSERAAQERERK 716
Query: 399 DRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
++ + K+ + + KKE EK AEE RLQ
Sbjct: 717 EQAKEAKRLKKLAKEEKRLKKKE----EKARKAEEKRLQ 751
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 47 PRAAGXSARXLQS-PKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 223
P + S R Q +KE K+ + +++ ++ K AEE+RLQ + +
Sbjct: 700 PMVSELSERAAQERERKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKERAKYAK 759
Query: 224 RRRKKTAIAEE 256
+ +++A A++
Sbjct: 760 QMSRESAHADQ 770
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.1 bits (67), Expect = 0.42
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 273 RRKKTAIAEERRLQSPKK---EDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEER 443
++ KT++ + + + KK E ++ KK T A + + K D + ++ K
Sbjct: 3 KKDKTSVKKSVKETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRAS 62
Query: 444 RPQPSKKEGAGREKTATAEE 503
P+PSKK ++K+ EE
Sbjct: 63 SPEPSKKSVKKQKKSKKKEE 82
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPK-KEDCNRR 344
K++ K+ + + ++ E S + E+ +KT +E +S E +
Sbjct: 155 KIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDS 214
Query: 345 KKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRL 512
++ ++ + + +++K A E RP K +T T GRL
Sbjct: 215 SSESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITKPSQDSNETCTVFVGRL 270
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 30.3 bits (65), Expect = 0.74
Identities = 27/125 (21%), Positives = 51/125 (40%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK 307
QSP E+ + A A + SP + + + K ++ K +
Sbjct: 15 QSPVSESSSVGGTSPATASS--VVSPNEPKLSGKEAKALKKARKQASRRAKAEAAAANNP 72
Query: 308 TAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRED 487
++EE+++ P K N+++K A ++ PQ + D N + KK ++ + D
Sbjct: 73 PGVSEEKKVAIPNKNS-NQQKK----ASKQNPQNSPETDANLQEKKIFEEKQVSIFSHLD 127
Query: 488 CNRRR 502
RRR
Sbjct: 128 WRRRR 132
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 30.3 bits (65), Expect = 0.74
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 294 AEERRLQSPKKEDCNRRKKKTATA-EERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEG 470
A++ + K D KK+T EE + +PP+ E++ + K + +EG
Sbjct: 74 ADDAKGAQGKGADEKEEKKETIQPPEEVKTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEG 133
Query: 471 AGREKTATAEEGRLQPPMKE 530
G E+ EE + P+++
Sbjct: 134 -GEEEEEEEEEEEITDPLEK 152
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 30.3 bits (65), Expect = 0.74
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 KEDCNRRRKKTAIAEERRLQSPKKEDCNRR-KKKTATAEERRLQPPKKEDRNRRRKKTAT 431
+ED +R + + ++E + + KK ++ KKKT+T PKK ++ ++KK
Sbjct: 147 EEDEDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSAL---DPKKLEKITKKKKKEH 203
Query: 432 AEERRPQPSKKEGAG 476
++ + SKK +G
Sbjct: 204 KKKDKESSSKKRKSG 218
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/95 (16%), Positives = 44/95 (46%)
Frame = +2
Query: 41 WIPRAAGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDR 220
W+ +A R + D + +K S KK++ + +A+ + ++L+ K+ +
Sbjct: 142 WMQKAEEDEDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSAL-DPKKLEKITKKKK 200
Query: 221 NRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE 325
+KK + ++ +S + +++KK + ++
Sbjct: 201 KEHKKKDKESSSKKRKSGSSDKEEKKKKKIKLKDK 235
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/83 (19%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNRR-RKKTAIA---EERRLQSPKKEDCNRRKKK 353
+ED +R + + ++E + + KK ++ +KKT+ + ++L+ K+ KKK
Sbjct: 147 EEDEDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKK 206
Query: 354 TATAEERRLQPPKKEDRNRRRKK 422
+ ++ + + +++KK
Sbjct: 207 DKESSSKKRKSGSSDKEEKKKKK 229
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 29.9 bits (64), Expect = 0.98
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 271 RLQSSFFGDCSLLSSAIAVFFLRRLQSSFFGDCSFHSSAIAVFFLRRLQS 122
R+ SF G SS + L R ++ F DC F+ ++ FF RRL +
Sbjct: 33 RMSRSFSG-----SSVLNEINLSRTKNLFLNDCKFNKNSFEKFFARRLSN 77
Score = 27.5 bits (58), Expect = 5.2
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -2
Query: 340 RLQSSFFGDCSLLSSAIAVFFLRRLQSSFFGDCSLLSSAIAVFFLRRLQSS 188
R+ SF G SS + L R ++ F DC ++ FF RRL +S
Sbjct: 33 RMSRSFSG-----SSVLNEINLSRTKNLFLNDCKFNKNSFEKFFARRLSNS 78
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 29.9 bits (64), Expect = 0.98
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +3
Query: 198 NRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
+++RK +E+ ++ KKE+ +RRKK A +E++ + KKE ++KK
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKEKKEKKKK 472
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +3
Query: 267 NRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRK 419
+++RK +E+ ++ KKE+ +R+KK A +E++ + KKE + +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKEKKEKKKK 472
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/44 (22%), Positives = 27/44 (61%)
Frame = +3
Query: 336 NRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 467
++++K ++E+ + KKE++ R+++ +E++ + KKE
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKE 468
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +2
Query: 221 NRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRK 373
+++RK +E+ ++ KKE+ +RRKK A +E++ + KKE +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKEKKEKKKK 472
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 290 NRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRK 442
+++RK +E+ + KKE+ +RRKK A +E++ + KKE +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEAK-KEKKEKKEKKEKKEKKKK 472
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = +2
Query: 359 NRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKT 511
+++RK ++E+ + KKE+ RRKK A E++ ++++ +++K+
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEEK--RRKKEAKKEKKEKKEKKEKKEKKKKS 473
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 175 NRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKE 306
+++RK +E+ ++ KKE+ +RRKK A +E++ + KKE
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKE 465
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRK 304
+K+ ++K A E + + +K+D+ ++ K E +SPKK+ +++ K
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKKSK 507
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +3
Query: 252 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRK 419
+K+ + K A E + + +K+D +K K + E + PKK+ ++++ K
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKKSK 507
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +3
Query: 213 KTAIAEE-RRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPP 389
+ AI EE +++ K ++KK + R LQ +D + TAT+E L+
Sbjct: 387 RQAIREEVAAVEAAKIRADEEKKKKEREEQVRLLQESADKDAEMNEASTATSENEDLKDD 446
Query: 390 -KKEDRNRRRKKTATAEERRPQPSKKEGAGREK 485
D + ++ + A E PSK + K
Sbjct: 447 LSLADLSSKKTANSQATENNNTPSKAKVKAESK 479
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 29.1 bits (62), Expect = 1.7
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 224 RRRKKTAIAEERRLQSPKKEDCNR--RRKKTAIAEERRLQPPKKEDCNRRRKKTATAEER 397
R + +++E + + K+E+ N+ RK+ A E + KKE K ++
Sbjct: 504 RNKGVIKVSDEAKEKIQKEEEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKE 563
Query: 398 RPQPPKKEDCNRRRKKTATIE 460
R Q KKE+ R KK A IE
Sbjct: 564 REQYAKKEN-ERWDKKIAEIE 583
Score = 27.9 bits (59), Expect = 3.9
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 153 IAEE*KLQSPKKEDCNR--RRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKK 326
+++E K + K+E+ N+ RK+ A E + KKE K + ++ R Q KK
Sbjct: 511 VSDEAKEKIQKEEEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKEREQYAKK 570
Query: 327 EDCNRRKKKTATAE 368
E+ R KK A E
Sbjct: 571 EN-ERWDKKIAEIE 583
Score = 27.1 bits (57), Expect = 6.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 176 IAEERRLQSPKKEDRNR--RRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKK 349
+++E + + K+E+ N+ RK+ A E + KKE K + ++ R Q KK
Sbjct: 511 VSDEAKEKIQKEEEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKEREQYAKK 570
Query: 350 EDCNRRRKKTATAE 391
E+ R KK A E
Sbjct: 571 EN-ERWDKKIAEIE 583
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 270 RRRKKTAIAEERRLQSPKKEDCNR---RKKKTATAEERRLQPPKKEDRNRRRKKTATAEE 440
R + +++E + + K+E+ N+ RK++ E + + K++DR + + T +E
Sbjct: 504 RNKGVIKVSDEAKEKIQKEEEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKE 563
Query: 441 RRPQPSKKEGAGREK 485
R Q +KKE +K
Sbjct: 564 RE-QYAKKENERWDK 577
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 29.1 bits (62), Expect = 1.7
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 4/122 (3%)
Frame = +2
Query: 188 RRLQSPKKEDRNRRRKKTAIAEERRLQSPK----KEDCNRRRKKTAIAEERRLQPPKKED 355
R + SP NR RK + + P E C+ +++ + ++ + D
Sbjct: 349 REIPSPINAQANRARKVLSSTPHYEMIDPDITLAMESCDASKEQPVLVYISKMVAFSERD 408
Query: 356 CNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGL 535
R+K +AEE + K + T +IEE S D N T D++ +
Sbjct: 409 LPNHRRKQLSAEEMKLIRSKLSESIESGINTISIEENVSSTNSD-NLEGSTTDMDDDKDI 467
Query: 536 MM 541
++
Sbjct: 468 LI 469
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 28.7 bits (61), Expect = 2.3
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPK---KEDCNRR--- 344
K + +RR ++ E+RR K E+ ++ + AE ++L+ + K+ R+
Sbjct: 124 KHLEAKKRRIESMDEEKRR----KIEESDKWHRVLLQAEGKKLKDNEQLLKKSIRRKEKE 179
Query: 345 KKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREK 485
KKK++ A + R KK R++++ ++RR K+G +K
Sbjct: 180 KKKSSDAWKERKDNEKKAMLMRQQRREENLKKRRESKKSKKGKAPKK 226
Score = 27.9 bits (59), Expect = 3.9
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 5/196 (2%)
Frame = +3
Query: 270 RRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTAT-----A 434
+RRK+ A A + KKE +++ K A + ++ N K T T
Sbjct: 38 QRRKEKAKARAEAKKLAKKESKAKQESKVAAYDTGNSSDNIADEENDNHKSTITYGTLIV 97
Query: 435 EERRPQPSKKEGAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLEKKKQACR 614
+ + K + AG+++ T G L+ + + S+ E +R+KI +K +
Sbjct: 98 GDDKFSNGKLKVAGKKRGPTDVFGALKHLEAKK--RRIESMDEEKRRKIEESDKWHRVLL 155
Query: 615 EERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRKXTTSLRKKELEEEDY*ACGRSWKK 794
+ G ++ + RR K+K K + A ++ + +K L + + KK
Sbjct: 156 QAEGKKLKDNEQLLKKSIRRKEKEK--KKSSDAWKERKDNEKKAMLMRQQ--RREENLKK 211
Query: 795 KTASPRLKXLQPPKKE 842
+ S + K + PKK+
Sbjct: 212 RRESKKSKKGKAPKKK 227
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 3.0
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 323 ERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRR 502
E +++ PK E K +AEE Q P KE + +A+ E S KR++ N ++
Sbjct: 422 EEKVETPKPE-AQPVSKPKESAEE---QKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQK 477
Query: 503 RKTATADER 529
+T T +R
Sbjct: 478 EETVTQPKR 486
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 167 KTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRL 334
K AI E R KE R +R + +RR+Q + E+ +R+ + A A +
Sbjct: 817 KRAIEERTRAAREAKE-REQREMAEKLERQRRIQQERDEEISRKLAEKAAARRANI 871
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/87 (22%), Positives = 32/87 (36%)
Frame = +3
Query: 210 KKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPP 389
+K AI E R KE +R + +RR+Q + E+ +R+ + A A +
Sbjct: 816 QKRAIEERTRAAREAKER-EQREMAEKLERQRRIQQERDEEISRKLAEKAAARRANIGAS 874
Query: 390 KKEDRNRRRKKTATAEERRPQPSKKEG 470
RR + R P G
Sbjct: 875 SPSPGAWRRGGASAGGVSRDSPRYSRG 901
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 161 RMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCN 292
R++ A E+RRLQ+ + +RN +R + + L++ + E+ N
Sbjct: 213 RLRKAEREKRRLQNERNRERNAQRVSASKLDLAILEAAEVEEIN 256
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.9 bits (59), Expect = 3.9
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Frame = +3
Query: 150 AIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKE-DCNRRRKKTAIAEERRLQSPKK 326
A A+E ++ ++ED + +K + ++ SPK D +E +S +K
Sbjct: 91 AFADEQSVEEEEEEDSEKPVRKNKKSSKKA--SPKNAFDALADDMDDLSLDEEESESSEK 148
Query: 327 EDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEE 503
++K K+ L E + +KK ++E P KK+ R+K A +
Sbjct: 149 SKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKENDDAP-KKDRKTRKKEEKARK 206
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 290 CSLLSSAIAVFFLRRLQSSFFGDCGLLSSAIAVFFLRR 177
CSLLS AI+V + SS G LS + +FF R
Sbjct: 177 CSLLSFAISVLGRNKAPSSLPFALGNLSEKVTIFFTLR 214
>SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +2
Query: 215 DRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEER-RLQPPKKEDCNRRRKKTATAE 391
D ++ + + ++++ ++ + RK+ R R+ P + R+R +
Sbjct: 2 DSPSHSREARVEKLKKIREQMRKSSHENRKEVVQEHSRMRIDPALERRLERKRMEAEEEL 61
Query: 392 ERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKT 511
+ + D RRR TIEE W + R++++T
Sbjct: 62 AKIETEEEGGDFERRRAWDWTIEESEKWDQR--LRKKKQT 99
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 297 EERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRR 416
+ER+ ++ KKE +KK+ + PP++ + R+R
Sbjct: 287 KERKKRAEKKEQQKEKKKEKEKERMKAFIPPEESSKKRKR 326
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/73 (20%), Positives = 29/73 (39%)
Frame = +2
Query: 359 NRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLM 538
++ K + +P K + +R K ++ + K+ED R R + + + +
Sbjct: 591 SKHESKHKRDSKHEARPESKHESHRESKSAEKDKKDKKDKKEDSKRSRSHSVSKPDSSKL 650
Query: 539 MILVKSTGASKKE 577
TGA K E
Sbjct: 651 RTWTDRTGAFKVE 663
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.5 bits (58), Expect = 5.2
Identities = 27/89 (30%), Positives = 40/89 (44%)
Frame = +3
Query: 225 AEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDR 404
AE+ +K+D ++KK A +E+ + K KK AE+R+ +K +R
Sbjct: 8 AEKAEAAKSRKQD-EEKKKKDAEEDEKWSKGVKTN------KKEQEAEKRKAALERKAER 60
Query: 405 NRRRKKTATAEERRPQPSKKEGAGREKTA 491
R K EE PS K G G +K A
Sbjct: 61 ERLEK-----EEMESLPS-KGGKGSKKAA 83
>SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein
Usp102|Schizosaccharomyces pombe|chr 2|||Manual
Length = 249
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +3
Query: 378 LQPPKKEDRNRRR--KKTATAEERRPQPSKKE-----GAGREKTATAEEGRLQP 518
++ KK+ +NRR K+T+ + P+P+ K+ G E+ +T E L P
Sbjct: 119 IETRKKDRKNRREMLKRTSALQPAAPKPTHKKPVPKRNVGAERKSTINEDLLPP 172
>SPBC11C11.10 ||SPBC3B8.13c|pseudouridine
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 386 AEERRPQPPKKEDCNRRRKKT 448
A+ RP PP D NRRR+K+
Sbjct: 80 AQYFRPAPPHPNDRNRRRRKS 100
>SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr
3|||Manual
Length = 542
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 431 RRRKKTATIEERRSWKREDCNRRR 502
RRR++T IE R+ + E+ N+RR
Sbjct: 28 RRRRETQQIEIRKQKREENLNKRR 51
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,021,386
Number of Sequences: 5004
Number of extensions: 67698
Number of successful extensions: 586
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 862245690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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