Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_G02_e15_14.seq
(1535 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 57 3e-08
At3g28770.1 68416.m03591 expressed protein 55 1e-07
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 50 5e-06
At1g56660.1 68414.m06516 expressed protein 48 2e-05
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 46 5e-05
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 45 1e-04
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 45 1e-04
At5g55820.1 68418.m06956 expressed protein 44 2e-04
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 44 3e-04
At5g54410.1 68418.m06777 hypothetical protein 42 0.001
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 42 0.001
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 42 0.001
At1g13650.2 68414.m01605 expressed protein 41 0.002
At1g13650.1 68414.m01604 expressed protein 41 0.002
At5g60030.1 68418.m07527 expressed protein 40 0.004
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 40 0.006
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 39 0.008
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 38 0.018
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 38 0.018
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 38 0.023
At2g33435.1 68415.m04098 RNA recognition motif (RRM)-containing ... 37 0.031
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 37 0.031
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 37 0.031
At4g02720.1 68417.m00368 expressed protein temporary automated f... 37 0.041
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 36 0.054
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 36 0.054
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 36 0.054
At5g53800.1 68418.m06685 expressed protein 36 0.071
At5g10800.1 68418.m01255 RNA recognition motif (RRM)-containing ... 36 0.071
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 36 0.071
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 36 0.071
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 36 0.071
At5g36650.1 68418.m04383 hypothetical protein 36 0.094
At4g36860.2 68417.m05227 LIM domain-containing protein low simil... 36 0.094
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 36 0.094
At2g13320.1 68415.m01468 expressed protein anf genefinder 36 0.094
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 35 0.12
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 35 0.12
At3g48710.1 68416.m05319 expressed protein putative protein - Ar... 35 0.12
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 35 0.12
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 35 0.16
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 35 0.16
At3g51650.1 68416.m05664 expressed protein 35 0.16
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 35 0.16
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 34 0.22
At4g35940.1 68417.m05113 expressed protein 34 0.22
At2g28600.1 68415.m03476 expressed protein 34 0.22
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 34 0.22
At5g13340.1 68418.m01535 expressed protein 34 0.29
At3g51640.1 68416.m05663 expressed protein 34 0.29
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 33 0.38
At3g52220.1 68416.m05737 expressed protein 33 0.38
At3g01690.1 68416.m00101 expressed protein 33 0.38
At3g48120.1 68416.m05248 expressed protein 33 0.50
At2g01100.3 68415.m00018 expressed protein 33 0.50
At2g01100.2 68415.m00017 expressed protein 33 0.50
At2g01100.1 68415.m00016 expressed protein 33 0.50
At1g01490.1 68414.m00065 heavy-metal-associated domain-containin... 33 0.50
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 33 0.66
At2g31410.1 68415.m03838 expressed protein 33 0.66
At5g14280.1 68418.m01670 DNA-binding storekeeper protein-related... 32 0.87
At4g00238.1 68417.m00030 DNA-binding storekeeper protein-related... 32 0.87
At2g44200.1 68415.m05500 expressed protein 32 0.87
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 32 0.87
At1g79200.1 68414.m09234 expressed protein 32 0.87
At1g56110.1 68414.m06443 nucleolar protein Nop56, putative simil... 32 0.87
At5g51840.1 68418.m06427 expressed protein 32 1.2
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 32 1.2
At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-relat... 32 1.2
At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing ... 32 1.2
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 32 1.2
At4g26630.1 68417.m03837 expressed protein 32 1.2
At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative si... 32 1.2
At2g39320.1 68415.m04827 OTU-like cysteine protease family prote... 32 1.2
At2g22795.1 68415.m02704 expressed protein 32 1.2
At5g63550.1 68418.m07976 expressed protein 31 1.5
At5g52230.1 68418.m06483 expressed protein 31 1.5
At5g41020.1 68418.m04986 myb family transcription factor contain... 31 1.5
At5g23890.1 68418.m02806 expressed protein weak similarity to SP... 31 1.5
At4g40020.1 68417.m05666 hypothetical protein 31 1.5
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 31 1.5
At2g24440.1 68415.m02921 expressed protein 31 1.5
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 31 2.0
At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3 d... 31 2.0
At5g53930.1 68418.m06710 expressed protein 31 2.7
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 31 2.7
At4g31880.1 68417.m04531 expressed protein 31 2.7
At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)... 31 2.7
At4g13540.1 68417.m02111 expressed protein 31 2.7
At3g12860.1 68416.m01603 nucleolar protein Nop56, putative simil... 31 2.7
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 31 2.7
At2g45590.1 68415.m05669 protein kinase family protein contains ... 31 2.7
At2g25120.1 68415.m03005 bromo-adjacent homology (BAH) domain-co... 31 2.7
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 31 2.7
At1g24706.1 68414.m03104 expressed protein 31 2.7
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 31 2.7
At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /... 31 2.7
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 30 3.5
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 30 3.5
At4g16680.1 68417.m02519 RNA helicase, putative similar to SP|Q1... 30 3.5
At3g18990.1 68416.m02410 transcriptional factor B3 family protei... 30 3.5
At2g35880.1 68415.m04405 expressed protein 30 3.5
At2g35670.1 68415.m04375 transcription factor, putative / fertil... 30 3.5
At1g15200.1 68414.m01817 protein-protein interaction regulator f... 30 3.5
At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RS... 30 4.7
At5g52040.1 68418.m06458 arginine/serine-rich splicing factor RS... 30 4.7
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 30 4.7
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 30 4.7
At5g19300.1 68418.m02300 expressed protein contains Pfam profile... 30 4.7
At5g14460.1 68418.m01692 pseudouridylate synthase TruB family pr... 30 4.7
At4g24170.1 68417.m03468 kinesin motor family protein contains P... 30 4.7
At4g10790.1 68417.m01759 UBX domain-containing protein low simil... 30 4.7
At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing ... 30 4.7
At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing ... 30 4.7
At2g28620.1 68415.m03479 kinesin motor protein-related 30 4.7
At1g11950.1 68414.m01381 transcription factor jumonji (jmjC) dom... 30 4.7
At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi... 29 6.2
At5g59460.1 68418.m07452 scarecrow-like transcription factor 11 ... 29 6.2
At5g57710.1 68418.m07214 heat shock protein-related contains sim... 29 6.2
At5g42540.1 68418.m05178 5'-3' exoribonuclease (XRN2) identical ... 29 6.2
At3g58050.1 68416.m06471 expressed protein 29 6.2
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 29 6.2
At1g53260.1 68414.m06035 hypothetical protein low similarity to ... 29 6.2
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 29 8.2
At5g54910.1 68418.m06839 DEAD/DEAH box helicase, putative 29 8.2
At5g36740.1 68418.m04402 PHD finger family protein 29 8.2
At5g36670.1 68418.m04388 PHD finger family protein 29 8.2
At5g10250.1 68418.m01190 phototropic-responsive protein, putativ... 29 8.2
At4g36700.1 68417.m05208 cupin family protein low similarity to ... 29 8.2
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 29 8.2
At3g57300.1 68416.m06378 transcriptional activator, putative sim... 29 8.2
At3g25840.1 68416.m03219 protein kinase family protein contains ... 29 8.2
At3g23930.1 68416.m03006 expressed protein 29 8.2
At2g30960.1 68415.m03776 expressed protein 29 8.2
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 29 8.2
At1g50750.1 68414.m05707 expressed protein 29 8.2
At1g04850.1 68414.m00481 ubiquitin-associated (UBA)/TS-N domain-... 29 8.2
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 57.2 bits (132), Expect = 3e-08
Identities = 36/174 (20%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTA-IAEERRLQSPKKEDRNRRRKKTAIAEERRL 265
++E+ R +K ++ K+E RR + A EE + K+E+ R+++ E
Sbjct: 439 EEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEE 498
Query: 266 QSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKK--EDCNRRR 439
++E+ +R ++ A +R + K+E+ ++R++ +ER K+ E +RR
Sbjct: 499 AKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRR 558
Query: 440 KKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKK 601
++ A E + E+ +RR + ER + ++ K+E+ ++++++
Sbjct: 559 EEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRRE 612
Score = 55.6 bits (128), Expect = 8e-08
Identities = 37/148 (25%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Frame = +2
Query: 71 RXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIA 250
R + K+E+ + ++ Q ++E R+R + + R ++ K+E+ +R ++ A
Sbjct: 519 REEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKR 578
Query: 251 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCN 430
E+ Q ++E+ R+ ++ E +R + K R+KK ER+ ++E+
Sbjct: 579 REQERQRKEREEVERKIREEQ--ERKREEEMAKRREQERQKKEREEMERK---KREEEAR 633
Query: 431 RRRKKTATI--EERRSWKREDCNRRRRK 508
+R ++ A I EER+ +RED R+RR+
Sbjct: 634 KREEEMAKIREEERQRKEREDVERKRRE 661
Score = 54.0 bits (124), Expect = 3e-07
Identities = 34/171 (19%), Positives = 81/171 (47%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 268
++E+ R ++ + K+E R+ + E ++E+R +R ++ A +R +
Sbjct: 463 EEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEE 522
Query: 269 SPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKT 448
K+E+ ++R++ +ER K+ + R+++ A +R + ++E+ +RR+
Sbjct: 523 REKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRRE-- 580
Query: 449 ATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKK 601
+ER+ +RE+ R+ R+ M + K+ + + RKK+
Sbjct: 581 ---QERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKR 628
Score = 51.6 bits (118), Expect = 1e-06
Identities = 44/195 (22%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
++E+ +R ++ A +R + K+E+ ++R++ +ER K+ + RK++
Sbjct: 502 REEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEE 561
Query: 363 AEERRLQPPKKEDRNRRRKKTATAEERRPQPSK-KEGAGREKTATAEEGRLQPPMKED** 539
A +R + ++E+ +RR++ +ER K +E R++ + R Q K++
Sbjct: 562 ARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKERE 621
Query: 540 *FL*SLRERR-RKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAG 716
RE RK+ + K ++ R+ + +K ++ RR ++K E A
Sbjct: 622 EMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREEERKR---EEEAA 678
Query: 717 RKXTTSLRKKELEEE 761
++ RKKE EEE
Sbjct: 679 KRAEEERRKKEEEEE 693
Score = 50.0 bits (114), Expect = 4e-06
Identities = 44/203 (21%), Positives = 92/203 (45%)
Frame = +3
Query: 150 AIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKE 329
A E +L +E R+R++ E RR K+E+ R+R++ EE + ++E
Sbjct: 418 ASCAEGELSKLMREIEERKRREEEEIERRR----KEEEEARKREEAKRREEEEAKRREEE 473
Query: 330 DCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGR 509
+ R+K++ A +R + ++E+ +RR++ E + ++K REK + R
Sbjct: 474 ETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKR 533
Query: 510 LQPPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKK 689
+ +++ RE +K E++++ REE +++ ++ +R +++
Sbjct: 534 EEERQRKE--------REEVERKRR--EEQERKRREEEARKREEERKREEEMAKRREQER 583
Query: 690 TIKSAEGAGRKXTTSLRKKELEE 758
K E RK +K EE
Sbjct: 584 QRKEREEVERKIREEQERKREEE 606
Score = 49.6 bits (113), Expect = 5e-06
Identities = 34/173 (19%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 268
K+E+ ++ + ++E + R + E+ + K+E+ +R+++ + +RR +
Sbjct: 493 KREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREE 552
Query: 269 SPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEE--RRPQPPKKEDCNRRRK 442
+K RK+ +R + K+ + R+RK+ E R Q K+E+ +R+
Sbjct: 553 QERKRREEEARKREE-ERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRR 611
Query: 443 KTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKK 601
+ +ER+ +RE+ R++R+ M + + K+ + + RK++
Sbjct: 612 E----QERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRR 660
Score = 49.6 bits (113), Expect = 5e-06
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEER 259
Q ++E+ R ++ + ++E R+R + EE + ++++R R+ ++ + R
Sbjct: 538 QRKEREEVERKRREEQERKRREEEARKREEERKREEE-MAKRREQERQRKEREEVERKIR 596
Query: 260 RLQSPKK-EDCNRRRKKTAIAEERRLQPPKK--EDCNRRRKKTATAEERRPQPPKKEDCN 430
Q K+ E+ +RR++ +ER KK E+ +R ++ A E Q ++ED
Sbjct: 597 EEQERKREEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVE 656
Query: 431 RRRKKTATIEERRSWKRED-----CNRRRRKTATADER 529
R+R++ + KRE+ RRK +E+
Sbjct: 657 RKRREEEAMRREEERKREEEAAKRAEEERRKKEEEEEK 694
Score = 49.2 bits (112), Expect = 7e-06
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Frame = +2
Query: 95 EDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSP 274
E+ R ++ ++ +KE R+ + A E ++E+ R+K+ +R +
Sbjct: 433 EERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEER 492
Query: 275 KK--EDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKT 448
K+ E+ RR ++ EE Q K+E+ + ++ A E Q ++E+ R+R++
Sbjct: 493 KREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREE 552
Query: 449 ATIEERRSWKREDCNRRRRKTATADER 529
+ R R+ R+R+ A R
Sbjct: 553 QERKRREEEARKREEERKREEEMAKRR 579
Score = 47.2 bits (107), Expect = 3e-05
Identities = 30/147 (20%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Frame = +2
Query: 71 RXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKT-AI 247
R Q K+ + K+ + ++E RR + E ++ +E++ R+R++ A
Sbjct: 550 REEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAK 609
Query: 248 AEERRLQSPKKEDCNRR-RKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED 424
E+ Q ++E+ R+ R++ A E + ++E+ R+ ++ + R + ++E+
Sbjct: 610 RREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREE 669
Query: 425 CNRRRKKTATIEERRSWKREDCNRRRR 505
+R ++ A E K+E+ +RR
Sbjct: 670 ERKREEEAAKRAEEERRKKEEEEEKRR 696
Score = 46.8 bits (106), Expect = 4e-05
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Frame = +2
Query: 68 ARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAI 247
AR + +K + K+ + +KE R ++ I EE+ + ++E+ +RR++
Sbjct: 562 ARKREEERKREEEMAKRREQERQRKE---REEVERKIREEQ--ERKREEEMAKRREQERQ 616
Query: 248 AEERRLQSPKK--EDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATA---EERRPQPP 412
+ER KK E+ +R ++ A E Q ++ED R+R++ EER+ +
Sbjct: 617 KKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEE 676
Query: 413 KKEDCNRRRKKTATIEERRSW 475
+ R+K EE+R W
Sbjct: 677 AAKRAEEERRKKEEEEEKRRW 697
Score = 46.4 bits (105), Expect = 5e-05
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Frame = +2
Query: 98 DCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPK 277
+C + L +E R+R + E RR K+E+ R+R++ EE + +
Sbjct: 416 ECASCAEGELSKLMREIEERKRREEEEIERRR----KEEEEARKREEAKRREEEEAKRRE 471
Query: 278 KEDCNRRRKKTAIA----EERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
+E+ R++++ A EER+ + +E+ RR ++ EE Q K+E+ + ++
Sbjct: 472 EEETERKKREEEEARKREEERKRE---EEEAKRREEERKKREEEAEQARKREEEREKEEE 528
Query: 446 TA--TIEERRSWKREDCNRRRRK 508
A EER+ +RE+ R+RR+
Sbjct: 529 MAKKREEERQRKEREEVERKRRE 551
Score = 44.4 bits (100), Expect = 2e-04
Identities = 34/177 (19%), Positives = 73/177 (41%)
Frame = +2
Query: 71 RXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIA 250
R + K+ + R K+ ++ R + +A++R + +KE RK+
Sbjct: 494 REEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQ 553
Query: 251 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCN 430
E +R + ++ R+++ +A+ R + +KE RK E +R + K
Sbjct: 554 ERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQ 613
Query: 431 RRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKK 601
R+KK ER+ + E+ +R + A E + ++E+ R+++
Sbjct: 614 ERQKKEREEMERKK-REEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREE 669
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAE-- 253
Q ++E+ R + + ++E +RR + +ER KK + R+++ +A+
Sbjct: 584 QRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIR 643
Query: 254 ERRLQSPKKEDCNRRRKKTAIA---EERRLQPPKKEDCNRRRKKTATAEERRPQPPK 415
E Q ++ED R+R++ EER+ + + R+K EE+R PP+
Sbjct: 644 EEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEEEEKRRWPPQ 700
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/129 (19%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Frame = +2
Query: 146 NCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERR-LQSPKKEDCNRRRKKTAIAE 322
+C + + E + ++E+ RRRK+ A +R + ++E+ RR ++ +
Sbjct: 419 SCAEGELSKLMREIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERK 478
Query: 323 ERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRR 502
+R + +K + R+R++ + ++E+ + RK+ E+ ++ R+
Sbjct: 479 KREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQ 538
Query: 503 RKTATADER 529
RK ER
Sbjct: 539 RKEREEVER 547
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKK--EDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKT 356
++E+ +RR++ +ER KK E+ +R ++ A E Q ++ED R++++
Sbjct: 603 REEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREE 662
Query: 357 ATA---EERRLQPPKKEDRNRRRKKTATAEERR---PQPSKKE 467
EER+ + + R+K EE+R PQP E
Sbjct: 663 EAMRREEERKREEEAAKRAEEERRKKEEEEEKRRWPPQPKPPE 705
Score = 39.1 bits (87), Expect = 0.008
Identities = 31/149 (20%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Frame = +2
Query: 173 AIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSP---KKEDCNRRRKKTAIAEERRLQPP 343
A E L +E R+R++ E RR + K+E+ RR ++ A E
Sbjct: 418 ASCAEGELSKLMREIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETER 477
Query: 344 KKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKR---EDCNRRRRKTA 514
KK + RK+ + + ++E+ ++R++ A +R +R E+ ++R +
Sbjct: 478 KKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEER 537
Query: 515 TADERGLMMILVKSTGASKKEDHLSRKKK 601
ER + + K+ + +RK++
Sbjct: 538 QRKEREEVERKRREEQERKRREEEARKRE 566
Score = 38.3 bits (85), Expect = 0.013
Identities = 33/143 (23%), Positives = 68/143 (47%)
Frame = +3
Query: 174 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKK 353
++ K+E+ +R ++ A E+ Q ++E+ R+ I EE+ + ++E RR+++
Sbjct: 561 EARKREEERKREEEMAKRREQERQRKEREEVERK-----IREEQE-RKREEEMAKRREQE 614
Query: 354 TATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED 533
E ++ K+E+ R+R++ A+ R + +KE E+ EE + ++
Sbjct: 615 RQKKEREEMERKKREEEARKREE-EMAKIREEERQRKEREDVERKRREEEAMRREEERKR 673
Query: 534 ***FL*SLRERRRKKITYLEKKK 602
E RRKK EK++
Sbjct: 674 EEEAAKRAEEERRKKEEEEEKRR 696
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 55.2 bits (127), Expect = 1e-07
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNR--RRKKTAIAE 253
Q K++ + + L+ K+N ++ + + ++ R KKE + + K+ A E
Sbjct: 974 QEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNRE----KKEYEEKKSKTKEEAKKE 1029
Query: 254 ERRLQSPKKE--DCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDC 427
+++ Q K+E D R+ K E R L+ KKE+ + +K++ + ++ + K+ +
Sbjct: 1030 KKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHED 1089
Query: 428 NRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKKTS 607
N+ KK E+++ K+ + ++ R+K +++ M L KKED +KK
Sbjct: 1090 NKSMKKE---EDKKEKKKHEESKSRKK---EEDKKDMEKLEDQNSNKKKEDKNEKKKSQH 1143
Query: 608 V 610
V
Sbjct: 1144 V 1144
Score = 54.8 bits (126), Expect = 1e-07
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEER 259
+ K +D R +K + K+ R A +E + K+ + ++ +KK E
Sbjct: 1029 EKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHE 1088
Query: 260 RLQSPKKEDCNRRRKKTAIAEERRLQPPKK-----EDCNRRRKKTATAEERRPQPPK--K 418
+S KKE+ + +KK ++ R+ + KK ED N +KK E+++ Q K K
Sbjct: 1089 DNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVK 1148
Query: 419 EDCNRRRKK-------TATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKE 577
++ +++ KK T IE +S K E +++ +K++ ++ + +S K+
Sbjct: 1149 KESDKKEKKENEEKSETKEIESSKSQKNE-VDKKEKKSSKDQQKKKEKEMKESEEKKLKK 1207
Query: 578 DHLSRKKKTSV 610
+ RKK+TSV
Sbjct: 1208 NEEDRKKQTSV 1218
Score = 47.6 bits (108), Expect = 2e-05
Identities = 38/162 (23%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Frame = +2
Query: 137 KKENCNRRRMKT---AIAEERRLQSPKKEDRN--RRRKKTAIAEERRLQSPKKEDCNRRR 301
+K+ ++ KT A E+++ Q K+E+++ R+ K E R L++ KKE+ + +
Sbjct: 1011 EKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEK 1070
Query: 302 KKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKR 481
K++ + ++ + K+ + N+ KK +E+ KK + ++ RKK +++ K
Sbjct: 1071 KESENHKSKKKEDKKEHEDNKSMKKEEDKKEK-----KKHEESKSRKKEE--DKKDMEKL 1123
Query: 482 EDCNRRRRKTATADERGLMMI-LVKSTGASKKEDHLSRKKKT 604
ED N ++K +++ + LVK K++ K +T
Sbjct: 1124 EDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSET 1165
Score = 46.4 bits (105), Expect = 5e-05
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Frame = +2
Query: 95 EDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSP 274
ED MKK + KKE K+ EE + K ED+N +KK E+++ Q
Sbjct: 1088 EDNKSMKK---EEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHV 1144
Query: 275 K--KEDCNRRRKKT--AIAEERRLQPPK--KEDCNRRRKKTATAEERRPQPPKKEDCNRR 436
K K++ +++ KK +E + ++ K K + +++ KK++ ++++ + KE ++
Sbjct: 1145 KLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKK 1204
Query: 437 -------RKKTATIEERRSWKREDCNRRRRK 508
RKK ++EE + K + + K
Sbjct: 1205 LKKNEEDRKKQTSVEENKKQKETKKEKNKPK 1235
Score = 45.6 bits (103), Expect = 9e-05
Identities = 25/110 (22%), Positives = 51/110 (46%)
Frame = +3
Query: 171 LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
L++ KKE+ + +K++ + ++ + K+ + N+ KK +E++ K K
Sbjct: 1058 LKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDK 1117
Query: 351 KTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAE 500
K E + KKED+N ++K ++ K++ EK+ T E
Sbjct: 1118 KDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKE 1167
Score = 45.2 bits (102), Expect = 1e-04
Identities = 46/231 (19%), Positives = 103/231 (44%), Gaps = 3/231 (1%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
K +D +++K++ + ++ + KKE N KK E+ + ++ K E+ +++
Sbjct: 940 KGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQ---EDNKKETTKSENSKLKEENKDN 996
Query: 363 AEERRLQPPKKEDRNRRR---KKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED 533
E++ + ++R ++ KK+ T EE + + K + RE+ + E R KE+
Sbjct: 997 KEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEE--RKSKKEKEE 1054
Query: 534 ***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGA 713
L+ +++++ T EKK+ + + + E + + KK+ K E
Sbjct: 1055 ----SRDLKAKKKEEETK-EKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESK 1109
Query: 714 GRKXTTSLRKKELEEEDY*ACGRSWKKKTASPRLKXLQPPKKEDCNXRRKK 866
RK KK++E+ + + + K + + ++ KKE +K+
Sbjct: 1110 SRKKEED--KKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKE 1158
Score = 42.3 bits (95), Expect = 8e-04
Identities = 39/186 (20%), Positives = 76/186 (40%)
Frame = +2
Query: 44 IPRAAGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 223
+ + +G S + + KKE K + + K+ ++ K ++ ++ K+ED
Sbjct: 906 VQKGSGESVKYKKDEKKEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKK-KEED-- 962
Query: 224 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRP 403
KK + E + Q K++ + + + + EE + KKE + K E
Sbjct: 963 ---KKEYVNNELKKQEDNKKETTKS-ENSKLKEENKDNKEKKESEDSASKNREKKEYEEK 1018
Query: 404 QPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDH 583
+ KE+ + +KK+ +++R K D R+ K + R L + KKE
Sbjct: 1019 KSKTKEEAKKEKKKSQ--DKKREEK--DSEERKSKKEKEESRDLKAKKKEEETKEKKESE 1074
Query: 584 LSRKKK 601
+ KK
Sbjct: 1075 NHKSKK 1080
Score = 39.1 bits (87), Expect = 0.008
Identities = 30/141 (21%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSP--KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERR 262
K+ED M+K Q+ KKE+ N ++ + ++ K++ N + +T E +
Sbjct: 1113 KEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSK 1172
Query: 263 LQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRR-------RKKTATAEERRPQPPKKE 421
Q K + +++ KK++ ++++ + KE ++ RKK + EE + Q K+
Sbjct: 1173 SQ---KNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKK 1229
Query: 422 DCNRRRKKTATIEERRSWKRE 484
+ N+ + ++ K+E
Sbjct: 1230 EKNKPKDDKKNTTKQSGGKKE 1250
Score = 34.7 bits (76), Expect = 0.16
Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 10/230 (4%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
KK + +R K++ E R + D + ++ ++ + KE+ ++
Sbjct: 879 KKREEVQRNDKSSTKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGNKEENKDTINTSSK 938
Query: 363 AEERRLQPPKKEDRNRRRKKT-------ATAEERRPQPSKKEGAGREKTATAEEGRLQPP 521
+ + + KKE +N KK E ++ + +KKE E + EE +
Sbjct: 939 QKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKE 998
Query: 522 MKED***FL*SLRERRRKKITYLEKK---KQACREERGLPGSGKKEGFQDCGRRSWKKKT 692
KE + R+K Y EKK K+ ++E+ KK +D R KK+
Sbjct: 999 KKES-----EDSASKNREKKEYEEKKSKTKEEAKKEK-KKSQDKKREEKDSEERKSKKEK 1052
Query: 693 IKSAEGAGRKXTTSLRKKELEEEDY*ACGRSWKKKTASPRLKXLQPPKKE 842
+S + +K ++K+ E E++ + + KK+ + + KKE
Sbjct: 1053 EESRDLKAKKKEEETKEKK-ESENHKSKKKEDKKEHEDNKSMKKEEDKKE 1101
Score = 34.3 bits (75), Expect = 0.22
Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPK--KEDCNRRRKKTAIAEERRLQSPKKEDCNR----- 341
K+ D +++ +E + ++S K K + +++ KK++ ++++ + KE +
Sbjct: 1149 KESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKN 1208
Query: 342 ---RKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGRE 482
RKK+T+ E ++ + KKE + K T ++ + E +E
Sbjct: 1209 EEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTKQSGGKKESMESESKE 1258
Score = 33.5 bits (73), Expect = 0.38
Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAE---ERRLQSPKKEDRNRRRKKTAIA 250
Q KE+ N+ K + K+ + M++ E +++ Q+ + D + + + +
Sbjct: 1335 QKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQ 1394
Query: 251 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCN 430
+ + S + K I + Q + + RKK + E + Q KE+ N
Sbjct: 1395 ADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKN 1454
Query: 431 RRRKKTATIEERRSWKRE 484
+ + E+ K+E
Sbjct: 1455 KPKDDKKNTTEQSGGKKE 1472
Score = 30.3 bits (65), Expect = 3.5
Identities = 23/138 (16%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAE---ERRLQSPKKEDRNRRRKKTAIA 250
Q K++ N+ K + K+ + M++ E +++ Q+ + D + + + +
Sbjct: 1224 QKETKKEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQ 1283
Query: 251 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCN 430
+ + S + K I + Q + + RKK + E + Q KE+ N
Sbjct: 1284 ADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKN 1343
Query: 431 RRRKKTATIEERRSWKRE 484
+ + ++ K+E
Sbjct: 1344 KPKDDKKNTTKQSGGKKE 1361
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 49.6 bits (113), Expect = 5e-06
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +2
Query: 83 SPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRK-KTAIAEER 259
S K+ + +R KK S +++ +R EER + K+ +R RR K + ER
Sbjct: 41 SEKRREKDRRKKRVKSSDSEDDYDRDD-----DEEREKRKEKERERRRRDKDRVKRRSER 95
Query: 260 RLQSPKKEDCNRR--RKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNR 433
R S ++D R K + E+ R + D + RK+ EER+ + ++E
Sbjct: 96 RKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGKDRKRDREREERKDKEREREKDRE 155
Query: 434 RRKKTATIEERRSWKREDCNRRRRKTATADER 529
RR++ EER + ++ RR R+ D R
Sbjct: 156 RRERER--EEREKERVKERERREREDGERDRR 185
Score = 37.9 bits (84), Expect = 0.018
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Frame = +3
Query: 153 IAEE*KLQSPKKE-DCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKE 329
+ EE L+ +++ D + RKK +E+RR ++D ++R K++ +E+ + +
Sbjct: 16 VEEEADLKKSRRDRDRSNERKKDKGSEKRR-----EKDRRKKRVKSSDSED---DYDRDD 67
Query: 330 DCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAE--ERRPQPSKKEGAGREKTATAEE 503
D R K+K E RR + + R+ RRK + + + E + K+ +E+ E
Sbjct: 68 DEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHE 127
Query: 504 GRLQPPMKED***FL*SLRERRRKKITYLEKKKQACREER 623
K D RER +K E++K R ER
Sbjct: 128 RDRGKDRKRD--------REREERKDKEREREKDRERRER 159
Score = 37.1 bits (82), Expect = 0.031
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Frame = +2
Query: 155 RRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRL 334
RR + + R + + RNR R+++ K D RRRK+ +E+
Sbjct: 174 RREREDGERDRREREKERGSRRNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKER 233
Query: 335 Q-----PPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRR 499
+ + ED +R+ E++ + ++E + ++K +E+RR +E +
Sbjct: 234 EKSVGRSSRHEDSPKRKSVEDNGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELK 293
Query: 500 RRKTATADE 526
R+K E
Sbjct: 294 RKKEEAESE 302
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQ-----SPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
K D RRRK+ +E+ + S + ED + +RK E++ + ++E+ +K
Sbjct: 215 KRDLKRRRKEGGERKEKEREKSVGRSSRHED-SPKRKSVEDNGEKKEKKTREEELEDEQK 273
Query: 351 KTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAE 500
K E+R + ++ +R+K+ A +E + + AG+ T E
Sbjct: 274 KLDEEVEKRRRRVQEWQELKRKKEEAESESKGDADGNEPKAGKAWTLEGE 323
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 47.6 bits (108), Expect = 2e-05
Identities = 49/238 (20%), Positives = 103/238 (43%), Gaps = 10/238 (4%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
K + ++ +K +++E+ + N++++K E + + PKKE ++K+++ +
Sbjct: 149 KNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKE--KKQKEESKS 206
Query: 363 AEERRLQPPK---------KEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
E+++++ K KED ++++ T +E + + SKK + + AEE + +
Sbjct: 207 NEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKK 266
Query: 516 PPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTI 695
P ++ E+ KK+ K K+ E+ GKK D + +
Sbjct: 267 PDKEKK---EKDESTEKEDKKL----KGKKGKGEKPEKEDEGKKTKEHDATEQEMDDEAA 319
Query: 696 KSAEGAGRKXTTSLRKKELEEEDY*ACGRSWKKKTASP-RLKXLQPPKKEDCNXRRKK 866
EG +K +KKE ++ C + K K K + KKE + + +K
Sbjct: 320 DHKEGKKKKNKDKAKKKETVIDE--VCEKETKDKDDDEGETKQKKNKKKEKKSEKGEK 375
Score = 44.8 bits (101), Expect = 2e-04
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 9/208 (4%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKK---EDCN 338
K++ +KE + KK EE + KK N++ K + EE+ ++ K+ ED +
Sbjct: 107 KVEEHEKEHKKGKEKKHEELEEEKEGKKKK---NKKEKDESGPEEKNKKADKEKKHEDVS 163
Query: 339 RRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGRE---KTATAEEGR 509
+ K++ + ++ + +K++ KK +E++ + K ++ K E+G
Sbjct: 164 QEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGD 223
Query: 510 LQ---PPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSW 680
L+ K++ ++E+ KK EK + E++ P KKE + +
Sbjct: 224 LEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEK--- 280
Query: 681 KKKTIKSAEGAGRKXTTSLRKKELEEED 764
+ K +K +G G K K+ +E D
Sbjct: 281 EDKKLKGKKGKGEKPEKEDEGKKTKEHD 308
Score = 39.1 bits (87), Expect = 0.008
Identities = 32/156 (20%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPK---------KEDRNRRR 232
++ KKE + + PKKE + K+ E+++++ K KED +++
Sbjct: 176 KNKKKEKDESGTEEKKKKPKKEKKQKEESKS--NEDKKVKGKKEKGEKGDLEKEDEEKKK 233
Query: 233 KKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPK----KEDCNRRRKKTATAEERR 400
+ +E + + KK ++ K + AEE++ +P K K++ + K ++ +
Sbjct: 234 EHDETDQEMKEKDSKKN--KKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGK 291
Query: 401 PQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRK 508
+ P+KED ++ K+ E+ + D ++K
Sbjct: 292 GEKPEKEDEGKKTKEHDATEQEMDDEAADHKEGKKK 327
Score = 38.3 bits (85), Expect = 0.013
Identities = 39/165 (23%), Positives = 69/165 (41%)
Frame = +3
Query: 348 KKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMK 527
+K ++ K+D+ +++ K +E + + K+ G+ + EEG +K
Sbjct: 43 EKVKAKKDEESSGKSKKDKEKKKGKNVDSEVKEDKDDDKKKDGKMVSKKHEEGHGDLEVK 102
Query: 528 ED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTIKSAE 707
E + E ++ EKK + EE+ GKK+ + S ++ K A+
Sbjct: 103 ES----DVKVEEHEKEHKKGKEKKHEELEEEK----EGKKKKNKKEKDESGPEEKNKKAD 154
Query: 708 GAGRKXTTSLRKKELEEEDY*ACGRSWKKKTASPRLKXLQPPKKE 842
+ S K+ELEEED K+K S + + PKKE
Sbjct: 155 KEKKHEDVSQEKEELEEED--GKKNKKKEKDESGTEEKKKKPKKE 197
Score = 37.1 bits (82), Expect = 0.031
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Frame = +3
Query: 237 RLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPK-KEDRNRR 413
+++ +KE + KK EE + KK N+++K + EE+ + K K+ +
Sbjct: 107 KVEEHEKEHKKGKEKKHEELEEEKEGKKKK---NKKEKDESGPEEKNKKADKEKKHEDVS 163
Query: 414 RKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLE 593
++K EE + KK EK + E + + P KE ++++++ E
Sbjct: 164 QEKEELEEEDGKKNKKK-----EKDESGTEEKKKKPKKE----------KKQKEESKSNE 208
Query: 594 KKKQACREERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRKXTTSLRKKELEEEDY*A 773
KK ++E+G G +KE + KK+ ++ + K + +KKE +E +
Sbjct: 209 DKKVKGKKEKGEKGDLEKEDEEK------KKEHDETDQEMKEKDSKKNKKKEKDE----S 258
Query: 774 CGRSWKKKTASPRLKXLQPPKKEDCNXRRKK 866
C KKK + + + +KED + KK
Sbjct: 259 CAEEKKKKPDKEKKEKDESTEKEDKKLKGKK 289
Score = 36.7 bits (81), Expect = 0.041
Identities = 38/191 (19%), Positives = 76/191 (39%), Gaps = 13/191 (6%)
Frame = +2
Query: 65 SARXLQSPKKEDCNRMKKX*LQSPKKEN--CNRRRMKTAIAEERRLQSPKKEDRNRRRKK 238
S + + K E C KK KKE + K ++ + + P+KED ++ K+
Sbjct: 247 SKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEGKKTKE 306
Query: 239 TAIAEER-------RLQSPKKEDCNRRRKK-TAIAEERRLQPPKKEDCNRRRKKTATAEE 394
E+ + KK++ ++ +KK T I E + K+D K+ ++
Sbjct: 307 HDATEQEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQKKNKKK 366
Query: 395 RRPQPPKKEDCNRRRKKTATIEER---RSWKREDCNRRRRKTATADERGLMMILVKSTGA 565
+ ++D +KK +E R K E+ +++ +E+ + +
Sbjct: 367 EKKSEKGEKDVKEDKKKENPLETEVMSRDIKLEEPEAEKKEEDDTEEKKKSKVEGGESEE 426
Query: 566 SKKEDHLSRKK 598
KK+ +KK
Sbjct: 427 GKKKKKKDKKK 437
Score = 36.7 bits (81), Expect = 0.041
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 9/186 (4%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
KK ++K+T I E ++ K+D K+ ++ + ++D KKK
Sbjct: 327 KKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQKKNKKKEKKSEKGEKDVKEDKKKENP 386
Query: 363 AE------ERRLQPP---KKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
E + +L+ P KKE+ + KK + E + KK+ ++K ++ +
Sbjct: 387 LETEVMSRDIKLEEPEAEKKEEDDTEEKKKSKVEGGESEEGKKK-KKKDKKKNKKKDTKE 445
Query: 516 PPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTI 695
P M ED E ++ ++ + +EE+ KK+G D G+ K I
Sbjct: 446 PKMTED--------EEEKKDDSKDVKIEGSKAKEEKKDKDVKKKKGGNDIGKLKTKLAKI 497
Query: 696 KSAEGA 713
GA
Sbjct: 498 DEKIGA 503
Score = 35.5 bits (78), Expect = 0.094
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 268
K ED ++ K+ + K+N +++ K E + + PKKE + + K+ E+++++
Sbjct: 158 KHEDVSQEKEELEEEDGKKN--KKKEKDESGTEEKKKKPKKEKKQKEESKSN--EDKKVK 213
Query: 269 SPK---------KEDCNRRRKKTAIAEERRLQPPKK-------EDCNRRRKKTATAEER- 397
K KED ++++ +E + + KK E C +KK E++
Sbjct: 214 GKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKE 273
Query: 398 RPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKE 577
+ + +KED + KK + + K ++ + + AT E K G KK
Sbjct: 274 KDESTEKEDKKLKGKKG---KGEKPEKEDEGKKTKEHDATEQEMDDEAADHKE-GKKKKN 329
Query: 578 DHLSRKKKTSV 610
++KK+T +
Sbjct: 330 KDKAKKKETVI 340
Score = 33.5 bits (73), Expect = 0.38
Identities = 36/211 (17%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRK--KTAIAEERRLQSPKKEDCNRRRKKT 310
K + ++ + +++E+ + ++ED + +K K E + + PKKE ++++++
Sbjct: 149 KNKKADKEKKHEDVSQEK--EELEEEDGKKNKKKEKDESGTEEKKKKPKKE--KKQKEES 204
Query: 311 AIAEERRLQPPK---------KEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEE 463
E+++++ K KED ++++ T +E + + KK N++++K + E
Sbjct: 205 KSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKK---NKKKEKDESCAE 261
Query: 464 RRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKKTSVPXXXXXXXXXX 643
+ K + + + ++ +++ L K K+++ K+ +
Sbjct: 262 EKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEGKKTKEHDATEQEMDDEAADH 321
Query: 644 XXGFSRL---RAKELEEKDYQVCRRSWKKXD 727
G + +AK+ E +VC + K D
Sbjct: 322 KEGKKKKNKDKAKKKETVIDEVCEKETKDKD 352
Score = 33.5 bits (73), Expect = 0.38
Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 1/198 (0%)
Frame = +3
Query: 159 EE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCN 338
EE K KK + + + E+ + K+ D + K +++ + + K E C
Sbjct: 202 EESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNK-KKEKDESCA 260
Query: 339 RRKKKTATAEERRL-QPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
KKK E++ + +KED+ + KK + +P K++ + K A E +
Sbjct: 261 EEKKKKPDKEKKEKDESTEKEDKKLKGKK-----GKGEKPEKEDEGKKTKEHDATEQEMD 315
Query: 516 PPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTI 695
+ +E ++KK KKK+ +E + K+ + ++ KK
Sbjct: 316 DEAADH--------KEGKKKKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQKKNKKKE 367
Query: 696 KSAEGAGRKXTTSLRKKE 749
K +E G K +KKE
Sbjct: 368 KKSE-KGEKDVKEDKKKE 384
Score = 31.5 bits (68), Expect = 1.5
Identities = 31/160 (19%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE-DCNR-RR 301
+ KK+N ++ + K + +E + K +D + K +++ +S K E D ++
Sbjct: 323 EGKKKKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQKKNKKKEKKSEKGEKDVKEDKK 382
Query: 302 KKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKR 481
K+ + E + K E+ +K+ EE++ + + +KK ++++ K+
Sbjct: 383 KENPLETEVMSRDIKLEEPEAEKKEEDDTEEKKKSKVEGGESEEGKKKKK--KDKKKNKK 440
Query: 482 EDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKK 601
+D + + T +E+ VK G+ KE+ + K
Sbjct: 441 KD-TKEPKMTEDEEEKKDDSKDVKIEGSKAKEEKKDKDVK 479
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 46.4 bits (105), Expect = 5e-05
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAI 316
+KE RR+++ A ER Q+ ++ R R+K +ER+ + K+++ R+RKK
Sbjct: 461 RKEREQRRKLEDA---ERAYQTRLRQWERREREKE---KERQYEKEKEKEKERKRKKEIR 514
Query: 317 AEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED--CNRRRKKTATIEERRSWKREDC 490
EE + +D RR + A E RR Q +KED +R +++ E +RS + ++
Sbjct: 515 YEEE--EEEDDDDSRRRWHRAALDERRRRQLREKEDDLADRLKEEEEVAEAKRSAEEQNL 572
Query: 491 NRRR 502
+++
Sbjct: 573 QQQQ 576
Score = 39.9 bits (89), Expect = 0.004
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Frame = +2
Query: 131 SPKKENCNRRRMKTAIAEERRLQSPKKE-DRNRRRKKTAIAEERRLQSPKKEDCNR---- 295
SP N RR + +E+ + ++E +R R RK+ + R+L+ ++ R
Sbjct: 427 SPDWSKRNDRRSRERGEKEQEMDRYEREAERERSRKERE--QRRKLEDAERAYQTRLRQW 484
Query: 296 RRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERR 469
R++ +ER+ + K+++ R+RKK EE + +D +RRR A ++ERR
Sbjct: 485 ERREREKEKERQYEKEKEKEKERKRKKEIRYEEEEEED---DDDSRRRWHRAALDERR 539
Score = 37.5 bits (83), Expect = 0.023
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Frame = +3
Query: 177 SPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNR----R 344
SP N RR + +E+ + ++E R R + + R+L+ ++ R
Sbjct: 427 SPDWSKRNDRRSRERGEKEQEMDRYERE-AERERSRKEREQRRKLEDAERAYQTRLRQWE 485
Query: 345 KKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPM 524
+++ +ER+ + K++++ R+RKK EE + + A E R Q
Sbjct: 486 RREREKEKERQYEKEKEKEKERKRKKEIRYEEEEEEDDDDSRRRWHRAALDERRRRQLRE 545
Query: 525 KED***FL*SLRERRRKKITYLEKKKQACREERGL 629
KED L +R +++ E K+ A EE+ L
Sbjct: 546 KED------DLADRLKEEEEVAEAKRSA--EEQNL 572
Score = 31.9 bits (69), Expect = 1.2
Identities = 35/146 (23%), Positives = 57/146 (39%)
Frame = +3
Query: 429 TAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLEKKKQA 608
+ E RP S + + R + E G + M + RER RK+ K + A
Sbjct: 417 SGEHNRPDTSSPDWSKRNDRRSRERGEKEQEMDRY---EREAERERSRKEREQRRKLEDA 473
Query: 609 CREERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRKXTTSLRKKELEEEDY*ACGRSW 788
R + ++ + R ++K+ K E RK +R +E EEED R W
Sbjct: 474 ERAYQTRLRQWERREREKEKERQYEKEKEKEKE---RKRKKEIRYEEEEEEDDDDSRRRW 530
Query: 789 KKKTASPRLKXLQPPKKEDCNXRRKK 866
+ R + K++D R K+
Sbjct: 531 HRAALDERRRRQLREKEDDLADRLKE 556
Score = 30.7 bits (66), Expect = 2.7
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
+KE RR+ + A ER Q+ ++ R R+K +ER+ + K+++ R++KK
Sbjct: 461 RKEREQRRKLEDA---ERAYQTRLRQWERREREKE---KERQYEKEKEKEKERKRKKEIR 514
Query: 363 AEERRLQPPKKEDRN--------RRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
EE + R RRR++ E+ K+E E +AEE LQ
Sbjct: 515 YEEEEEEDDDDSRRRWHRAALDERRRRQLREKEDDLADRLKEEEEVAEAKRSAEEQNLQ 573
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 45.2 bits (102), Expect = 1e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 209 KEDRNRRRKKTAIAEER-RLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTAT 385
KE +++++KK A EE + + P K+ N+ KKT E +P KKE ++KK
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNK--KKTEAEPETAEEPAKKE----KKKKRKH 508
Query: 386 AEERRPQPPKKEDCNRRRKKTAT 454
EE P KK++ + ++KK T
Sbjct: 509 EEEETEMPAKKKEKSEKKKKKKT 531
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
K++ +++KK EE + + P K+ N+ KKT E + KKE +RK +
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNK--KKTEAEPETAEEPAKKEKKKKRKHE--- 509
Query: 363 AEERRLQPPKKEDRNRRRKKTAT 431
EE P KK++++ ++KK T
Sbjct: 510 -EEETEMPAKKKEKSEKKKKKKT 531
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +3
Query: 252 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTAT 431
K++ +++KK EE + + P K+ N KKKT E +P KKE + +R+ +
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSN--KKKTEAEPETAEEPAKKEKKKKRKHEEEE 512
Query: 432 AEERRPQPSKKEGAGREKT 488
E + K E ++KT
Sbjct: 513 TEMPAKKKEKSEKKKKKKT 531
Score = 38.3 bits (85), Expect = 0.013
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = +2
Query: 275 KKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTAT 454
K++ +++KK EE + + P K+ N+ KKT E +P KKE +R+ +
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNK--KKTEAEPETAEEPAKKEKKKKRKHEEEE 512
Query: 455 IEERRSWKREDCNRRRRKT 511
E K + ++++KT
Sbjct: 513 TEMPAKKKEKSEKKKKKKT 531
Score = 36.3 bits (80), Expect = 0.054
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAI 316
K++ +++ K EE + + P K+ N+ KKT E + KKE +R+ +
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNK--KKTEAEPETAEEPAKKEKKKKRKHE--- 509
Query: 317 AEERRLQPPKKEDCNRRRKKTAT 385
EE P KK++ + ++KK T
Sbjct: 510 -EEETEMPAKKKEKSEKKKKKKT 531
Score = 36.3 bits (80), Expect = 0.054
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 159 EE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCN 338
EE K + P K+ N+ KKT AE + P K++ ++RK EE + + KKE
Sbjct: 470 EEAKTEEPSKKKSNK--KKTE-AEPETAEEPAKKEKKKKRKHEE--EETEMPAKKKEKSE 524
Query: 339 RRKKK 353
++KKK
Sbjct: 525 KKKKK 529
Score = 34.7 bits (76), Expect = 0.16
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 268
KK+ + ++ + P K+ N+++ + AE + P K+++ ++RK EE +
Sbjct: 462 KKKKADDEEEAKTEEPSKKKSNKKKTE---AEPETAEEPAKKEKKKKRKHEE--EETEMP 516
Query: 269 SPKKEDCNRRRKK 307
+ KKE +++KK
Sbjct: 517 AKKKEKSEKKKKK 529
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +1
Query: 160 KNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNXXXXXXXX 339
K + +++KK EE + + P K+ N +KKT AE + P K++
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSN--KKKTE-AEPETAEEPAKKEKKKKRKHEEE 511
Query: 340 XXXXXLQPPKKEDCNRRRKKTAT 408
P KK++ + ++KK T
Sbjct: 512 ETE---MPAKKKEKSEKKKKKKT 531
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 45.2 bits (102), Expect = 1e-04
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 268
K E+ R+K L+ +KE + + A E R +++ +K ++ R+ K+ E + +
Sbjct: 657 KAENEKRLKAA-LEQEEKERKIKEAREKAENERRAVEAREKAEQERKMKEQQELELQLKE 715
Query: 269 SPKKEDCNRRRKKTAIAE---ERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRR 439
+ +KE+ NRR ++ E ERR++ ++++ N RR K A E+ + + +
Sbjct: 716 AFEKEEENRRMREAFALEQEKERRIKEAREKEENERRIK--EAREKAELEQRLKATLEQE 773
Query: 440 KKTATIEERRSWKREDCNRRRRK 508
+K I+ER+ +RE+ N RR K
Sbjct: 774 EKERQIKERQ--EREE-NERRAK 793
Score = 44.4 bits (100), Expect = 2e-04
Identities = 39/168 (23%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAE---ERRLQSPKKEDCNRR 298
QS K N +RM+ EE R++ + + N RR++ A+ + E+RL++ +++ R
Sbjct: 620 QSETKLNEPLKRME----EETRIKEARLREENDRRERVAVEKAENEKRLKAALEQEEKER 675
Query: 299 RKKTAIA----EERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIE-- 460
+ K A E R ++ +K + R+ K+ E + + +KE+ NRR ++ +E
Sbjct: 676 KIKEAREKAENERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENRRMREAFALEQE 735
Query: 461 -ERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKK 601
ERR + + R+ A E+ + +K+T ++++ ++++
Sbjct: 736 KERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEKERQIKERQ 783
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/131 (21%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Frame = +3
Query: 159 EE*KLQSPKKEDCNRRRKKTAIAE---ERRLQSPKKEDCNRRRKKTAIA----EERRLQS 317
EE +++ + + N RR++ A+ + E+RL++ +++ R+ K A E R +++
Sbjct: 634 EETRIKEARLREENDRRERVAVEKAENEKRLKAALEQEEKERKIKEAREKAENERRAVEA 693
Query: 318 PKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATA 497
+K + R+ K+ E + + +KE+ NRR ++ E+ + + K+ E
Sbjct: 694 REKAEQERKMKEQQELELQLKEAFEKEEENRRMREAFALEQEKERRIKEAREKEENERRI 753
Query: 498 EEGRLQPPMKE 530
+E R + +++
Sbjct: 754 KEAREKAELEQ 764
Score = 36.7 bits (81), Expect = 0.041
Identities = 37/163 (22%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Frame = +2
Query: 152 NRRRMKTAIAE---ERRL-QSPKKEDRNRRRKKTAI----AEERRLQSPKKEDCNRRRKK 307
N R++K A+ + ERRL ++ +KE+ N+++ + AI E+R +++ ++ + RR K+
Sbjct: 801 NERKLKEALEQKENERRLKETREKEE-NKKKLREAIELEEKEKRLIEAFERAEIERRLKE 859
Query: 308 TAIAEE--RRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKR 481
EE RLQ K+ + R + ER+ E+ + + + +E+ +
Sbjct: 860 DLEQEEMRMRLQEAKERERLHRENQEHQENERKQHEYSGEESDEKERDACEMEKTCETTK 919
Query: 482 EDCNRRRRKTATAD--ERGLMMILVKSTGASKKEDHLSRKKKT 604
E + + +D E + S KKE+ +R++++
Sbjct: 920 EAHGEQSSNESLSDTLEENESIDNDVSVNKQKKEEEGTRQRES 962
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 44.4 bits (100), Expect = 2e-04
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Frame = +2
Query: 68 ARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKE-DRNRRRKKTA 244
A L+ K+E N +KK ++ KKE +R++ + +A ++ ++ KKE +R R+ + A
Sbjct: 1545 AMKLERAKQEQEN-LKKQEIEKKKKEE-DRKKKEAEMAWKQEMEKKKKEEERKRKEFEMA 1602
Query: 245 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED 424
+ +R + K+ ++R++ A + ++ + +K + K+ A + Q KED
Sbjct: 1603 DRKRQREEEDKRLKEAKKRQRIADFQRQQREADEKLQAEKELKRQAMDARIKAQKELKED 1662
Query: 425 CNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHL 586
N +KT R R N A+ R ++ + G +E ++
Sbjct: 1663 QN-NAEKTRQANSRIPAVRSKSNSSDDTNASRSSRENDFKVISNPGNMSEEANM 1715
Score = 42.7 bits (96), Expect = 6e-04
Identities = 46/188 (24%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Frame = +2
Query: 53 AAGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRR 232
AA S R + +KE+ ++KK ++ K E R + + +++ ++ KKE+ +R++
Sbjct: 1524 AAEASKRIAE--QKENDRKLKK---EAMKLE---RAKQEQENLKKQEIEKKKKEE-DRKK 1574
Query: 233 KKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPP 412
K+ +A ++ ++ KKE+ R+RK+ +A+ +R + + + +K+ A+ +R Q
Sbjct: 1575 KEAEMAWKQEMEKKKKEE-ERKRKEFEMADRKRQREEEDKRLKEAKKRQRIADFQRQQRE 1633
Query: 413 KKEDCN-----RRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKE 577
E +R+ A I+ ++ K ED N KT A+ R + V+S S +
Sbjct: 1634 ADEKLQAEKELKRQAMDARIKAQKELK-EDQN-NAEKTRQANSR---IPAVRSKSNSSDD 1688
Query: 578 DHLSRKKK 601
+ SR +
Sbjct: 1689 TNASRSSR 1696
Score = 31.9 bits (69), Expect = 1.2
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Frame = +3
Query: 219 AIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSP---KKEDCNR------RKKKTATAEE 371
A +R+ K+ D R+ KK A+ ER Q KK++ + RKKK A
Sbjct: 1524 AAEASKRIAEQKEND--RKLKKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAW 1581
Query: 372 RRLQPPKKEDRNRRRKKTATAEERRPQPSK----KEGAGREKTA 491
++ KK++ R+RK+ A+ +R + + KE R++ A
Sbjct: 1582 KQEMEKKKKEEERKRKEFEMADRKRQREEEDKRLKEAKKRQRIA 1625
Score = 29.9 bits (64), Expect = 4.7
Identities = 35/161 (21%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Frame = +3
Query: 288 AIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 467
A +R+ K+ D R+ KK E +L+ K+E N ++++ E+++ + +K
Sbjct: 1524 AAEASKRIAEQKEND--RKLKK----EAMKLERAKQEQENLKKQEI---EKKKKEEDRK- 1573
Query: 468 GAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKK 647
+++ A + ++ KE+ ER+RK+ ++K+Q E++ L + K+
Sbjct: 1574 ---KKEAEMAWKQEMEKKKKEE---------ERKRKEFEMADRKRQREEEDKRLKEAKKR 1621
Query: 648 EGFQDCGRRSWKKKTIKSAEGAGRKXTTSLR---KKELEEE 761
+ D R+ + AE ++ R +KEL+E+
Sbjct: 1622 QRIADFQRQQREADEKLQAEKELKRQAMDARIKAQKELKED 1662
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 44.0 bits (99), Expect = 3e-04
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 65 SARXLQSPKKEDCNRMKKX*LQSPKKEN-CNRRRMKTAIAEERRLQSPKKEDRNRRRKKT 241
SA+ + KK+D + KK + P++E +++ K A AE + KE++ + +KK
Sbjct: 448 SAKSEEPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKR 507
Query: 242 AIAEERRLQSP-KKEDCNRRRKKT 310
EE ++P KK+D ++KK+
Sbjct: 508 KHEEEETTETPAKKKDKKEKKKKS 531
Score = 43.6 bits (98), Expect = 4e-04
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRK 347
K + P K+ +++KK + EE+ ++E +++KK A AE + KE+ + K
Sbjct: 450 KSEEPSKKKDKKKKKK--VEEEK---PEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNK 504
Query: 348 KKTATAEERRLQ-PPKKEDRNRRRKKT 425
KK EE + P KK+D+ ++KK+
Sbjct: 505 KKRKHEEEETTETPAKKKDKKEKKKKS 531
Score = 39.9 bits (89), Expect = 0.004
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +2
Query: 185 ERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNR 364
E +S + + ++KK + EE+ ++E +++KK A AE + KE+ +
Sbjct: 446 ETSAKSEEPSKKKDKKKKKKVEEEK---PEEEEPSEKKKKKKAEAETEAVVEVAKEEKKK 502
Query: 365 RRKKTATAEERRPQ-PPKKEDCNRRRKKT 448
+KK EE + P KK+D ++KK+
Sbjct: 503 NKKKRKHEEEETTETPAKKKDKKEKKKKS 531
Score = 37.5 bits (83), Expect = 0.023
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 131 SPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT 310
S K E ++++ K + + ++E +++KK A AE + KE+ + +KK
Sbjct: 448 SAKSEEPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKR 507
Query: 311 AIAEERRLQ-PPKKEDCNRRRKKT 379
EE + P KK+D ++KK+
Sbjct: 508 KHEEEETTETPAKKKDKKEKKKKS 531
Score = 37.5 bits (83), Expect = 0.023
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 246 SPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKT 425
S K E+ ++++ K + + ++E ++KKK A AE + KE++ + +KK
Sbjct: 448 SAKSEEPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKR 507
Query: 426 ATAEERRPQ-PSKKEGAGREK 485
EE + P+KK+ +K
Sbjct: 508 KHEEEETTETPAKKKDKKEKK 528
Score = 33.1 bits (72), Expect = 0.50
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +2
Query: 266 QSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
+ P K+ +++KK + EE+ P ++E +++KK A AE KE+ + +KK
Sbjct: 452 EEPSKKKDKKKKKK--VEEEK---PEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKK 506
Query: 446 TATIEERRS---WKREDCNRRRRKT 511
EE + K++D +++K+
Sbjct: 507 RKHEEEETTETPAKKKDKKEKKKKS 531
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +2
Query: 404 QPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDH 583
+P KK+D +KK +EE + + E ++++K A A+ ++ + + +KK+
Sbjct: 453 EPSKKKD----KKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRK 508
Query: 584 LSRKKKTSVP 613
++ T P
Sbjct: 509 HEEEETTETP 518
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Frame = +2
Query: 107 RMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTA-IAEERRLQSPKKE 283
++++ LQS ++ N + E++RL++ K++ + K + + ++++ K+
Sbjct: 41 KLREETLQSNEEANDAMETFRRKTNEQKRLENEKRKQALKDAKDLKDLTYKTKVENKLKK 100
Query: 284 DCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERR-PQPPKKEDCNRRRKKTATIE 460
+ K A EE+ L KK+D +K T E+++ P KK+D +KK E
Sbjct: 101 --TQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKKDPTEEKKKDPAEE 158
Query: 461 ERRSWKR 481
E KR
Sbjct: 159 EELEIKR 165
Score = 36.3 bits (80), Expect = 0.054
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +2
Query: 188 RRLQSPKKEDRNRRRKKTAIAEERRLQS-PKKEDCNRRRKKTAIAEERRLQPPKKEDCNR 364
RR + +K N +RK+ A+ + + L+ K + KKT E+ R + +K+
Sbjct: 61 RRKTNEQKRLENEKRKQ-ALKDAKDLKDLTYKTKVENKLKKTQ-PEKDRAEEEEKDLTEE 118
Query: 365 RRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRED 487
++K EE+ P KK++ +KK T E+++ E+
Sbjct: 119 KKKDPTEEEEKDPTEEKKKEPAEEKKKDPTEEKKKDPAEEE 159
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/130 (20%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Frame = +2
Query: 53 AAGXSARXLQSPKKEDCN-RMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRR 229
AA R E+ N M+ ++ +++ + K A+ + + L+ + +
Sbjct: 37 AANKKLREETLQSNEEANDAMETFRRKTNEQKRLENEKRKQALKDAKDLKDLTYKTKVEN 96
Query: 230 RKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQP 409
+ K E+ R + +K+ ++K EE+ KK++ +KK T EE++ P
Sbjct: 97 KLKKTQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKKDPT-EEKKKDP 155
Query: 410 PKKEDCNRRR 439
++E+ +R
Sbjct: 156 AEEEELEIKR 165
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 234 RRLQSPKKEDCNRRRKKTAIAEERRLQS-PKKEDCNRRKKKTATAEERRLQPPKKEDRNR 410
RR + +K N +RK+ A+ + + L+ K + KKT E+ R + +K+
Sbjct: 61 RRKTNEQKRLENEKRKQ-ALKDAKDLKDLTYKTKVENKLKKTQ-PEKDRAEEEEKDLTEE 118
Query: 411 RRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED 533
++K EE+ P KK+ EK E + + P +E+
Sbjct: 119 KKKDPTEEEEKDPTEEKKKEPAEEKKKDPTEEKKKDPAEEE 159
Score = 33.9 bits (74), Expect = 0.29
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 207 RKKTAIAEERRLQS-PKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQ 383
++K A+ + + L+ K + KKT E+ R + +K+ +KK EE+
Sbjct: 74 KRKQALKDAKDLKDLTYKTKVENKLKKTQ-PEKDRAEEEEKDLTEEKKKDPTEEEEKDPT 132
Query: 384 PPKKEDRNRRRKKTATAEERRPQPSKKE 467
KK++ +KK T EE++ P+++E
Sbjct: 133 EEKKKEPAEEKKKDPT-EEKKKDPAEEE 159
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = +2
Query: 152 NRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKK-EDCNRRRKKTAIAEER 328
N++ + + + R + ++ + E+R Q+ K +D KT + +
Sbjct: 39 NKKLREETLQSNEEANDAMETFRRKTNEQKRLENEKRKQALKDAKDLKDLTYKTKVENKL 98
Query: 329 RLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERR 469
+ P+K+ K +++ P +++D +KK E+++
Sbjct: 99 KKTQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKK 145
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 41.9 bits (94), Expect = 0.001
Identities = 39/182 (21%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Frame = +2
Query: 56 AGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPK--KEDRNRR 229
A A ++ KE+ K ++ +K + + + EE + ++ + K++R R+
Sbjct: 705 AKQKAEEIEVTGKEENETDKHGKMKKERKRKKSESKKEGGEGEETQKEANESTKKERKRK 764
Query: 230 R---KKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERR 400
+ KK + EE + P + R++K E ++ +E+ R+ +T +ER+
Sbjct: 765 KSESKKQSDGEEETQKEPSESTKKERKRKN--PESKKKAEAVEEEETRKESVESTKKERK 822
Query: 401 PQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGAS--KK 574
+ PK ++ +T E+++ KRE + ++K + G + + G+S KK
Sbjct: 823 RKKPKHDE-EEVPNETEKPEKKKKKKRE--GKSKKKETETEFSGAELYVTFGPGSSLPKK 879
Query: 575 ED 580
ED
Sbjct: 880 ED 881
Score = 38.7 bits (86), Expect = 0.010
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Frame = +2
Query: 191 RLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRR 370
+++ +K ++ +K+ EE + ++ + R+RKK+ E + Q +E+ +
Sbjct: 727 KMKKERKRKKSESKKEGGEGEETQKEANESTKKERKRKKS----ESKKQSDGEEETQKEP 782
Query: 371 KKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILV 550
++ E +R P K+ ++ E S K+E R+RK DE +
Sbjct: 783 SESTKKERKRKNPESKKKAEAVEEEETRKESVESTKKE----RKRKKPKHDEEEVPNETE 838
Query: 551 K-STGASKKEDHLSRKKKTSVPXXXXXXXXXXXXGFSRLRAKELEE 685
K KK + S+KK+T G S + ++L E
Sbjct: 839 KPEKKKKKKREGKSKKKETETEFSGAELYVTFGPGSSLPKKEDLIE 884
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 41.5 bits (93), Expect = 0.001
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +2
Query: 197 QSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPK----KEDCNR 364
Q+ +KE+ R + E K + +R+ K+ A+ + +R Q K KE
Sbjct: 3 QANEKEEEERHEEAAGEKESFEESKEKAAEMSRKEKRKAMKKLKRKQVRKEIAAKEREEA 62
Query: 365 RRKKTATAEERRPQPPKKEDCNRRRKKTATIEE-RRSWKREDCNRRRRK 508
+ K AE+ R + ++ED RR K+ EE R+W RE +R+K
Sbjct: 63 KAKLNDPAEQERLKAIEEEDARRREKELKDFEESERAW-REAMEIKRKK 110
Score = 30.7 bits (66), Expect = 2.7
Identities = 30/110 (27%), Positives = 49/110 (44%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATA 365
KE + K AE+ RL++ ++ED RR K+ EE + + R+K++ A
Sbjct: 57 KEREEAKAKLNDPAEQERLKAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEA 116
Query: 366 EERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
K+E+ RR K EE R K E +G ++ E+G +
Sbjct: 117 --------KREEEERRWK---DLEELR----KLEASGNDECGEDEDGEYE 151
Score = 29.1 bits (62), Expect = 8.2
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +3
Query: 588 LEKKKQACREERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRKXTTSLRKKELEEEDY 767
+E+ + EER +G+KE F++ K+K + + RK L++K++ +E
Sbjct: 1 MEQANEKEEEERHEEAAGEKESFEES-----KEKAAEMSRKEKRKAMKKLKRKQVRKEIA 55
Query: 768 *ACGRSWKKKTASP-RLKXLQPPKKEDCNXRRKK 866
K K P + L+ ++ED R K+
Sbjct: 56 AKEREEAKAKLNDPAEQERLKAIEEEDARRREKE 89
>At1g13650.2 68414.m01605 expressed protein
Length = 286
Score = 41.1 bits (92), Expect = 0.002
Identities = 32/95 (33%), Positives = 49/95 (51%)
Frame = +2
Query: 161 RMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQP 340
+++ IAEER+++ K E R++K AEE +L+ K E+ R K AEE +L+
Sbjct: 187 QLRMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRK 240
Query: 341 PKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
K E+ R AEER+ + K E R+ K
Sbjct: 241 EKAEETQLR---MVIAEERQLRKEKDEKRQLRKGK 272
Score = 38.7 bits (86), Expect = 0.010
Identities = 30/85 (35%), Positives = 44/85 (51%)
Frame = +3
Query: 213 KTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPK 392
+ IAEER+++ K E R++K AEE +L+ K E+ R K AEE +L+ K
Sbjct: 189 RMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRKEK 242
Query: 393 KEDRNRRRKKTATAEERRPQPSKKE 467
E+ R AEER+ + K E
Sbjct: 243 AEETQLR---MVIAEERQLRKEKDE 264
Score = 37.9 bits (84), Expect = 0.018
Identities = 31/91 (34%), Positives = 46/91 (50%)
Frame = +2
Query: 236 KTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPK 415
+ IAEER+++ K E R++K AEE +L+ K E+ R K AEE + + K
Sbjct: 189 RMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRKEK 242
Query: 416 KEDCNRRRKKTATIEERRSWKREDCNRRRRK 508
E+ R EER+ K +D R+ RK
Sbjct: 243 AEETQLR---MVIAEERQLRKEKDEKRQLRK 270
Score = 35.1 bits (77), Expect = 0.12
Identities = 27/109 (24%), Positives = 52/109 (47%)
Frame = +2
Query: 152 NRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 331
N ++ AEE +L+ E+R R+ K AE+ +L+ K E+ R K AEE +
Sbjct: 174 NSSPVRMGKAEETQLRMVIAEERKVRKDK---AEKTQLRKEKAEESQLREVK---AEETQ 227
Query: 332 LQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWK 478
L+ K E+ R++K + R +++ + +K + ++ W+
Sbjct: 228 LRMVKAEETQLRKEKAEETQLRMVIAEERQLRKEKDEKRQLRKGKKGWR 276
Score = 33.5 bits (73), Expect = 0.38
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +3
Query: 282 KTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSK 461
+ IAEER+++ K E RK+K AEE +L+ K E+ R K AEE + + K
Sbjct: 189 RMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRKEK 242
Query: 462 KEGAGREKTATAEEGRLQPPMKE 530
E + + AEE +L+ E
Sbjct: 243 AEET-QLRMVIAEERQLRKEKDE 264
Score = 31.9 bits (69), Expect = 1.2
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAI 316
+KE +++ AEE +L+ K E+ R++K AEE +L+ E+ R++K
Sbjct: 209 RKEKAEESQLREVKAEETQLRMVKAEETQLRKEK---AEETQLRMVIAEERQLRKEKD-- 263
Query: 317 AEERRLQPPKK 349
E+R+L+ KK
Sbjct: 264 -EKRQLRKGKK 273
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 77 LQSPKKEDCN-RMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKK 238
L+ K E+ RM K +KE +++ IAEER+L+ K E R R+ K
Sbjct: 218 LREVKAEETQLRMVKAEETQLRKEKAEETQLRMVIAEERQLRKEKDEKRQLRKGK 272
>At1g13650.1 68414.m01604 expressed protein
Length = 281
Score = 41.1 bits (92), Expect = 0.002
Identities = 32/95 (33%), Positives = 49/95 (51%)
Frame = +2
Query: 161 RMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQP 340
+++ IAEER+++ K E R++K AEE +L+ K E+ R K AEE +L+
Sbjct: 182 QLRMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRK 235
Query: 341 PKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
K E+ R AEER+ + K E R+ K
Sbjct: 236 EKAEETQLR---MVIAEERQLRKEKDEKRQLRKGK 267
Score = 38.7 bits (86), Expect = 0.010
Identities = 30/85 (35%), Positives = 44/85 (51%)
Frame = +3
Query: 213 KTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPK 392
+ IAEER+++ K E R++K AEE +L+ K E+ R K AEE +L+ K
Sbjct: 184 RMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRKEK 237
Query: 393 KEDRNRRRKKTATAEERRPQPSKKE 467
E+ R AEER+ + K E
Sbjct: 238 AEETQLR---MVIAEERQLRKEKDE 259
Score = 37.9 bits (84), Expect = 0.018
Identities = 31/91 (34%), Positives = 46/91 (50%)
Frame = +2
Query: 236 KTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPK 415
+ IAEER+++ K E R++K AEE +L+ K E+ R K AEE + + K
Sbjct: 184 RMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRKEK 237
Query: 416 KEDCNRRRKKTATIEERRSWKREDCNRRRRK 508
E+ R EER+ K +D R+ RK
Sbjct: 238 AEETQLR---MVIAEERQLRKEKDEKRQLRK 265
Score = 35.1 bits (77), Expect = 0.12
Identities = 27/109 (24%), Positives = 52/109 (47%)
Frame = +2
Query: 152 NRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 331
N ++ AEE +L+ E+R R+ K AE+ +L+ K E+ R K AEE +
Sbjct: 169 NSSPVRMGKAEETQLRMVIAEERKVRKDK---AEKTQLRKEKAEESQLREVK---AEETQ 222
Query: 332 LQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWK 478
L+ K E+ R++K + R +++ + +K + ++ W+
Sbjct: 223 LRMVKAEETQLRKEKAEETQLRMVIAEERQLRKEKDEKRQLRKGKKGWR 271
Score = 33.5 bits (73), Expect = 0.38
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +3
Query: 282 KTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSK 461
+ IAEER+++ K E RK+K AEE +L+ K E+ R K AEE + + K
Sbjct: 184 RMVIAEERKVRKDKAEKTQLRKEK---AEESQLREVKAEETQLRMVK---AEETQLRKEK 237
Query: 462 KEGAGREKTATAEEGRLQPPMKE 530
E + + AEE +L+ E
Sbjct: 238 AEET-QLRMVIAEERQLRKEKDE 259
Score = 31.9 bits (69), Expect = 1.2
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAI 316
+KE +++ AEE +L+ K E+ R++K AEE +L+ E+ R++K
Sbjct: 204 RKEKAEESQLREVKAEETQLRMVKAEETQLRKEK---AEETQLRMVIAEERQLRKEKD-- 258
Query: 317 AEERRLQPPKK 349
E+R+L+ KK
Sbjct: 259 -EKRQLRKGKK 268
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 77 LQSPKKEDCN-RMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKK 238
L+ K E+ RM K +KE +++ IAEER+L+ K E R R+ K
Sbjct: 213 LREVKAEETQLRMVKAEETQLRKEKAEETQLRMVIAEERQLRKEKDEKRQLRKGK 267
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 39.9 bits (89), Expect = 0.004
Identities = 37/175 (21%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAE--ERR 262
++ D +MKK E N + +EERR + +K+ + + + + E + +
Sbjct: 113 RERDEKKMKKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEK 172
Query: 263 LQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRK 442
L+ +K + RKK + +++ +K+A +E++ K ED ++
Sbjct: 173 LEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKN--KDEDVVDEKE 230
Query: 443 KTATIEERRSWKREDCNRRRRKT--ATADERGLMMILVKSTGASKKEDHLSRKKK 601
K +E+RS +R+ +++RK+ E KS E+ S+KK+
Sbjct: 231 KEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSDEEMGSEERKSKKKR 285
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/94 (25%), Positives = 45/94 (47%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
+KE +K I E+++ K ED ++K + +E+R KKE KKK
Sbjct: 201 EKEKLEDEQKSAEIKEKKK---NKDEDVVDEKEKEKLEDEQRSGERKKE-----KKKKRK 252
Query: 363 AEERRLQPPKKEDRNRRRKKTATAEERRPQPSKK 464
++E + +K + R+ + +EER+ + +K
Sbjct: 253 SDEEIVSEERKSKKKRKSDEEMGSEERKSKKKRK 286
Score = 34.3 bits (75), Expect = 0.22
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = +3
Query: 168 KLQSPKKE-DCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRR 344
KL+ +K D R+KK + +KE +K I E+++ K ED
Sbjct: 172 KLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKK---NKDEDVVDE 228
Query: 345 KKKTATAEERRLQPPKKEDRNRRRK--KTATAEERRPQPSKK--EGAGREKTATAEEGRL 512
K+K +E+R KKE + ++RK + +EER+ + +K E G E+ + ++ +L
Sbjct: 229 KEKEKLEDEQRSGERKKE-KKKKRKSDEEIVSEERKSKKKRKSDEEMGSEERKSKKKRKL 287
Query: 513 Q 515
+
Sbjct: 288 K 288
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 39.5 bits (88), Expect = 0.006
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Frame = +2
Query: 131 SPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT 310
S K+ + R+ K +++E S + + RRR + +R + ED R K
Sbjct: 170 SSVKKTSSVRKKKKRVSDESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKR 229
Query: 311 AIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDC 490
+ERR + ++D + + ++RR + +++ RRR + ++ S ED
Sbjct: 230 R--KERRGRKRDEDDSDESEDE----DDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDD 283
Query: 491 NRRRRK---TATADERGLMM---ILVKSTGASKKEDHLSRKK 598
R++R+ A++D + + G+SK+ + SRK+
Sbjct: 284 RRQKRRNKVAASSDSEANVSGDDVSRVGRGSSKRSEKKSRKR 325
Score = 36.7 bits (81), Expect = 0.041
Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRR-----KKTA 244
+S D K+ K+ + RR + + EE +KE R R+R ++
Sbjct: 188 ESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKERRGRKRDEDDSDESE 247
Query: 245 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED 424
++RR++ +++ RRR + +++ + + + +RR K A + + +D
Sbjct: 248 DEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDRRQKRRNKVAASSDSEAN-VSGDD 306
Query: 425 CNRRRKKTATIEERRSWKREDCNRR 499
+R + ++ E++S KR R
Sbjct: 307 VSRVGRGSSKRSEKKSRKRHHRKER 331
Score = 36.3 bits (80), Expect = 0.054
Identities = 23/95 (24%), Positives = 49/95 (51%)
Frame = +3
Query: 231 ERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNR 410
+RR +S KK ++RR + +E +S ++++ RK+ ++E ED +
Sbjct: 199 KRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKERRGRKRDEDDSDE-------SEDEDD 251
Query: 411 RRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
RR K + +E+R + S++ + + ++E+ R Q
Sbjct: 252 RRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDRRQ 286
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 39.1 bits (87), Expect = 0.008
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Frame = +2
Query: 65 SARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTA 244
+A + KK++ ++ KK + + + ++ E LQ KK+ + + +K
Sbjct: 305 TAAAKKKKKKKEKDKEKKAAAAATSSVEAKEEKQEESVTEP--LQPKKKDAKGKAAEKKI 362
Query: 245 IAEERRLQSP--KKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKK--TATAEERRPQPP 412
R +Q ++++ R+KK EE +L +KE+ RRR++ A AEE + +
Sbjct: 363 PKHVREMQEALARRQEAEERKKKE---EEEKL---RKEEEERRRQEELEAQAEEAKRKRK 416
Query: 413 KKEDCNRRRKKTATIEERRSWKREDCNRRRRKT-ATADERGLMMILVKSTGASKKEDHLS 589
+KE RKK K E R K A RGL + S K +
Sbjct: 417 EKEKEKLLRKKLEGKLLTAKQKTEAQKREAFKNQLLAAGRGLPVADDVGDATSSKRPIYA 476
Query: 590 RKKKTS 607
KKK S
Sbjct: 477 NKKKPS 482
Score = 34.3 bits (75), Expect = 0.22
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
KK + R + A+A + + KK++ + +K EERR Q + K+K
Sbjct: 360 KKIPKHVREMQEALARRQEAEERKKKEEEEKLRKEE--EERRRQEELEAQAEEAKRKRKE 417
Query: 363 AEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGR 479
E+ +L K E + K+ A++R ++ AGR
Sbjct: 418 KEKEKLLRKKLEGKLLTAKQKTEAQKREAFKNQLLAAGR 456
Score = 33.5 bits (73), Expect = 0.38
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +3
Query: 249 PKKEDCNRRRKKTAIAEE-RRLQS--PKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRK 419
PKK+D + + I + R +Q ++++ RKKK EE +L+ ++E+R R+ +
Sbjct: 348 PKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERKKK---EEEEKLR-KEEEERRRQEE 403
Query: 420 KTATAEERRPQPSKKE 467
A AEE + + +KE
Sbjct: 404 LEAQAEEAKRKRKEKE 419
Score = 29.9 bits (64), Expect = 4.7
Identities = 21/110 (19%), Positives = 43/110 (39%)
Frame = +3
Query: 201 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRL 380
+++KK +E++ + + +K + LQ KK+ + +K R +
Sbjct: 310 KKKKKKEKDKEKKAAAAATSSVEAKEEKQEESVTEPLQPKKKDAKGKAAEKKIPKHVREM 369
Query: 381 QPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKE 530
Q + +K EE+ + ++ E A AEE + + KE
Sbjct: 370 QEALARRQEAEERKKKEEEEKLRKEEEERRRQEELEAQAEEAKRKRKEKE 419
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 37.9 bits (84), Expect = 0.018
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 77 LQSPKKEDCNRMKKX*LQSPKKENCNRR--RMKTAIAEERRLQSPKKEDRNRRRKKTAIA 250
L+ P K K SPK E + K E + +SPK E + + + ++
Sbjct: 429 LEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTE-QPKPKPESPKQ 487
Query: 251 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKE 421
E + ++PK E + + ++ E + +PPK E+ + + + E +PQPPK+E
Sbjct: 488 ESPKQEAPKPEQ-PKPKPESPKQESSKQEPPKPEE-SPKPEPPKPEESPKPQPPKQE 542
Score = 31.5 bits (68), Expect = 1.5
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Frame = +3
Query: 159 EE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCN 338
E K ++PK E + K + +E Q P K + + + + E + Q PK+E
Sbjct: 488 ESPKQEAPKPEQ--PKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQE--T 543
Query: 339 RRKKKTATAEERRLQPPKKEDRNR---RRKKTATAEER-RPQPSKKEGAGREKTATAEEG 506
+ +++ + + + PK E+ + +++T EE +PQP K+E + +
Sbjct: 544 PKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQEQPPKTEAPKMGSP 603
Query: 507 RLQPPMKED 533
L+ P+ D
Sbjct: 604 PLESPVPND 612
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 37.9 bits (84), Expect = 0.018
Identities = 40/203 (19%), Positives = 86/203 (42%), Gaps = 2/203 (0%)
Frame = +2
Query: 2 AGXPRGGGRSXN*WIPRAAGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIA 181
+ P RS + A + L+ ++E R ++ L+ ++E +R++ AI
Sbjct: 38 SSTPSPAKRSPAATLESAKNRNGEKLKREEEERKRRQREAELKLIEEETV--KRVEEAI- 94
Query: 182 EERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCN 361
++++ + ++ + T + E R+ + + K+ ++ E + + ++++
Sbjct: 95 -RKKVEESLQSEKIKMEILTLLEEGRKRLNEEVAAQLEEEKEASLIEAKEKEEREQQEKE 153
Query: 362 RRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGL-- 535
R + +R + +KE R+RK+ E +R+ RRK A +E L
Sbjct: 154 ERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEELQRQKEEAMRRKKAEEEEERLKQ 213
Query: 536 MMILVKSTGASKKEDHLSRKKKT 604
M +L K+ K LS K T
Sbjct: 214 MKLLGKNKSRPKLSFALSSKMTT 236
Score = 31.9 bits (69), Expect = 1.2
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 4/203 (1%)
Frame = +3
Query: 270 RRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRP 449
RR + ++ +RR +PK+ + + T + +R + +NR +K EE R
Sbjct: 12 RRHRSRSVTPKRRSPTPKRYKRQKSRSSTPSPAKRSPAATLESAKNRNGEKLKREEEERK 71
Query: 450 QPSKKEGAG--REKTATAEEGRLQPPMKED***FL*SLRERRRKK--ITYLEKKKQACRE 617
+ ++ E+T E ++ ++E SL+ + K +T LE+ ++ E
Sbjct: 72 RRQREAELKLIEEETVKRVEEAIRKKVEE-------SLQSEKIKMEILTLLEEGRKRLNE 124
Query: 618 ERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRKXTTSLRKKELEEEDY*ACGRSWKKK 797
E +KE + +++ + E R +L++ E E + A R K++
Sbjct: 125 EVAAQLEEEKEA-SLIEAKEKEEREQQEKEERERIAEENLKRVE-EAQRKEAMERQRKEE 182
Query: 798 TASPRLKXLQPPKKEDCNXRRKK 866
L+ LQ K+E RRKK
Sbjct: 183 ERYRELEELQRQKEE--AMRRKK 203
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 37.5 bits (83), Expect = 0.023
Identities = 39/162 (24%), Positives = 66/162 (40%)
Frame = +2
Query: 44 IPRAAGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 223
IP G ++R SP + +R K + R+ T+ + + + SP+K +
Sbjct: 200 IPPRRGDASR---SPLRGSRSRSISKTNSGSKSYSGERKSRSTSQSSDASI-SPRKRRLS 255
Query: 224 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRP 403
R+++ RR SP++ + + + + RR + P E RR+ + R P
Sbjct: 256 NSRRRSRSRSVRRSLSPRRRRIHSPFRSRSRSPIRRHRRPTHE--GRRQSPAPSRRRRSP 313
Query: 404 QPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 529
PP + RRR + RRS R R T A +R
Sbjct: 314 SPPAR----RRRSPSPPARRRRS-PSPPARRHRSPTPPARQR 350
Score = 37.5 bits (83), Expect = 0.023
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 131 SPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT 310
SP+K + R ++ RR SP++ + + + + RR + P E RR+
Sbjct: 248 SPRKRRLSNSRRRSRSRSVRRSLSPRRRRIHSPFRSRSRSPIRRHRRPTHEG---RRQSP 304
Query: 311 AIAEERRLQPPKKEDCNRRRKKTATAEERR-PQPPKKEDCNRRRKKTATIEERRS 472
A + RR P RRR + A RR P PP + R R T +RRS
Sbjct: 305 APSRRRRSPSPP---ARRRRSPSPPARRRRSPSPPAR----RHRSPTPPARQRRS 352
Score = 37.1 bits (82), Expect = 0.031
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Frame = +3
Query: 204 RRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRL- 380
RR+ A + RR SP RRR + A RR SP R + T A +RR
Sbjct: 300 RRQSPAPSRRRRSPSPP---ARRRRSPSPPARRRRSPSPP---ARRHRSPTPPARQRRSP 353
Query: 381 QPPKKEDRN----RRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPM 524
PP + R+ RRR+ + RR PS R + R P+
Sbjct: 354 SPPARRHRSPPPARRRRSPSPPARRRRSPSPPARRRRSPSPLYRRNRSPSPL 405
Score = 34.7 bits (76), Expect = 0.16
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 258 EDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAE 437
+D NRR+ K + EE D + +K A + + +KE++ RRR++
Sbjct: 759 KDKNRRKNKRSSREEVSSDDNGSSDSDVDDRKEAKRRRKEEKKTRKEEKKRRREERHRKR 818
Query: 438 ERRPQPSKKEGAGREKTATAE-EGRLQPPMKE 530
E R + K++ +E + T+E E +P +K+
Sbjct: 819 EER-RGGKEKHKKQELSDTSEGEVEARPKIKK 849
Score = 33.9 bits (74), Expect = 0.29
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 6/124 (4%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRK 347
K S K R+ ++ SP+K + R+++ RR SP++ +
Sbjct: 222 KTNSGSKSYSGERKSRSTSQSSDASISPRKRRLSNSRRRSRSRSVRRSLSPRRRRIHSPF 281
Query: 348 KKTATAEERRLQPPKKEDR------NRRRKKTATAEERRPQPSKKEGAGREKTATAEEGR 509
+ + + RR + P E R +RRR+ + RR PS R + A R
Sbjct: 282 RSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPSPPARRRRSPSPPARRRRSPSPPARRHR 341
Query: 510 LQPP 521
P
Sbjct: 342 SPTP 345
Score = 32.7 bits (71), Expect = 0.66
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +3
Query: 189 EDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAE 368
+D NRR+ K + EE D + +K A + + +KE+ RR+++
Sbjct: 759 KDKNRRKNKRSSREEVSSDDNGSSDSDVDDRKEAKRRRKEEKKTRKEEKKRRREERHRKR 818
Query: 369 ERRLQPPKKEDRNRRRKKTATAE-ERRPQPSKKE 467
E R + K++ + + T+ E E RP+ K E
Sbjct: 819 EER-RGGKEKHKKQELSDTSEGEVEARPKIKKGE 851
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 152 NRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 331
NRR+ K + EE D + +K A + + +KE+ RRR++ E R
Sbjct: 762 NRRKNKRSSREEVSSDDNGSSDSDVDDRKEAKRRRKEEKKTRKEEKKRRREERHRKREER 821
Query: 332 LQPPKKEDCNRRRKKTATAE-ERRPQPPKKEDCNRRR 439
+ K++ + T+ E E RP+ K E+ + +R
Sbjct: 822 -RGGKEKHKKQELSDTSEGEVEARPKIKKGEESDPKR 857
Score = 29.9 bits (64), Expect = 4.7
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Frame = +3
Query: 174 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKK 353
+SP + +R KT + K ++ + +RRL + ++ +R ++
Sbjct: 209 RSPLRGSRSRSISKTNSGSKSYSGERKSRSTSQSSDASISPRKRRLSNSRRRSRSRSVRR 268
Query: 354 TATAEERRLQPPKKEDRNR---RRKKTATAEERR--PQPSKK 464
+ + RR+ P + R+R RR + T E RR P PS++
Sbjct: 269 SLSPRRRRIHSPFR-SRSRSPIRRHRRPTHEGRRQSPAPSRR 309
>At2g33435.1 68415.m04098 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 979
Score = 37.1 bits (82), Expect = 0.031
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Frame = +2
Query: 104 NRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAE--ERRLQSPK 277
+R KK + K++ ++ + + E L KK++ RK+ A E +S +
Sbjct: 507 DRSKKLSREERVKDSSRKKEEAISSSREENLDKQKKDESTSNRKRKAEGECSTAETESIE 566
Query: 278 KEDCNRRRKK----TAIAEERRLQPPKKED--CNRRRKKTATAEERRPQPPKKEDCNRRR 439
+ +RR KK + EERR + KKED NR+ + E + + C+++R
Sbjct: 567 EHSKDRRGKKEETNSNCREERRDKKMKKEDLASNRKIEGEIPTTETKTMTDRDGLCSKKR 626
Query: 440 KKTATIEE 463
++ + +
Sbjct: 627 LRSLVVAD 634
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 884
Score = 37.1 bits (82), Expect = 0.031
Identities = 27/131 (20%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 268
K+ D +K K++ + K + ER ++ KEDR +R++K EE R +
Sbjct: 747 KENDLKSAEKVKGVESNKKSTDPHVKKDSRDVERPHRTNSKEDRGKRKEKE--KEEERSR 804
Query: 269 SPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTAT---AEERRPQPPKKEDCNRRR 439
+ E+ ++ +++ + K++ +RRR + + + +R P E + +
Sbjct: 805 HRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSK 864
Query: 440 KKTATIEERRS 472
+K+++ + RS
Sbjct: 865 RKSSSKRKNRS 875
Score = 35.9 bits (79), Expect = 0.071
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNR-RRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
KED +R++K EE R + + E+ ++ +R+++ + E S +K RR +
Sbjct: 787 KEDRGKRKEKE--KEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSP 844
Query: 363 AEERRLQPPKKEDR---NRRRKKTATAEERRPQPSK 461
RR + D + +RK ++ + R P P K
Sbjct: 845 VRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGK 880
Score = 34.7 bits (76), Expect = 0.16
Identities = 27/115 (23%), Positives = 52/115 (45%)
Frame = +2
Query: 158 RRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQ 337
R ++T +E+ +DR + + + + ++S KK + KK + ER +
Sbjct: 725 RIVETKGGKEKGDSQNDSKDRMKENDLKSAEKVKGVESNKKST-DPHVKKDSRDVERPHR 783
Query: 338 PPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRR 502
KED +R++K E R + + ++RR+ + E KR+ +RRR
Sbjct: 784 TNSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRR 838
Score = 33.1 bits (72), Expect = 0.50
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +2
Query: 206 KKEDRNRRRKKTAIAEERRLQSPK-KEDCN--RRRKKTAIAEER--RLQPPKKEDCNR-R 367
K+ D K + ++ P K+D R +T E+R R + K+E+ +R R
Sbjct: 747 KENDLKSAEKVKGVESNKKSTDPHVKKDSRDVERPHRTNSKEDRGKRKEKEKEEERSRHR 806
Query: 368 RKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDC-NRRRRKTATADERGLMMI 544
R + ++ ++RR P E + ++K+ + RRS +RR+R + ++DE
Sbjct: 807 RAENSSKDKRRRSPTSNESSDDSKRKSRS--RRRSVSPSPVRSRRKRSSPSSDE------ 858
Query: 545 LVKSTGASKKEDHLSRKKKTSVP 613
S+ SK++ RK ++ P
Sbjct: 859 ---SSDDSKRKSSSKRKNRSPSP 878
Score = 32.7 bits (71), Expect = 0.66
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAI--AEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNR 341
K + + D R K+ + AE+ + K+ + KK + ER ++ KED +
Sbjct: 733 KEKGDSQNDSKDRMKENDLKSAEKVKGVESNKKSTDPHVKKDSRDVERPHRTNSKEDRGK 792
Query: 342 RKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTAT 494
RK+K E R + + +++RR+ + E SK++ R ++ +
Sbjct: 793 RKEKEKEEERSRHRRAENSSKDKRRRSPTSNES--SDDSKRKSRSRRRSVS 841
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 897
Score = 37.1 bits (82), Expect = 0.031
Identities = 27/131 (20%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Frame = +2
Query: 89 KKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 268
K+ D +K K++ + K + ER ++ KEDR +R++K EE R +
Sbjct: 717 KENDLKSAEKVKGVESNKKSTDPHVKKDSRDVERPHRTNSKEDRGKRKEKE--KEEERSR 774
Query: 269 SPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTAT---AEERRPQPPKKEDCNRRR 439
+ E+ ++ +++ + K++ +RRR + + + +R P E + +
Sbjct: 775 HRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSK 834
Query: 440 KKTATIEERRS 472
+K+++ + RS
Sbjct: 835 RKSSSKRKNRS 845
Score = 35.9 bits (79), Expect = 0.071
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNR-RRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
KED +R++K EE R + + E+ ++ +R+++ + E S +K RR +
Sbjct: 757 KEDRGKRKEKE--KEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSP 814
Query: 363 AEERRLQPPKKEDR---NRRRKKTATAEERRPQPSK 461
RR + D + +RK ++ + R P P K
Sbjct: 815 VRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGK 850
Score = 34.7 bits (76), Expect = 0.16
Identities = 27/115 (23%), Positives = 52/115 (45%)
Frame = +2
Query: 158 RRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQ 337
R ++T +E+ +DR + + + + ++S KK + KK + ER +
Sbjct: 695 RIVETKGGKEKGDSQNDSKDRMKENDLKSAEKVKGVESNKKST-DPHVKKDSRDVERPHR 753
Query: 338 PPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRR 502
KED +R++K E R + + ++RR+ + E KR+ +RRR
Sbjct: 754 TNSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRR 808
Score = 33.1 bits (72), Expect = 0.50
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +2
Query: 206 KKEDRNRRRKKTAIAEERRLQSPK-KEDCN--RRRKKTAIAEER--RLQPPKKEDCNR-R 367
K+ D K + ++ P K+D R +T E+R R + K+E+ +R R
Sbjct: 717 KENDLKSAEKVKGVESNKKSTDPHVKKDSRDVERPHRTNSKEDRGKRKEKEKEEERSRHR 776
Query: 368 RKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDC-NRRRRKTATADERGLMMI 544
R + ++ ++RR P E + ++K+ + RRS +RR+R + ++DE
Sbjct: 777 RAENSSKDKRRRSPTSNESSDDSKRKSRS--RRRSVSPSPVRSRRKRSSPSSDE------ 828
Query: 545 LVKSTGASKKEDHLSRKKKTSVP 613
S+ SK++ RK ++ P
Sbjct: 829 ---SSDDSKRKSSSKRKNRSPSP 848
Score = 32.7 bits (71), Expect = 0.66
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAI--AEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNR 341
K + + D R K+ + AE+ + K+ + KK + ER ++ KED +
Sbjct: 703 KEKGDSQNDSKDRMKENDLKSAEKVKGVESNKKSTDPHVKKDSRDVERPHRTNSKEDRGK 762
Query: 342 RKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTAT 494
RK+K E R + + +++RR+ + E SK++ R ++ +
Sbjct: 763 RKEKEKEEERSRHRRAENSSKDKRRRSPTSNES--SDDSKRKSRSRRRSVS 811
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 36.7 bits (81), Expect = 0.041
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Frame = +2
Query: 83 SPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEE-R 259
S + D R +K +S + + +R + E ++EDR RRRK ++ ++ R
Sbjct: 104 SESESDGLRSRKRKSKSSRSKRRRKRSYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSR 163
Query: 260 RLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRR 439
+S +K+ +RR+ K + ++E ED +++ EE + K RR
Sbjct: 164 SSRSFRKKRSHRRKTKYSDSDE-----SSDEDSKAEISASSSGEEEDTKSKSK-----RR 213
Query: 440 KKTATIEERRSWKREDCNRRRRKTATADERGLMM-ILVKSTGASKKEDHLSRKKK 601
KK++ +RS K E T ++ + + VK+T E+ L + K+
Sbjct: 214 KKSSDSSSKRS-KGEKTKSGSDSDGTEEDSKMQVDETVKNTELELDEEELKKFKE 267
Score = 33.1 bits (72), Expect = 0.50
Identities = 25/97 (25%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Frame = +3
Query: 201 RRRKKTAIAEERRLQSPKKED----CNRRRKKT--AIAEERRLQSPKKEDCNRRKKKTAT 362
R+ K + +E L+S K++ RRRK++ + +E +S +E+ RR++K+++
Sbjct: 98 RKGKSDSESESDGLRSRKRKSKSSRSKRRRKRSYDSDSESEGSESDSEEEDRRRRRKSSS 157
Query: 363 --AEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 467
+ R + +K+ +RR+ K + ++E + SK E
Sbjct: 158 KRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAE 194
Score = 31.5 bits (68), Expect = 1.5
Identities = 28/137 (20%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Frame = +2
Query: 212 EDRNR-RRKKTAIAEERRLQSPKKEDCN----RRRKKTAIAEERRLQPPKKEDCNRRRKK 376
+D+N R + +ER+ +S + + + R+RK + +RR + D +
Sbjct: 82 QDKNGGERDDNSKGKERKGKSDSESESDGLRSRKRKSKSSRSKRRRKRSYDSDSESEGSE 141
Query: 377 TATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERG--LMMILV 550
+ + EE R + +++ ++R+K ++ RS++++ +RR+ K + +DE +
Sbjct: 142 SDSEEEDRRR--RRKSSSKRKKSRSS----RSFRKKRSHRRKTKYSDSDESSDEDSKAEI 195
Query: 551 KSTGASKKEDHLSRKKK 601
++ + ++ED S+ K+
Sbjct: 196 SASSSGEEEDTKSKSKR 212
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 36.3 bits (80), Expect = 0.054
Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Frame = +2
Query: 194 LQSPKKEDRNRRRKKTAIAEERR------LQSPKKEDCNRRRKKTAIAEERRLQPPKK-- 349
++ KK+ +N+ K EE+ ++ KE ++ K + EE +++
Sbjct: 88 VKKDKKKKKNKETKVEVTEEEKVKETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAVI 147
Query: 350 EDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRK---TATA 520
ED + +KK + + KE +++RK++ E + + +D +RRK
Sbjct: 148 EDGVKEKKKKKSKSKSVEADDDKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEENVVE 207
Query: 521 DERGLMMILVKSTGASKKEDHLSRKKKT 604
++ G+ VK T KE+ + K +T
Sbjct: 208 NDEGVQETPVKET--ETKENGNAEKSET 233
Score = 34.7 bits (76), Expect = 0.16
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 9/121 (7%)
Frame = +2
Query: 125 LQSPKKENCNRRRMKTAIAEERRLQSPK-------KEDRNRRRKKTAIAEERRLQSPKK- 280
++ KK+ N+ K + EE +++ KE + ++ K + EE +++
Sbjct: 88 VKKDKKKKKNKET-KVEVTEEEKVKETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAV 146
Query: 281 -EDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATI 457
ED + +KK + KE +++RK++ E + E+ RR+K+ +
Sbjct: 147 IEDGVKEKKKKKSKSKSVEADDDKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEENVV 206
Query: 458 E 460
E
Sbjct: 207 E 207
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Frame = +3
Query: 189 EDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAE 368
ED + +KK + KE +++RK++ E + E+ RRKK+ E
Sbjct: 148 EDGVKEKKKKKSKSKSVEADDDKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEENVVE 207
Query: 369 --ERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREK 485
E + P KE + +E + +G K
Sbjct: 208 NDEGVQETPVKETETKENGNAEKSETKSTNQKSGKGLSNSK 248
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 36.3 bits (80), Expect = 0.054
Identities = 32/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRK 347
+L+ +K + R ++ E+R + +K+D RR+++ I +E +++D RRK
Sbjct: 323 QLERHRKNEEARIAREVEAHEKRIRRELEKQDMLRRKREEQIRKEM-----ERQDRERRK 377
Query: 348 KKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGR 509
EE RL K+ + R K+ +RR + KKE EK EE R
Sbjct: 378 ------EEERLLREKQREEERYLKEQMRELQRREKFLKKETIRAEKMRQKEEMR 425
Score = 33.5 bits (73), Expect = 0.38
Identities = 26/109 (23%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Frame = +2
Query: 140 KENCNRRRMKTAIAEERRLQSP-KKEDRNRRRKKTAIAEERRLQS-PKKEDCNRRRKKTA 313
++N R + A E+R++ +K+D RR+++ I +E Q ++++ R ++
Sbjct: 328 RKNEEARIAREVEAHEKRIRRELEKQDMLRRKREEQIRKEMERQDRERRKEEERLLREKQ 387
Query: 314 IAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIE 460
EER L+ +E +RR+K E R + ++++ R+ K+ A ++
Sbjct: 388 REEERYLKEQMRE--LQRREKFLKKETIRAEKMRQKEEMRKEKEVARLK 434
Score = 29.9 bits (64), Expect = 4.7
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Frame = +3
Query: 237 RLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQP-PKKEDRNRR 413
+L+ +K + R ++ E+R + +K+D RRK++ +E Q ++++ R
Sbjct: 323 QLERHRKNEEARIAREVEAHEKRIRRELEKQDMLRRKREEQIRKEMERQDRERRKEEERL 382
Query: 414 RKKTATAEERRPQPSKKEGAGREK-----TATAEEGRLQPPMKED 533
++ EER + +E REK T AE+ R + M+++
Sbjct: 383 LREKQREEERYLKEQMRELQRREKFLKKETIRAEKMRQKEEMRKE 427
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 36.3 bits (80), Expect = 0.054
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRK--KTAIAEERRLQSPKKEDCNRRKKKTA 359
K D RR ++ +++ + +EDCN K + +R +S +D +K +
Sbjct: 89 KRDRERREREKEKGRKKQKKERSREDCNEESDDVKCGLKRKRTERSRHGDDDVEKKTRDE 148
Query: 360 TAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREK-TATAEEGRLQPPMKED 533
E+ + Q ++ ++ RRR + +R+ + ++ E G E A +G +K D
Sbjct: 149 QVEDEQKQLAEEVEKRRRRVQEWQELKRQNEEAQIESKGPETGKAWTLDGESDDEVKSD 207
Score = 34.7 bits (76), Expect = 0.16
Identities = 19/92 (20%), Positives = 37/92 (40%)
Frame = +2
Query: 209 KEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATA 388
K DR RR ++ +++ + +EDCN +R+ + + KKT
Sbjct: 89 KRDRERREREKEKGRKKQKKERSREDCNEESDDVKCGLKRKRTERSRHGDDDVEKKTRDE 148
Query: 389 EERRPQPPKKEDCNRRRKKTATIEERRSWKRE 484
+ Q E+ +RR++ +E + E
Sbjct: 149 QVEDEQKQLAEEVEKRRRRVQEWQELKRQNEE 180
Score = 33.1 bits (72), Expect = 0.50
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = +2
Query: 161 RMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCN--RRRKKTAIAEERRL 334
+ K+ +R+ + K++ RR + +R S ++E R RK + EE
Sbjct: 4 KSKSRKENDRKDRDRSKKENGRRDTTEMRSRVKRCDSEEEERIRIRRDRKSSDFEEEEYE 63
Query: 335 QPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCN 493
+ K+ ++ R + +R + + R K+ ++++ REDCN
Sbjct: 64 RDSKRRGEDKGRGRRERDRDRGKYLKRDRERREREKEKGRKKQKKERSREDCN 116
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 35.9 bits (79), Expect = 0.071
Identities = 22/115 (19%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Frame = +3
Query: 159 EE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCN 338
+E + +S K + +K++ + RR + ++ ++ +S +
Sbjct: 74 KEERRRSRKDRGKRKSDRKSSRSRRRRRDYSSSSSDSESESESEYSDSEESESEDERRRR 133
Query: 339 RRKKKTATAEER-RLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAE 500
+RK+K EE+ R + +++D+ +R K +++R + KK+ +K A E
Sbjct: 134 KRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRKEKKKKKSEKVKKGAVTE 188
Score = 32.7 bits (71), Expect = 0.66
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Frame = +2
Query: 182 EERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCN 361
EERR + R RK + RR S D + +E + + ED
Sbjct: 75 EERRRSRKDRGKRKSDRKSSRSRRRRRDYSSSSSDSESESE----SEYSDSEESESEDER 130
Query: 362 RRRKK----TATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 529
RRRK+ E+ R + +++D +R K +++R K++ + + +K A +
Sbjct: 131 RRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRKEKKKKKSEKVKKGAVTESW 190
Query: 530 GLMMILVKSTGASKKED 580
G I+ ++ +K+ +
Sbjct: 191 GKYGIIRETDMWNKRPE 207
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/105 (20%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAI 316
+ E RRR + + + +S +K R+RRR++ + +S + + + + +
Sbjct: 71 ESEKEERRRSRK---DRGKRKSDRKSSRSRRRRRDYSSSSSDSESESESEYSDSEESESE 127
Query: 317 AEERRLQPPKKE--DCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
E RR + +KE + + RK+ ++++ + +D +++RK+
Sbjct: 128 DERRRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRKE 172
Score = 31.1 bits (67), Expect = 2.0
Identities = 32/153 (20%), Positives = 64/153 (41%)
Frame = +3
Query: 231 ERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNR 410
E + S ++E R + E L+S + + R++ +R+ R R
Sbjct: 40 EEKDVSRRRESKRRTKDGNDSGSESGLESGSESEKEERRRSRKDRGKRKSDRKSSRSRRR 99
Query: 411 RRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYL 590
RR ++++ + + S+ E + E++ + +E R R+R+RK+
Sbjct: 100 RRDYSSSSSDSESE-SESEYSDSEESESEDERRR---------------RKRKRKEREEE 143
Query: 591 EKKKQACREERGLPGSGKKEGFQDCGRRSWKKK 689
EK+++ R E+ K + D R+ KKK
Sbjct: 144 EKERKRRRREKDKKKRNKSDKDGDKKRKEKKKK 176
Score = 30.3 bits (65), Expect = 3.5
Identities = 26/127 (20%), Positives = 58/127 (45%)
Frame = +2
Query: 131 SPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT 310
S ++E+ R + E L+S + ++ RR+ +R+ S +K +RRR++
Sbjct: 45 SRRRESKRRTKDGNDSGSESGLESGSESEKEERRRSRKDRGKRK--SDRKSSRSRRRRRD 102
Query: 311 AIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDC 490
+ + + + + + + E RR + +KE R ++ +ER+ +RE
Sbjct: 103 YSSSSSDSESESESEYSDSEESESEDERRRRKRKRKE---REEEE----KERKRRRREKD 155
Query: 491 NRRRRKT 511
++R K+
Sbjct: 156 KKKRNKS 162
Score = 29.9 bits (64), Expect = 4.7
Identities = 22/108 (20%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +3
Query: 171 LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
L+S + + RR+ +R+ S +K +RRR++ + +S + + + ++
Sbjct: 66 LESGSESEKEERRRSRKDRGKRK--SDRKSSRSRRRRRDYSSSSSDSESESESEYSDSEE 123
Query: 351 KTATAEERRLQPPKKE--DRNRRRKKTATAEERRPQ-PSKKEGAGREK 485
+ E RR + +KE + + RK+ ++++ + S K+G + K
Sbjct: 124 SESEDERRRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRK 171
Score = 29.1 bits (62), Expect = 8.2
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 7/115 (6%)
Frame = +2
Query: 185 ERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNR 364
E + S ++E + R + E L+S + + RR+ +R+ R
Sbjct: 40 EEKDVSRRRESKRRTKDGNDSGSESGLESGSESEKEERRRSRKDRGKRKSDRKSSRSRRR 99
Query: 365 RRKKTAT-------AEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRK 508
RR +++ +E + E + RR++ +ER ++E RRR K
Sbjct: 100 RRDYSSSSSDSESESESEYSDSEESESEDERRRRKRKRKEREEEEKERKRRRREK 154
>At5g10800.1 68418.m01255 RNA recognition motif (RRM)-containing
protein KIAA0332 gene, Homo sapiens, EMBL:HSAB2330
Length = 947
Score = 35.9 bits (79), Expect = 0.071
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Frame = +2
Query: 140 KENCNRRRMKTAIAEERRLQSPKKE-DRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAI 316
+E+ + MK + ER++ +K + + + E+R + D +R+R ++
Sbjct: 817 RESLEEQGMKNSEEIERKVAIHRKRLEADGLSGNQRVLPEKREKREDSRDSSRKRNRSE- 875
Query: 317 AEERRLQPPKKEDCNRR-RKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCN 493
++ R PP+K R R + R + ++ D ++ RK+ A R +R+D +
Sbjct: 876 SQNRSQSPPQKSLTRERVRDHDLDKDRHRDRDRQQHDLDKDRKRRAKSSSR---ERDDHD 932
Query: 494 RRRRKTATADERGL 535
R R + RG+
Sbjct: 933 RSRERDRDWRRRGM 946
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 35.9 bits (79), Expect = 0.071
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Frame = +3
Query: 156 AEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDC 335
AEE K++S KK +++K +E S KKE ++ KK + EE + SPK E
Sbjct: 469 AEE-KVKSSKK----KKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEE--VASPKSEKK 521
Query: 336 NRRKKKTA---------TAEERRLQPPKKEDRNRRRKKTATAEE 440
++K K +A E+ + KK+D+ ++ K + EE
Sbjct: 522 KKKKSKDTEAAVDAEDESAAEKSEKKKKKKDKKKKNKDSEDDEE 565
Score = 34.3 bits (75), Expect = 0.22
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = +3
Query: 204 RRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQ 383
++ KT E + K +++K +E S KKE ++ KK EE +
Sbjct: 457 KKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEE--VA 514
Query: 384 PPKKEDRNRRRKKTATAEERRPQPSKKEGAGREK 485
PK E + +++ K A S E + ++K
Sbjct: 515 SPKSEKKKKKKSKDTEAAVDAEDESAAEKSEKKK 548
Score = 33.5 bits (73), Expect = 0.38
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +2
Query: 296 RRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSW 475
++ KT E + K +++K +E KKE ++ KK IEE S
Sbjct: 457 KKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEEVASP 516
Query: 476 KREDCNRRRRK-TATADERGLMMILVKSTGASKKEDHLSRKK 598
K E +++ K T A + KS KK+D + K
Sbjct: 517 KSEKKKKKKSKDTEAAVDAEDESAAEKSEKKKKKKDKKKKNK 558
Score = 32.7 bits (71), Expect = 0.66
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERRLQ--SPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRR 301
++ +K ++++ K EE+ + S KKE + ++ KK + EE + SPK E +++
Sbjct: 468 EAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEE--VASPKSE---KKK 522
Query: 302 KKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED 424
KK + E + + + KK ++++ ++D
Sbjct: 523 KKKSKDTEAAVDAEDESAAEKSEKKKKKKDKKKKNKDSEDD 563
Score = 32.7 bits (71), Expect = 0.66
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 56 AGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRK 235
A + + KK+D K+ S KKE ++ K + EE + SPK E + +++
Sbjct: 469 AEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEE--VASPKSEKKKKKKS 526
Query: 236 K-TAIAEERRLQSPKKEDCNRRRKK 307
K T A + +S ++ +++KK
Sbjct: 527 KDTEAAVDAEDESAAEKSEKKKKKK 551
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +2
Query: 167 KTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ--SPKKEDCNRRRKKTAIAEERRLQP 340
K+ E ++ +K ++++KK EE+ + S KKE ++ KK + EE +
Sbjct: 458 KSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEE--VAS 515
Query: 341 PKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
PK E +++ K A E +++KK
Sbjct: 516 PKSEKKKKKKSKDTEAAVDAEDESAAEKSEKKKKK 550
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/75 (24%), Positives = 30/75 (40%)
Frame = +3
Query: 273 RRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQ 452
++ KT E + K ++KK +E KKE + ++ KK EE
Sbjct: 457 KKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEEVASP 516
Query: 453 PSKKEGAGREKTATA 497
S+K+ + K A
Sbjct: 517 KSEKKKKKKSKDTEA 531
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 35.9 bits (79), Expect = 0.071
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 3/184 (1%)
Frame = +2
Query: 65 SARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTA 244
+A + KK++ + KK + + + K + LQ KK+ + + +K
Sbjct: 350 TAAAKKKKKKKEKEKEKKAAAAAAATSSVEVKEEKQEESVTEPLQPKKKDAKGKAAEKKI 409
Query: 245 IAEERRLQS--PKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKK 418
R +Q ++++ R+KK EE +L+ ++E+ R+ + A AEE + + +K
Sbjct: 410 PKHVREMQEALARRQEAEERKKK---EEEEKLR-KEEEERRRQEELEAQAEEAKRKRKEK 465
Query: 419 EDCNRRRKKTATIEERRSWKREDCNRRRRKT-ATADERGLMMILVKSTGASKKEDHLSRK 595
E RKK K E R K A GL + S K + K
Sbjct: 466 EKEKLLRKKLEGKLLTAKQKTEAQKREAFKNQLLAAGGGLPVADNDGDATSSKRPIYANK 525
Query: 596 KKTS 607
KK+S
Sbjct: 526 KKSS 529
Score = 33.5 bits (73), Expect = 0.38
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +3
Query: 249 PKKEDCNRRRKKTAIAEE-RRLQS--PKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRK 419
PKK+D + + I + R +Q ++++ RKKK EE +L+ ++E+R R+ +
Sbjct: 395 PKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERKKK---EEEEKLR-KEEEERRRQEE 450
Query: 420 KTATAEERRPQPSKKE 467
A AEE + + +KE
Sbjct: 451 LEAQAEEAKRKRKEKE 466
Score = 32.3 bits (70), Expect = 0.87
Identities = 24/98 (24%), Positives = 43/98 (43%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
KK + R + A+A + + KK++ + +K EERR Q + K+K
Sbjct: 407 KKIPKHVREMQEALARRQEAEERKKKEEEEKLRKEE--EERRRQEELEAQAEEAKRKRKE 464
Query: 363 AEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAG 476
E+ +L K E + K+ A++R ++ AG
Sbjct: 465 KEKEKLLRKKLEGKLLTAKQKTEAQKREAFKNQLLAAG 502
Score = 29.9 bits (64), Expect = 4.7
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +2
Query: 53 AAGXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQS--PKKEDRNR 226
AA +A K+E LQ KK+ + K R +Q ++++
Sbjct: 369 AAAAAATSSVEVKEEKQEESVTEPLQPKKKDAKGKAAEKKIPKHVREMQEALARRQEAEE 428
Query: 227 RRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKK 376
R+KK EE +L+ ++E+ R+ + A AEE + + +KE RKK
Sbjct: 429 RKKK---EEEEKLRK-EEEERRRQEELEAQAEEAKRKRKEKEKEKLLRKK 474
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 35.9 bits (79), Expect = 0.071
Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAE-E 256
+ K + + +KK + +K+N N R +R +++ R+R R+K+ + +
Sbjct: 32 EDSKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDRD 91
Query: 257 RRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRR 436
R ++ D + R + + ER + +D + RR + R + + R
Sbjct: 92 RERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRS 151
Query: 437 RKKTATIEERRS-----WKREDCNRRRRKTATADER 529
R ++ + ERRS K E +R R ++ + +R
Sbjct: 152 RSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKR 187
Score = 30.3 bits (65), Expect = 3.5
Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Frame = +2
Query: 65 SARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKE-DRNRRRKKT 241
S + ++ + +D N+ + ++++ +R R K+ + R +S ++ DR+ R +
Sbjct: 50 SEKDNENGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHR 109
Query: 242 AIAEERRLQSPKKEDC-NRRRKKTAIAEERRLQPPKKEDCNRR--RKKTATAEERRPQPP 412
+ ER S K++D + +++ + RR + +E +RR R ++ + ERR +
Sbjct: 110 DRSRER---SEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSE 166
Query: 413 ---KKEDCNRRRKKTATIEERRS 472
K E +R R ++ + +RRS
Sbjct: 167 HRHKSEHRSRSRSRSRSKSKRRS 189
>At5g36650.1 68418.m04383 hypothetical protein
Length = 158
Score = 35.5 bits (78), Expect = 0.094
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Frame = +2
Query: 206 KKEDRN---RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE---RRLQPPKKEDCNRR 367
KK DR+ R KKT ++R ++ C RRR TA EE R L+ ++DC RR
Sbjct: 3 KKLDRSEAVRSEKKTLPWRQKR---SSRDCCWRRRVATAAGEEESRRLLEKKSRDDCRRR 59
Query: 368 RKKTATAEERRPQPPKKEDCNRRR---KKTATIEERRSWKREDCNRRRRKTATADERGLM 538
R TAT ++++ + RR ++ T+E+++ R + ++ G +
Sbjct: 60 R--TATEKKKKLDRTVEVGMERRSYIGEEDVTLEKKQIDSRLNLEKKSCGGCWRIRGGDV 117
Query: 539 MILVKSTGASKKEDHLSRKKKT 604
+ K G E++ S KK++
Sbjct: 118 IRSKKKRGGG--EENRSEKKRS 137
Score = 33.1 bits (72), Expect = 0.50
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 255 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEE--RRLQPPKKEDRNRRRKKTA 428
+ + R KKT ++R ++ C RR+ TA EE RRL K D RRR+ TA
Sbjct: 7 RSEAVRSEKKTLPWRQKR---SSRDCCWRRRVATAAGEEESRRLLEKKSRDDCRRRR-TA 62
Query: 429 TAEERRPQPSKKEGAGREKTATAEEGRLQ 515
T ++++ + + G R E+ L+
Sbjct: 63 TEKKKKLDRTVEVGMERRSYIGEEDVTLE 91
Score = 30.7 bits (66), Expect = 2.7
Identities = 32/113 (28%), Positives = 48/113 (42%)
Frame = +3
Query: 171 LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
L+ ++DC RRR TA ++++L + RR + I EE K+ D +
Sbjct: 48 LEKKSRDDCRRRR--TATEKKKKLDRTVEVGMERR---SYIGEEDVTLEKKQIDSRLNLE 102
Query: 351 KTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGR 509
K + R+ + D R +KK EE R + KK R K EE R
Sbjct: 103 KKSCGGCWRI---RGGDVIRSKKKRGGGEENRSE--KKRSRRRGKQIGEEENR 150
>At4g36860.2 68417.m05227 LIM domain-containing protein low
similarity to LIM-domain protein [Branchiostoma
floridae] GI:3360516, DRAL/Slim3/FHL2 [Homo sapiens]
GI:7209525; contains Pfam profile PF00412: LIM domain
Length = 547
Score = 35.5 bits (78), Expect = 0.094
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 143 ENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAE-ERRLQSPKKEDCNRRRKKTAIA 319
E R +++ A EERR+ + E+ +RR + + E E+ L + E+ RR K +
Sbjct: 90 EEYMRAQLEAAEEEERRVAQAQIEEEEKRRAEAQLEETEKLLAKARLEEEEMRRSKAQLE 149
Query: 320 EERRLQPPKKEDCN 361
E+ L +E N
Sbjct: 150 EDELLAKALQESMN 163
Score = 29.1 bits (62), Expect = 8.2
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +2
Query: 167 KTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAE-ERRLQPP 343
K+ E+ + E+ R + + A EERR+ + E+ +RR + + E E+ L
Sbjct: 75 KSETEEDDDDDEDEDEEYMRAQLEAAEEEERRVAQAQIEEEEKRRAEAQLEETEKLLAKA 134
Query: 344 KKEDCNRRRKKTATAEERRPQPPKKEDCN 430
+ E+ RR K E+ +E N
Sbjct: 135 RLEEEEMRRSKAQLEEDELLAKALQESMN 163
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 35.5 bits (78), Expect = 0.094
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +2
Query: 245 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRP--QPPKK 418
+A R SP+ + R R + I R ++ED R R+K + E R + +
Sbjct: 1 MAPSSRSPSPRTKRLRRARGEKEIGRSR-----EREDDGREREKRNSRERDRDIGRDRDR 55
Query: 419 EDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRK 595
E + ++RR RED +RRR T T DER +ST S + SR+
Sbjct: 56 ERKGEGERDREVGDKRRRSGREDTEKRRR-TRTDDERYSRGRHERSTSPSDRSHRSSRR 113
>At2g13320.1 68415.m01468 expressed protein anf genefinder
Length = 129
Score = 35.5 bits (78), Expect = 0.094
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +2
Query: 149 CNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEER 328
C RRR+ TA+ EE + +K R+ ++ + + + KK+ RRR+ +R
Sbjct: 30 CWRRRVATAVGEEESRRLMEKTRRDGEEEE--VTSDGGSWNGKKKLYRRRRRYLGEETDR 87
Query: 329 RLQPPKKEDCNR---RRKKTATAEERRPQPPKKEDCNRRRKK 445
+E+ R +++ EERR + +E+ RRR+K
Sbjct: 88 LAAEAGEEELRRLLENKRRGREEEERRRRNQIEEEERRRRRK 129
Score = 29.9 bits (64), Expect = 4.7
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Frame = +2
Query: 224 RRRKKTAIAEE--RRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEER 397
RRR TA+ EE RRL + D ++ + + KK+ RRR+ +R
Sbjct: 32 RRRVATAVGEEESRRLMEKTRRD----GEEEEVTSDGGSWNGKKKLYRRRRRYLGEETDR 87
Query: 398 RPQPPKKEDC-----NRRRKKTATIEERRSWKREDCNRRRRK 508
+E+ N+RR + RR+ E+ RRRRK
Sbjct: 88 LAAEAGEEELRRLLENKRRGREEEERRRRNQIEEEERRRRRK 129
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 35.1 bits (77), Expect = 0.12
Identities = 19/92 (20%), Positives = 45/92 (48%)
Frame = +3
Query: 249 PKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTA 428
PK ++ ++ K+ A +++ + KE+ ++ K+ E++ +K+D+ R+ K
Sbjct: 58 PKDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEK--- 114
Query: 429 TAEERRPQPSKKEGAGREKTATAEEGRLQPPM 524
E + + KE +E++ A R+ P+
Sbjct: 115 --ERKEKERKAKEKKDKEESEAAARYRILSPL 144
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/74 (20%), Positives = 38/74 (51%)
Frame = +2
Query: 203 PKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTA 382
PK +++ ++ K+ A +++ + KE+ ++ K+ E++ +K+D R+ K+
Sbjct: 58 PKDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERK 117
Query: 383 TAEERRPQPPKKED 424
E + + KE+
Sbjct: 118 EKERKAKEKKDKEE 131
Score = 32.3 bits (70), Expect = 0.87
Identities = 15/74 (20%), Positives = 38/74 (51%)
Frame = +3
Query: 180 PKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTA 359
PK ++ ++ K+ A +++ + KE+ ++ K+ E++ +K+D R++K+
Sbjct: 58 PKDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERK 117
Query: 360 TAEERRLQPPKKED 401
E + + KE+
Sbjct: 118 EKERKAKEKKDKEE 131
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/74 (18%), Positives = 36/74 (48%)
Frame = +2
Query: 134 PKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTA 313
PK + ++ + A +++ + KE++ ++ K+ E++ +K+D R+ K+
Sbjct: 58 PKDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERK 117
Query: 314 IAEERRLQPPKKED 355
E + + KE+
Sbjct: 118 EKERKAKEKKDKEE 131
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 35.1 bits (77), Expect = 0.12
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +2
Query: 92 KEDCNRMKKX*LQSP-KKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQ 268
+E+ +R K+ +SP K+ N + +ERR + K+DR+R ++ + +
Sbjct: 816 EEEKSRKKRE--KSPGKRSGGNDLSSSESSGDERRRKRYNKKDRHRNDSESDSSSD--YH 871
Query: 269 SPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
S K+ R K+ + E+R KK +RR KK++++ + K+ ++R++
Sbjct: 872 SRDKQGSRSRSKRRESSREKR-SSHKKHSKHRRTKKSSSSRYSSDEEQKESRREKKRRR 929
Score = 31.9 bits (69), Expect = 1.2
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +3
Query: 174 QSP-KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
+SP K+ N + +ERR + K+D R R + S K+ R K
Sbjct: 826 KSPGKRSGGNDLSSSESSGDERRRKRYNKKD--RHRNDSESDSSSDYHSRDKQGSRSRSK 883
Query: 351 KTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREK 485
+ ++ E+R KK ++RR KK++++ R +++ + REK
Sbjct: 884 RRESSREKR-SSHKKHSKHRRTKKSSSS--RYSSDEEQKESRREK 925
Score = 29.5 bits (63), Expect = 6.2
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Frame = +3
Query: 150 AIAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPK-KEDCNRRRKKTAIAEE------RR 308
++ +E + P +E+ + R K + ++RL P KE + + E +R
Sbjct: 766 SLGKELGFEVPMEEEI-KSRSKPEDSSDKRLDRPGLKEKVEEKTSSLTLGSEEEKSRKKR 824
Query: 309 LQSP-KKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEE---RRPQPSKKEGAG 476
+SP K+ N ++ +ERR + K+DR+R ++ ++ + R Q S+
Sbjct: 825 EKSPGKRSGGNDLSSSESSGDERRRKRYNKKDRHRNDSESDSSSDYHSRDKQGSRSRSKR 884
Query: 477 REKT 488
RE +
Sbjct: 885 RESS 888
>At3g48710.1 68416.m05319 expressed protein putative protein -
Arabidopsis thaliana, EMBL:AL078465.1
Length = 462
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Frame = +2
Query: 131 SPKKENCNRRRMKTAIAEERRLQSPKKEDRNR-----RRKKTAIAEERRLQ-SPKKEDCN 292
+P++EN +T +++ + K D+ R +++K A EE+ ++ S K +
Sbjct: 273 APEEENNKSEDTETEDEKDKAKEKTKSTDKKRLSKRTKKEKPAAEEEKSIKGSAKSSRKS 332
Query: 293 RRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
R+ + + Q K+D ++ + KT T+ +PQ +D + RKK
Sbjct: 333 FRQVDKSTTSSSKKQKVDKDDSSKEKGKTQTS---KPQAKGSKDQGQSRKK 380
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 35.1 bits (77), Expect = 0.12
Identities = 33/117 (28%), Positives = 41/117 (35%)
Frame = +1
Query: 157 PKNENCNRRRKKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNXXXXXXX 336
P N RRR TA+A + +P SP+ NRRR+ + RR P E+
Sbjct: 50 PPPANHLRRRTTTAVAGQPQPPSPE----NRRRRNHHHNDHRRQPPPLPEN--------- 96
Query: 337 XXXXXXLQPPKKEDCNRRRKKTATAEERRLQPPKKEDRNHXXXXXXXXXXXQPPKKE 507
QPP N R + T QPP R QPP E
Sbjct: 97 -RAATAGQPPSPSPDNHRHHRRTTTAAVAGQPP--HHRRTTAAAGTTTIAGQPPPPE 150
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 336 NRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
N R++ T A QPP N R++T TA +PQP E R + R
Sbjct: 36 NHRRRLTTAAG----QPPPPP-ANHLRRRTTTAVAGQPQPPSPENRRRRNHHHNDHRRQP 90
Query: 516 PPMKED 533
PP+ E+
Sbjct: 91 PPLPEN 96
Score = 30.7 bits (66), Expect = 2.7
Identities = 30/93 (32%), Positives = 38/93 (40%)
Frame = +2
Query: 134 PKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTA 313
P N RRR TA+A + + SP+ NRRR+ + RR P E+ R TA
Sbjct: 50 PPPANHLRRRTTTAVAGQPQPPSPE----NRRRRNHHHNDHRRQPPPLPEN----RAATA 101
Query: 314 IAEERRLQPPKKEDCNRRRKKTATAEERRPQPP 412
QPP N R + T QPP
Sbjct: 102 ------GQPPSPSPDNHRHHRRTTTAAVAGQPP 128
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 34.7 bits (76), Expect = 0.16
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = +2
Query: 245 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED 424
I++ R ++ P K +R R RR + P + RR + + + RR + +E
Sbjct: 101 ISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPR----RRSPRRSRSPRRRSRDDYREK 156
Query: 425 CNRRRKKTATIEERRSWKREDCNRRRR---KTATADER 529
R+R ++ + + R + +D + RRR ++A+ DE+
Sbjct: 157 DYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEK 194
Score = 32.3 bits (70), Expect = 0.87
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +3
Query: 171 LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
++ P K +R R RR +SP + RR + + + RR + +E + RK+
Sbjct: 107 VEPPPKSRRSRSRSPRRSRSPRRSRSPPR----RRSPRRSRSPRRRSRDDYREK-DYRKR 161
Query: 351 KTATAEERRLQPPKKEDRNRRRKKTATA---EERRPQPS-KKEGAGREKTATAEEGRLQP 518
+ + +RR + +K+ +RRR ++ +A E+RR + E ++ +A R P
Sbjct: 162 SRSRSYDRRERHEEKDRDHRRRTRSRSASPDEKRRVRGRYDNESRSHSRSLSASPARRSP 221
Score = 31.5 bits (68), Expect = 1.5
Identities = 30/147 (20%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Frame = +2
Query: 71 RXLQSPKKEDCNRMKK-X*LQSPKKENCN-RRRMKTAIAEERRLQSPKKEDRNRRRKKTA 244
R ++ P K +R + +SP++ RRR RR +++ R++ +
Sbjct: 105 RVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRS 164
Query: 245 IAEERRLQSPKKEDCNRR--RKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKK 418
+ +RR + +K+ +RR R ++A +E+R + ++ +R ++ +A R + P+
Sbjct: 165 RSYDRRERHEEKDRDHRRRTRSRSASPDEKRRVRGRYDNESRSHSRSLSASPAR-RSPRS 223
Query: 419 EDCNRRRKKTATIEERRSWKREDCNRR 499
+ ++RS +R RR
Sbjct: 224 SSPQKTSPAREVSPDKRSNERSPSPRR 250
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 34.7 bits (76), Expect = 0.16
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = +2
Query: 245 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED 424
I++ R ++ P K +R R RR + P + RR + + + RR + +E
Sbjct: 101 ISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPR----RRSPRRSRSPRRRSRDDYREK 156
Query: 425 CNRRRKKTATIEERRSWKREDCNRRRR---KTATADER 529
R+R ++ + + R + +D + RRR ++A+ DE+
Sbjct: 157 DYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEK 194
Score = 32.3 bits (70), Expect = 0.87
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +3
Query: 171 LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
++ P K +R R RR +SP + RR + + + RR + +E + RK+
Sbjct: 107 VEPPPKSRRSRSRSPRRSRSPRRSRSPPR----RRSPRRSRSPRRRSRDDYREK-DYRKR 161
Query: 351 KTATAEERRLQPPKKEDRNRRRKKTATA---EERRPQPS-KKEGAGREKTATAEEGRLQP 518
+ + +RR + +K+ +RRR ++ +A E+RR + E ++ +A R P
Sbjct: 162 SRSRSYDRRERHEEKDRDHRRRTRSRSASPDEKRRVRGRYDNESRSHSRSLSASPARRSP 221
Score = 31.5 bits (68), Expect = 1.5
Identities = 30/147 (20%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Frame = +2
Query: 71 RXLQSPKKEDCNRMKK-X*LQSPKKENCN-RRRMKTAIAEERRLQSPKKEDRNRRRKKTA 244
R ++ P K +R + +SP++ RRR RR +++ R++ +
Sbjct: 105 RVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRS 164
Query: 245 IAEERRLQSPKKEDCNRR--RKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKK 418
+ +RR + +K+ +RR R ++A +E+R + ++ +R ++ +A R + P+
Sbjct: 165 RSYDRRERHEEKDRDHRRRTRSRSASPDEKRRVRGRYDNESRSHSRSLSASPAR-RSPRS 223
Query: 419 EDCNRRRKKTATIEERRSWKREDCNRR 499
+ ++RS +R RR
Sbjct: 224 SSPQKTSPAREVSPDKRSNERSPSPRR 250
>At3g51650.1 68416.m05664 expressed protein
Length = 826
Score = 34.7 bits (76), Expect = 0.16
Identities = 27/127 (21%), Positives = 57/127 (44%)
Frame = +2
Query: 155 RRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRL 334
+RRM E + ++ RR+ + + ++E+ +R + + EERR
Sbjct: 233 QRRMLARQGENGTSSHESRVEKARRKAEEKRQARLEKEHSEEEERKQREEVARLVEERRR 292
Query: 335 QPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTA 514
+ + + K + A+E+ + +K+ RR+++ + S E+ ++R RK
Sbjct: 293 LRDEILEAEKCSKFSVAAKEKDTKEAEKKRQERRKERDRASSKSNS-DGEEVDKRTRK-E 350
Query: 515 TADERGL 535
T +RGL
Sbjct: 351 TEQKRGL 357
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 34.7 bits (76), Expect = 0.16
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +3
Query: 225 AEERRLQSPKK-EDCNRRRKKTAIAEERRLQSPKKEDCNRRKK-----KTATAEERRLQP 386
+E R PK E +RKK EER + ++ + RRK+ + EE RLQ
Sbjct: 372 SETRENHGPKDLEKLEIQRKKN---EERMRKEMERNERERRKEEERLMRERIKEEERLQR 428
Query: 387 PKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTA 491
++ + RR K ER + +K+ REK A
Sbjct: 429 EQRREVERREKFLQRENERAEKKKQKDEIRREKDA 463
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385:
'chromo' (CHRromatin Organization MOdifier)
Length = 2228
Score = 34.3 bits (75), Expect = 0.22
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 201 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRL 380
R+++K + + L+ K + +R KK+ Q+ K + +++KKK + L
Sbjct: 274 RKKRKRELNDGESLERCKTD--KKRAKKSLSKVGSSSQTTKSPESSKKKKKKNRVTLKSL 331
Query: 381 QPPKKEDRNRRRKKTATAEERRP-QPSKKEGAGREKTATAEEGRLQ 515
P+ + + K EERR + + K + E T + G LQ
Sbjct: 332 SKPQSKTETPEKVKKLPKEERRAVRATNKSSSCLEDTNSLPVGNLQ 377
>At4g35940.1 68417.m05113 expressed protein
Length = 451
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/101 (22%), Positives = 48/101 (47%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK 307
+ KKE RR+ + + ++++ + +KE + ++ KK E + + S K+ ++RR+K
Sbjct: 32 EKAKKEQ--RRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRS--HKRRRK 87
Query: 308 TAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCN 430
A+ K+ + N K + T E Q + C+
Sbjct: 88 EDGAKVDLFHKLKESEVNCLEKSSLTVERELLQSTSQNSCD 128
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +2
Query: 182 EERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCN 361
EE+ + +++DR +K +ER+ + KKE + R+ + E+R +
Sbjct: 31 EEKAKKEQRRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKR--------SH 82
Query: 362 RRRKKTATAEERRPQPPKKEDCNRRRKKTATIEER--RSWKREDCN 493
+RR+K A+ K+ + N K + T+E +S + C+
Sbjct: 83 KRRRKEDGAKVDLFHKLKESEVNCLEKSSLTVERELLQSTSQNSCD 128
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/112 (18%), Positives = 48/112 (42%)
Frame = +2
Query: 266 QSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
+ KKE RR+ + + ++++ + +KE ++ KK E + K+ RR++
Sbjct: 32 EKAKKEQ--RRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKED 89
Query: 446 TATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKK 601
A ++ K + N + + T + L S ++ + + K+K
Sbjct: 90 GAKVDLFHKLKESEVNCLEKSSLTVERELLQSTSQNSCDSTLNSNEMLPKQK 141
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 297 EERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAG 476
EE+ + +++D KK +ER+ + KKE + + R+ E+R +++ G
Sbjct: 31 EEKAKKEQRRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKEDG 90
>At2g28600.1 68415.m03476 expressed protein
Length = 502
Score = 34.3 bits (75), Expect = 0.22
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAI-AEERRLQSPKKEDCNRRKKKTAT 362
K D N +RKK + R+ S K + + AI A ++R +S K+ C T
Sbjct: 3 KGDDNVQRKKNKVT--RKKMSRKNDTATVSARIAAIIAAKKRRKSGKRSMCQGMCFTLPT 60
Query: 363 AEERRLQPPKKED---RNRRRKKTATAEERRPQPSKKEG 470
E+ + K D + +++KK + E+++P P EG
Sbjct: 61 LEDPFNERQGKADITKKKKKKKKVKSREDKKPSPMSIEG 99
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 EERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCN 361
EER+ + KKE + R+ +K AEE ++ K +++ K + EE+ P+K
Sbjct: 6 EERKKE--KKEKKERKERKRREAEELAVREKK---ISKKHKSKSKEEEK----PEKSKKK 56
Query: 362 RRRKKTATAEERRPQP---PKKEDCNRRRKKTATIE 460
++ + EE+ P P PKK ++++ K ++ E
Sbjct: 57 SKKYEEVEEEEKSPSPSPSPKKSKESKKKHKRSSDE 92
Score = 33.9 bits (74), Expect = 0.29
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 297 EERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAG 476
EER+ + KKE R+++K AEE + +E + ++ K+ + EE +P+ SKK+
Sbjct: 6 EERKKE--KKEKKERKERKRREAEELAV----REKKISKKHKSKSKEEEKPEKSKKKSKK 59
Query: 477 REKTATAEEGRLQPP 521
E+ E+ P
Sbjct: 60 YEEVEEEEKSPSPSP 74
Score = 33.5 bits (73), Expect = 0.38
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +3
Query: 228 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRN 407
EER+ + KKE R+ +K AEE ++ K +K K+ + EE + P+K +
Sbjct: 6 EERKKE--KKEKKERKERKRREAEELAVREKKIS----KKHKSKSKEEEK---PEKSKKK 56
Query: 408 RRRKKTATAEERRPQPSKKEGAGRE 482
++ + EE+ P PS +E
Sbjct: 57 SKKYEEVEEEEKSPSPSPSPKKSKE 81
Score = 29.5 bits (63), Expect = 6.2
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
KKE ++ +K E + +++ +++ K + EE+ +S KK +K +
Sbjct: 9 KKEKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKS----KKYEEVE 64
Query: 363 AEERRLQP---PKKEDRNRRRKKTATAEERRPQPSK 461
EE+ P PKK ++++ K ++ E SK
Sbjct: 65 EEEKSPSPSPSPKKSKESKKKHKRSSDESEEIVDSK 100
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 33.9 bits (74), Expect = 0.29
Identities = 27/97 (27%), Positives = 42/97 (43%)
Frame = +2
Query: 155 RRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRL 334
++ + A+ E RR + + +R K R +S ++E +RK+ E L
Sbjct: 141 KKEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELEL 200
Query: 335 QPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
+KE+ RRKK EE R K + NR R K
Sbjct: 201 LQRQKEEA-ARRKKLEEEEEIR-NSSKLSNGNRSRSK 235
Score = 33.5 bits (73), Expect = 0.38
Identities = 24/95 (25%), Positives = 40/95 (42%)
Frame = +2
Query: 224 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRP 403
++ K+ A+ E RR + + + K R + ++E +RK+ E
Sbjct: 141 KKEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELEL 200
Query: 404 QPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRK 508
+KE+ RR+K E R S K + NR R K
Sbjct: 201 LQRQKEEAARRKKLEEEEEIRNSSKLSNGNRSRSK 235
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/95 (22%), Positives = 37/95 (38%)
Frame = +3
Query: 201 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRL 380
++ K+ A+ E RR + + + K R +S ++E ++K+ E L
Sbjct: 141 KKEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELEL 200
Query: 381 QPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREK 485
+KE+ RR+K E R R K
Sbjct: 201 LQRQKEEAARRKKLEEEEEIRNSSKLSNGNRSRSK 235
>At3g51640.1 68416.m05663 expressed protein
Length = 826
Score = 33.9 bits (74), Expect = 0.29
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 224 RRRKKTAIAEERRLQSPKKEDCNRRRKKTA--IAEERRLQPPKKEDCNRRRKKTATAEER 397
+ R+K + RL+ E+ R++++ + EERR + + + K + A+E+
Sbjct: 254 KARRKAEEKRQARLEKEHSEEEERKQREEVARLVEERRRLRDEILEAEKCSKLSVAAKEK 313
Query: 398 RPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGL 535
+ +K+ RR+++ + S E+ ++R RK T +RGL
Sbjct: 314 DTKEAEKKRQERRKERDRASSKSNS-DGEEVDKRTRK-ETEQKRGL 357
Score = 31.9 bits (69), Expect = 1.2
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAI--AEERRL-----QSPKKEDRNRRRKKTAIAEERRLQSPKKED 286
Q +C+ R++ A AEE+R + ++E+R +R + + EERR + +
Sbjct: 240 QGENGTSCHESRVEKARRKAEEKRQARLEKEHSEEEERKQREEVARLVEERRRLRDEILE 299
Query: 287 CNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEER 466
+ K + A+E+ + +K+ RRK+ A + ++ D R RK+T E++
Sbjct: 300 AEKCSKLSVAAKEKDTKEAEKKR-QERRKERDRASSKSNSDGEEVD-KRTRKET---EQK 354
Query: 467 RSWKRED 487
R + D
Sbjct: 355 RGLYKSD 361
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/98 (18%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 201 RRRKKTAIAEERRLQSPKKEDCNRRRKKTA--IAEERRLQSPKKEDCNRRKKKTATAEER 374
+ R+K + RL+ E+ R++++ + EERR + + + K + A+E+
Sbjct: 254 KARRKAEEKRQARLEKEHSEEEERKQREEVARLVEERRRLRDEILEAEKCSKLSVAAKEK 313
Query: 375 RLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKT 488
+ +K+ + RR+++ + + + + R++T
Sbjct: 314 DTKEAEKKRQERRKERDRASSKSNSDGEEVDKRTRKET 351
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 33.5 bits (73), Expect = 0.38
Identities = 36/185 (19%), Positives = 77/185 (41%)
Frame = +3
Query: 297 EERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAG 476
E+ ++QS ++E + K + Q KE++ R+KK ++ + + + E
Sbjct: 299 EKEKVQSSEEESKVKESGKNEK-DASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKRE 357
Query: 477 REKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGKKEGF 656
+E +++ EE + + P ++ S E K+ EK++ + +E + KK
Sbjct: 358 KEDSSSQEESKEEEPENKE-KEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSE 416
Query: 657 QDCGRRSWKKKTIKSAEGAGRKXTTSLRKKELEEEDY*ACGRSWKKKTASPRLKXLQPPK 836
+ +K I+ E T +++ +E + + K+T K + K
Sbjct: 417 SQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKETEDDSSKT-ESEK 475
Query: 837 KEDCN 851
KE+ N
Sbjct: 476 KEENN 480
Score = 33.5 bits (73), Expect = 0.38
Identities = 27/131 (20%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERRLQSP----KKEDRNRRRKKTAIAEERRLQSPKKEDCNR 295
+S ++E N+ + ++ EE ++ K+E ++ + E++ +S +KE+ N
Sbjct: 366 ESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNS 425
Query: 296 RRK----------KTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 445
+K T +E++ K+E N K + + + KKE+ NR +
Sbjct: 426 EKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKETEDDSSKTESEKKEENNRNGET 485
Query: 446 TATIEERRSWK 478
T E+ K
Sbjct: 486 EETQNEQEQTK 496
Score = 33.5 bits (73), Expect = 0.38
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRK----------KTAIAEERRLQSPKKED 332
K+E ++ + E++ +S +KE+ N +K T +E++ K+E
Sbjct: 396 KEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRES 455
Query: 333 CNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 467
N K + + + KKE+ NR + T E+ S E
Sbjct: 456 GNDTSNKETEDDSSKTESEKKEENNRNGETEETQNEQEQTKSALE 500
>At3g52220.1 68416.m05737 expressed protein
Length = 237
Score = 33.5 bits (73), Expect = 0.38
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +2
Query: 263 LQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRK 442
L S +KED + R + + ++ +D R +KK EER+P +KE+ + RR+
Sbjct: 145 LASSQKEDADSARLPADTSGVKTVEDGP-DDVERDQKKDRR-EERKPAKREKEERHDRRE 202
Query: 443 KTATIEERRSWKREDCNRRRRKTATADER 529
K E+RS + D ++ +K +R
Sbjct: 203 KRER-HEKRSARDSDDRKKHKKEKKEKKR 230
>At3g01690.1 68416.m00101 expressed protein
Length = 361
Score = 33.5 bits (73), Expect = 0.38
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +2
Query: 227 RRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQ 406
R K IA RL P+ R + A PP++ R + + +T + +
Sbjct: 252 RHLKKFIATVERLPCPRMSSDQSERVRDA--------PPRRSMDRRVKPRQSTERREKEK 303
Query: 407 PPK---KEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERG 532
PPK K + + K + + RS + DC+ + RK+ ERG
Sbjct: 304 PPKSQSKMSSSSSKLKISFDQLDRSRRSVDCHEKTRKSVDQIERG 348
>At3g48120.1 68416.m05248 expressed protein
Length = 328
Score = 33.1 bits (72), Expect = 0.50
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNR---RKKKT 356
+E RRR ++ +ER ++ + RR E RR +S E NR R+ +
Sbjct: 92 RESSERRRYRSRERDERDKSHRRRSRSSERRSSYVDRERRRSRSRSAERRNRYGDRESRR 151
Query: 357 ATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED 533
+ R L P++E R+R K + R E + EK + +L ++D
Sbjct: 152 RSNRSRSLS-PRRERRSREDVKEKKPDYSRLIKGYDEMSAAEKVKAKMKLQLDETAEKD 209
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +2
Query: 140 KENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIA 319
+E+ RRR ++ +ER +S ++ R+ R+ + + ERR + RR +
Sbjct: 92 RESSERRRYRSRERDERD-KSHRRRSRSSERRSSYVDRERR--RSRSRSAERRNRYGDRE 148
Query: 320 EERRLQPPKKEDCNRRRKKTATAEERRP 403
RR + R R+ +E++P
Sbjct: 149 SRRRSNRSRSLSPRRERRSREDVKEKKP 176
Score = 29.5 bits (63), Expect = 6.2
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
Frame = +2
Query: 212 EDRNRRRKKTAIAEERRL-QSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATA 388
E R+ R K E+ R+ + +E RRR ++ +ER ++ + RR
Sbjct: 69 EIRSIRDKLKKKPEDPRVPERSYRESSERRRYRSRERDERDKSHRRRSRSSERRSSYVDR 128
Query: 389 EERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGAS 568
E RR + E NR + + RS RR + +++ L+K
Sbjct: 129 ERRRSRSRSAERRNRYGDRESRRRSNRSRSLSPRRERRSREDVKEKKPDYSRLIKGYDEM 188
Query: 569 KKEDHLSRKKK 601
+ + K K
Sbjct: 189 SAAEKVKAKMK 199
>At2g01100.3 68415.m00018 expressed protein
Length = 247
Score = 33.1 bits (72), Expect = 0.50
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 153 IAEE*KLQSPKKEDCNRR--RKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKK 326
+ EE K + +K++ + +K A A + K + ++K A E +S
Sbjct: 9 MVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSS 68
Query: 327 EDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEG 506
+ RRK + + + RR +D +RR++K + ++RR + G ++ + +E
Sbjct: 69 SEV-RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYESGSEDEL 127
Query: 507 RLQ 515
R++
Sbjct: 128 RMK 130
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 176 IAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNR--RRKKTAIAEERRLQPPKK 349
+ E++R K+E + +K A + + K ++ +RK+ A +E
Sbjct: 10 VEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSSS 69
Query: 350 EDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADE 526
E RR+ + + + RR +D +RR++K + ++RRS D + ++ + DE
Sbjct: 70 EV--RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYESGSEDE 126
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/88 (21%), Positives = 43/88 (48%)
Frame = +2
Query: 158 RRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQ 337
++++ A + ++ K + +RK+ A A E +S + RR+ + + + RR
Sbjct: 29 QKLEAAANAKADTETKVKRSKGPKRKQRA-ASESSSESDSSSEV-RRKSRRSHNKHRRHA 86
Query: 338 PPKKEDCNRRRKKTATAEERRPQPPKKE 421
+D +RR++K + ++RR P +
Sbjct: 87 HSDSDDSDRRKEKKSRRQKRRSLSPSDD 114
>At2g01100.2 68415.m00017 expressed protein
Length = 247
Score = 33.1 bits (72), Expect = 0.50
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 153 IAEE*KLQSPKKEDCNRR--RKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKK 326
+ EE K + +K++ + +K A A + K + ++K A E +S
Sbjct: 9 MVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSS 68
Query: 327 EDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEG 506
+ RRK + + + RR +D +RR++K + ++RR + G ++ + +E
Sbjct: 69 SEV-RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYESGSEDEL 127
Query: 507 RLQ 515
R++
Sbjct: 128 RMK 130
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 176 IAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNR--RRKKTAIAEERRLQPPKK 349
+ E++R K+E + +K A + + K ++ +RK+ A +E
Sbjct: 10 VEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSSS 69
Query: 350 EDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADE 526
E RR+ + + + RR +D +RR++K + ++RRS D + ++ + DE
Sbjct: 70 EV--RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYESGSEDE 126
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/88 (21%), Positives = 43/88 (48%)
Frame = +2
Query: 158 RRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQ 337
++++ A + ++ K + +RK+ A A E +S + RR+ + + + RR
Sbjct: 29 QKLEAAANAKADTETKVKRSKGPKRKQRA-ASESSSESDSSSEV-RRKSRRSHNKHRRHA 86
Query: 338 PPKKEDCNRRRKKTATAEERRPQPPKKE 421
+D +RR++K + ++RR P +
Sbjct: 87 HSDSDDSDRRKEKKSRRQKRRSLSPSDD 114
>At2g01100.1 68415.m00016 expressed protein
Length = 247
Score = 33.1 bits (72), Expect = 0.50
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 153 IAEE*KLQSPKKEDCNRR--RKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKK 326
+ EE K + +K++ + +K A A + K + ++K A E +S
Sbjct: 9 MVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSS 68
Query: 327 EDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEG 506
+ RRK + + + RR +D +RR++K + ++RR + G ++ + +E
Sbjct: 69 SEV-RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYESGSEDEL 127
Query: 507 RLQ 515
R++
Sbjct: 128 RMK 130
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 176 IAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNR--RRKKTAIAEERRLQPPKK 349
+ E++R K+E + +K A + + K ++ +RK+ A +E
Sbjct: 10 VEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSSS 69
Query: 350 EDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADE 526
E RR+ + + + RR +D +RR++K + ++RRS D + ++ + DE
Sbjct: 70 EV--RRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYESGSEDE 126
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/88 (21%), Positives = 43/88 (48%)
Frame = +2
Query: 158 RRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQ 337
++++ A + ++ K + +RK+ A A E +S + RR+ + + + RR
Sbjct: 29 QKLEAAANAKADTETKVKRSKGPKRKQRA-ASESSSESDSSSEV-RRKSRRSHNKHRRHA 86
Query: 338 PPKKEDCNRRRKKTATAEERRPQPPKKE 421
+D +RR++K + ++RR P +
Sbjct: 87 HSDSDDSDRRKEKKSRRQKRRSLSPSDD 114
>At1g01490.1 68414.m00065 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 177
Score = 33.1 bits (72), Expect = 0.50
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 309 LQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKT 488
L P KE ++KK +E +PPKKE + + E + + KKEG +++
Sbjct: 67 LVGPAKEP--EKEKKEEPKKEGGGEPPKKEGEAPKEEGKKEGEAPKKEEEKKEGGDKKEG 124
Query: 489 ATAEEGRLQP 518
++ + QP
Sbjct: 125 EKKDQPQAQP 134
>At5g55660.1 68418.m06940 expressed protein similar to unknown protein
(pir||T08929)
Length = 778
Score = 32.7 bits (71), Expect = 0.66
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 10/189 (5%)
Frame = +3
Query: 303 RRLQSPKKEDCNRRKKKTATAEERRLQPPKK-EDRNRRRKKTATAEERRPQPSKKEGAGR 479
+R ++PKK +++ +R + KK E+ R KK+ + + K++
Sbjct: 484 KRKRTPKKSS----PAAGSSSSKRSAKSQKKTEEATRTNKKSVAHSDDESEEEKEDDEEE 539
Query: 480 EKTATAEEGRLQ-----PPMKED***FL*SLRERRRKKITYLEKKKQACREERGLPGSGK 644
EK EE + P ED L E + E +++ +++RG S
Sbjct: 540 EKEQEVEEEEEENENGIPDKSED---EAPQLSESEENVESEEESEEETKKKKRGSRTSSD 596
Query: 645 KEGFQDCGRRSWKKKTIKSAEGAGRKXT----TSLRKKELEEEDY*ACGRSWKKKTASPR 812
K+ + G+ KK + + +K T RKK ++ D S +KKT P
Sbjct: 597 KK--ESAGKSRSKKTAVPTKSSPPKKATQKRSAGKRKKSDDDSDTSPKASSKRKKTEKPA 654
Query: 813 LKXLQPPKK 839
+ P K
Sbjct: 655 KEQAAAPLK 663
Score = 31.1 bits (67), Expect = 2.0
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Frame = +3
Query: 174 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKK 353
++ K E+ K+ + + ++ P+ ED KKT +E + +KED
Sbjct: 208 ETNKGEEVKEANKEDDVEADTKVAEPEVED-----KKTESKDENEDKEEEKEDEKEESMD 262
Query: 354 TATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGR-EKT 488
E+ KED ++ + S K G G+ EKT
Sbjct: 263 DKEDEKEESNDDDKEDEKEESNDDKEDKKEDIKKSNKRGKGKTEKT 308
Score = 29.9 bits (64), Expect = 4.7
Identities = 22/100 (22%), Positives = 39/100 (39%)
Frame = +3
Query: 204 RRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQ 383
+RK+T S + + +KKT A +S D ++K EE + Q
Sbjct: 484 KRKRTPKKSSPAAGSSSSKRSAKSQKKTEEATRTNKKSVAHSDDESEEEKEDDEEEEKEQ 543
Query: 384 PPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEE 503
++E+ +E+ PQ S+ E + + EE
Sbjct: 544 EVEEEEEENENGIPDKSEDEAPQLSESEENVESEEESEEE 583
Score = 29.1 bits (62), Expect = 8.2
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 13/148 (8%)
Frame = +2
Query: 209 KEDRNRRRKKT---------AIAEERRLQSPKK-EDCNRRRKKTAIAEERRLQPPKKEDC 358
++++ +RK+T + + +R +S KK E+ R KK+ + + K++D
Sbjct: 478 EKEKGVKRKRTPKKSSPAAGSSSSKRSAKSQKKTEEATRTNKKSVAHSDDESEEEKEDDE 537
Query: 359 NRRRKKTATAEERRPQ---PPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 529
+++ EE + P K ED + ++ E E+ +++R + T+ +
Sbjct: 538 EEEKEQEVEEEEEENENGIPDKSEDEAPQLSESEENVESEEESEEETKKKKRGSRTSSD- 596
Query: 530 GLMMILVKSTGASKKEDHLSRKKKTSVP 613
K A K SR KKT+VP
Sbjct: 597 -------KKESAGK-----SRSKKTAVP 612
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 32.7 bits (71), Expect = 0.66
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 47 PRAAGXSARXLQSPKKEDCNRMKKX*-LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRN 223
PR S R +++ +K D MK+ ++ KE N +K I + + KKE+R
Sbjct: 89 PRTHRSSGRFVKN-RKPDLEEMKRQREIKKAYKERVNE--LKEEIRSNKVEKRKKKEERE 145
Query: 224 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKED 355
+R+K+ + +LQ K + KK ++++++R Q K D
Sbjct: 146 KRKKENVLRTGTKLQ---KITNPKTLKKISMSKKQRKQLKKIPD 186
>At5g14280.1 68418.m01670 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 572
Score = 32.3 bits (70), Expect = 0.87
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 338 PPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRED 487
PP+K R +TAT EE + + KK + K A+ R W ED
Sbjct: 23 PPQKRTSKRTASETATEEETKKKKKKK---TKHNTKMASPPSNRIWNEED 69
>At4g00238.1 68417.m00030 DNA-binding storekeeper protein-related
contains Pfam PF04504: Protein of unknown function,
DUF573; similar to storekeeper protein GI:14268476
[Solanum tuberosum]
Length = 345
Score = 32.3 bits (70), Expect = 0.87
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 201 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRL 380
RR+KK AE ++S KKE + E +SP + +R + T+ + +
Sbjct: 67 RRKKKEGAAESPAVKSGKKEGAAESPAVKSGNNEGATESPAVKSGKKRASEGTTSRDMHV 126
Query: 381 QPPKKEDRNRR 413
+ KKE N++
Sbjct: 127 KRIKKEGDNKK 137
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 270 RRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRP 449
RR+KK AE ++S KKE + E + P + +R + T+ +
Sbjct: 67 RRKKKEGAAESPAVKSGKKEGAAESPAVKSGNNEGATESPAVKSGKKRASEGTTSRDMHV 126
Query: 450 QPSKKEGAGRE 482
+ KKEG ++
Sbjct: 127 KRIKKEGDNKK 137
Score = 29.5 bits (63), Expect = 6.2
Identities = 22/88 (25%), Positives = 36/88 (40%)
Frame = +2
Query: 224 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRP 403
RR+KK AE ++S KKE + E + P + +R + T+ +
Sbjct: 67 RRKKKEGAAESPAVKSGKKEGAAESPAVKSGNNEGATESPAVKSGKKRASEGTTSRDMHV 126
Query: 404 QPPKKEDCNRRRKKTATIEERRSWKRED 487
+ KKE N++ +R W ED
Sbjct: 127 KRIKKEGDNKKG------HAQRVWSEED 148
>At2g44200.1 68415.m05500 expressed protein
Length = 493
Score = 32.3 bits (70), Expect = 0.87
Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Frame = +2
Query: 209 KEDRNRRRKKTAIAEERRLQSPKKEDCNRRR---KKTAIAEERRLQPPKK--EDCNRRRK 373
K + +K+++ + + E+ N R+ +KT+ +R + P+ ED ++ R+
Sbjct: 185 KRKSGKHQKQSSSRQRSDSEEDSGEENNGRKSHHQKTSGTHDRHYERPRSDLEDESKGRE 244
Query: 374 KTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVK 553
E+R + +D ++RR++ T ERR + +D ++RR ER + +
Sbjct: 245 SRDRHYEKRRS--ELDDGHKRRERHDTHYERRRSEMDDESKRRESRDNHYERRRSDLDDE 302
Query: 554 STGASKKEDHLSRKK 598
S + H R++
Sbjct: 303 SKRRESHDKHFERQR 317
Score = 30.7 bits (66), Expect = 2.7
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Frame = +2
Query: 152 NRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 331
++RR + ERR + +D ++RR+ ERR +S ++ RR E +R
Sbjct: 261 HKRRERHDTHYERRRS--EMDDESKRRESRDNHYERR-RSDLDDESKRRESHDKHFERQR 317
Query: 332 L----QPPKKEDCNRRRKKTATAE-ERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNR 496
+ ++E ++RR+ E +RR P ++ NR K E +S+ +ED R
Sbjct: 318 SDLDDEYKRRESQDKRRRSDIDDEPKRRDARPNEKYRNRSPKGGVERENLKSYGQEDKKR 377
Query: 497 R 499
+
Sbjct: 378 K 378
Score = 30.3 bits (65), Expect = 3.5
Identities = 27/137 (19%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Frame = +2
Query: 206 KKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRR---KK 376
+K + + K +E + + +K + +K+++ + + E+ N R+ +K
Sbjct: 163 RKSVEEKGKGKDGDTKEHKKKHKRKS--GKHQKQSSSRQRSDSEEDSGEENNGRKSHHQK 220
Query: 377 TATAEER---RPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMIL 547
T+ +R RP+ +++ R + E+RRS + +D ++RR + T ER +
Sbjct: 221 TSGTHDRHYERPRSDLEDESKGRESRDRHYEKRRS-ELDDGHKRRERHDTHYERRRSEMD 279
Query: 548 VKSTGASKKEDHLSRKK 598
+S +++H R++
Sbjct: 280 DESKRRESRDNHYERRR 296
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 32.3 bits (70), Expect = 0.87
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKE-DCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
+E +R R+K EER + +++ D +R K ++R +S + + +R +++ +
Sbjct: 84 REHRDRDREKDVDKEERNGKDRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQEREKS 143
Query: 363 AE-ERRLQPPKKEDRNRRRKKTATAEERRPQ 452
E E + + K DR+RRR K ++ P+
Sbjct: 144 LEIEPKERETKDRDRDRRRHKDKKEDKVEPE 174
>At1g79200.1 68414.m09234 expressed protein
Length = 159
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 215 DRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQ-PPKKEDCNRRRKKTATAE 391
+R+ + KK + A S E+ +R + T +ERR + KK+ + + K++T++
Sbjct: 4 ERSSKEKKRSRARSEDSSSSDYEEKVKRHRGTEKDDERRSRRSDKKDKKSHKHHKSSTSK 63
Query: 392 ERRPQPPKKEDCNRRRKKTATIEE 463
+ + PKK+ K I E
Sbjct: 64 KSKDDKPKKKHTESDHKLKEGIPE 87
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +3
Query: 189 EDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAE 368
E ++ +K++ E S +E R R E R +S KK+ + + K++T++
Sbjct: 4 ERSSKEKKRSRARSEDSSSSDYEEKVKRHRGTEKDDERRSRRSDKKDKKSHKHHKSSTSK 63
Query: 369 ERRLQPPKKE 398
+ + PKK+
Sbjct: 64 KSKDDKPKKK 73
>At1g56110.1 68414.m06443 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 522
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +3
Query: 222 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKED 401
+ +E + P + +KK A EE +ED + +KKK + + +K +
Sbjct: 431 LKQEEEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKKKEKRKMETAEENEKSE 490
Query: 402 RNRRRKKTATAEERRPQ-PSKKEGAGREKTA 491
+ + +K A EE S K+ + K+A
Sbjct: 491 KKKTKKSKAGGEEETDDGHSTKKKKKKSKSA 521
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/95 (20%), Positives = 46/95 (48%)
Frame = +3
Query: 153 IAEE*KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKED 332
+ +E + + P + +KK A EE +ED + ++KK E+R++++ ++ +
Sbjct: 431 LKQEEEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKK---KEKRKMETAEENE 487
Query: 333 CNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAE 437
+ +KK + + +++KK+ +AE
Sbjct: 488 KSEKKKTKKSKAGGEEETDDGHSTKKKKKKSKSAE 522
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 291 IAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEG 470
+ +E + P + KKK A EE +ED++ ++KK +E+R + +E
Sbjct: 431 LKQEEEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKK----KEKRKMETAEEN 486
Query: 471 AGREKTAT 494
EK T
Sbjct: 487 EKSEKKKT 494
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/110 (17%), Positives = 49/110 (44%)
Frame = +2
Query: 131 SPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT 310
+P+K + + + +E + P + +KK A EE +ED + ++KK
Sbjct: 416 APRKNVDVMKEVIENLKQEEEGKEPVDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKK- 474
Query: 311 AIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIE 460
E+R+++ ++ + + ++K + + +++KK+ + E
Sbjct: 475 --KEKRKMETAEENEKSEKKKTKKSKAGGEEETDDGHSTKKKKKKSKSAE 522
>At5g51840.1 68418.m06427 expressed protein
Length = 245
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +3
Query: 180 PKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTA---IAEERRLQSPKKEDCNRRKK 350
PKK RKK ++ ER + KE+ R+ + A + +E + ED N +
Sbjct: 69 PKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQSLCEDLNSLVQ 128
Query: 351 KTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEE 503
+++ + RL+ K+ +++T+ ++ +P K A A +
Sbjct: 129 QSSNTQYARLEELKRRLEALNPNRSSTSIQQVQEPETKSVVDSAPAANANQ 179
Score = 29.5 bits (63), Expect = 6.2
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = +2
Query: 134 PKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTA---IAEERRLQSPKKEDCNRRRK 304
PKK R K ++ ER + KE+ R+ + A + +E + ED N +
Sbjct: 69 PKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQSLCEDLNSLVQ 128
Query: 305 KTAIAEERRLQPPKK--EDCNRRRKKTATAEERRPQ 406
+++ + RL+ K+ E N R T+ + + P+
Sbjct: 129 QSSNTQYARLEELKRRLEALNPNRSSTSIQQVQEPE 164
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +3
Query: 246 SPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKT 425
S ED RRR+K +++++ Q ++ ++ E EDR+RR+KK+
Sbjct: 208 SSDSEDERRRRRKAKKSKKKQKQRKERRRRYSSSSSESSESESASDSDSDEDRSRRKKKS 267
Query: 426 ATAEERR 446
+R
Sbjct: 268 KRHSNKR 274
Score = 30.7 bits (66), Expect = 2.7
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 177 SPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAE----ERRLQSPKKEDCNRR 344
S ED RRR+K + ++ Q +KE RRR ++ +E E S ED +RR
Sbjct: 208 SSDSEDERRRRRKAK--KSKKKQKQRKE--RRRRYSSSSSESSESESASDSDSDEDRSRR 263
Query: 345 KKKTATAEERR 377
KKK+ +R
Sbjct: 264 KKKSKRHSNKR 274
Score = 29.1 bits (62), Expect = 8.2
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 200 SPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAE----ERRLQPPKKEDCNRR 367
S ED RRR+K + ++ Q +KE RRR ++ +E E ED +RR
Sbjct: 208 SSDSEDERRRRRKAK--KSKKKQKQRKE--RRRRYSSSSSESSESESASDSDSDEDRSRR 263
Query: 368 RKKTATAEERR 400
+KK+ +R
Sbjct: 264 KKKSKRHSNKR 274
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +2
Query: 269 SPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKT 448
S ED RRR+K + ++ Q +KE RRR ++++E + D + R +
Sbjct: 208 SSDSEDERRRRRKAK--KSKKKQKQRKE--RRRRYSSSSSESSESESASDSDSDEDRSRR 263
Query: 449 ATIEERRSWKR 481
+R S KR
Sbjct: 264 KKKSKRHSNKR 274
>At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-related
contains Pfam profile: PF05558 DREPP plasma membrane
polypeptide
Length = 168
Score = 31.9 bits (69), Expect = 1.2
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Frame = +2
Query: 107 RMKKX*LQSPKKENC--NRRRMKTAIAEER--RLQSPKKEDRNRRRKKTAIAE-ERRLQS 271
RMKK +SP K+ + + + EE + + P KE + + A E E +
Sbjct: 11 RMKKLFEKSPAKKEVVEEEKPREVEVVEEVVVKTEEPAKEGETKPEEIIATGEKEIEIVE 70
Query: 272 PKKEDCN---------RRRKKTAIAEERRLQP-PKKEDCNRRRKKTATAEERRPQPPKKE 421
KKE+ KK A+ EE++ P +K+ KK A E++ + KKE
Sbjct: 71 EKKEEAKPVEVPVLAAAEEKKPAVEEEKKTAPVEEKKPAVEEEKKPAVEEKKPVEEEKKE 130
Score = 29.9 bits (64), Expect = 4.7
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Frame = +3
Query: 174 QSPKKEDCNRRRK--KTAIAEER--RLQSPKKEDCNRRRKKTAIAE-ERRLQSPKKEDCN 338
+SP K++ K + + EE + + P KE + + A E E + KKE+
Sbjct: 18 KSPAKKEVVEEEKPREVEVVEEVVVKTEEPAKEGETKPEEIIATGEKEIEIVEEKKEEAK 77
Query: 339 RRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQ-PSKKEGAGREKTATAEE 503
+ A E + +P +E+ KKTA EE++P +K+ A EK EE
Sbjct: 78 PVEVPVLAAAEEK-KPAVEEE-----KKTAPVEEKKPAVEEEKKPAVEEKKPVEEE 127
>At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing
protein KIAA0332 - Homo sapiens, EMBL:AB002330
Length = 946
Score = 31.9 bits (69), Expect = 1.2
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAE------ERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRR 298
+++ RRR++ A+ E E+ +++P++ +R + + + L P + NR
Sbjct: 793 EEQRQKRRRIEVALIEYRETLEEQGMKNPEEIERKVEINRKRLEVDYGLSGPNEG--NRN 850
Query: 299 RKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSW- 475
+K +I E + K+ED KK E + PP+K R +R
Sbjct: 851 QK--SIIERKE----KREDSQESSKKRHRGENKSQSPPRKSSTRERDHDLGRDRDRERHR 904
Query: 476 ---KREDCNR---RRRKTATAD 523
++ D NR RR K+++ D
Sbjct: 905 DRDRQHDLNRDRDRREKSSSHD 926
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/105 (22%), Positives = 43/105 (40%)
Frame = +3
Query: 171 LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKK 350
L+ +E +KK ER +S +K + R+ + EER KK + +
Sbjct: 9 LEKTVEEGAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSKKSRGDGEEN 68
Query: 351 KTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREK 485
+ R + D++R R K E R + S +E + +E+
Sbjct: 69 GGGKRDRERERHRSSRDKDRERDK--VREGSRDKESDRERSSKER 111
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 31.9 bits (69), Expect = 1.2
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATA 365
+E+ K+ E + + ++E+ N K+ + +S +K++ ++ T
Sbjct: 524 EEEKEEEEKQEEEKAEEKEEKKEEENENGIPDKSEDEAPQPSESEEKDESEEHSEEETTK 583
Query: 366 EER--RLQPPKKEDRNRRRKKTATAEERRPQP----SKKEGAGREKT 488
++R RL KKE R R K A + P K+ A R+KT
Sbjct: 584 KKRGSRLSAGKKESAGRARNKKAVVAAKSSPPEKITQKRSSAKRKKT 630
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
K E+ + KK+ + + K+E+ + +K EE++ ++E+ N K+
Sbjct: 504 KSEEATKVVKKSLAHSDDESEEEKEEEEKQEEEKAEEKEEKK----EEENENGIPDKSED 559
Query: 363 AEERRLQPPKKEDRNRRRKKTATAEER--RPQPSKKEGAGREKTATA-EEGRLQPPMK 527
+ + +K++ ++ T ++R R KKE AGR + A + PP K
Sbjct: 560 EAPQPSESEEKDESEEHSEEETTKKKRGSRLSAGKKESAGRARNKKAVVAAKSSPPEK 617
Score = 30.7 bits (66), Expect = 2.7
Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +3
Query: 147 TAIAEE*KL-QSPKKEDCNRRRKKTA--IAEERRLQSPKK-EDCNRRRKKTAIAEERRLQ 314
T ++E+ K + K++ ++ TA + +R +S KK E+ + KK+ + +
Sbjct: 465 TTVSEKEKSSKGAKRKRTPKKTSPTAGSSSSKRSAKSQKKSEEATKVVKKSLAHSDDESE 524
Query: 315 SPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTAT 494
K+E+ + ++K EE++ ++E+ N K+ E+ PQPS+ E + +
Sbjct: 525 EEKEEEEKQEEEKAEEKEEKK----EEENENGIPDKS---EDEAPQPSESEEKDESEEHS 577
Query: 495 AEE 503
EE
Sbjct: 578 EEE 580
Score = 29.9 bits (64), Expect = 4.7
Identities = 21/98 (21%), Positives = 34/98 (34%)
Frame = +3
Query: 240 LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRK 419
++ +KED + K A + + K ED + + E+ KED
Sbjct: 212 VEGKEKEDKEENKTKEVEAAKAEVDESKVED-EKEGSEDENDNEKVESKDAKEDEKEETN 270
Query: 420 KTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED 533
E+ + SKK G G E +K+D
Sbjct: 271 DDKEDEKEESKGSKKRGKGTSSGGKVREKNKTEEVKKD 308
>At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00575: S1 RNA binding domain
Length = 1168
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +2
Query: 179 AEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDC 358
AEERR + + DR+RR +R + D +R R++ EE + +
Sbjct: 118 AEERRREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDRERNRGDEEGEDRRSDRRHR 177
Query: 359 NRRRKKTATAEERRPQPPKKED 424
R R E+RR K++
Sbjct: 178 ERGRGDGGEGEDRRRDRRAKDE 199
Score = 31.1 bits (67), Expect = 2.0
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRK 347
K + K+E +++ K AI + + +++ R AEERR + + D +RR+
Sbjct: 82 KSEKKKEEGDDQKFKGLAIKDTKDKVKELEKEIERE------AEERRREEDRNRDRDRRE 135
Query: 348 KKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPS--KKEGAGREKTATAEEGRLQPP 521
+R + DR+R R++ EE + S + GR E+ R
Sbjct: 136 SGRDRDRDRNRDRDDRRDRHRDRERNRGDEEGEDRRSDRRHRERGRGDGGEGEDRRRDRR 195
Query: 522 MKED 533
K++
Sbjct: 196 AKDE 199
>At2g39320.1 68415.m04827 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 189
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 314 IAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCN 493
+ ++ + KKE+ + RK E+++ + KK+D + KK A +++ + K+E N
Sbjct: 123 LQRKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKD--KEDKKKAKVQKEKKEKKEKKN 180
Query: 494 R 496
R
Sbjct: 181 R 181
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/62 (24%), Positives = 35/62 (56%)
Frame = +3
Query: 222 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKED 401
+ ++ ++ KKE+ + RK E+++ + KK+D + KK A ++ + + +K++
Sbjct: 123 LQRKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKD--KEDKKKAKVQKEKKEKKEKKN 180
Query: 402 RN 407
RN
Sbjct: 181 RN 182
Score = 30.3 bits (65), Expect = 3.5
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 186 KEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR--LQSPKKEDCNRRKKKTA 359
KE +R ++ A +LQ KKE N +KK +ER+ + KK+D +KK
Sbjct: 105 KEKGSRSSSSSSSAVWMKLQR-KKE--NEAKKKEEEEKERKDMEKEEKKKDKEDKKKDKE 161
Query: 360 TAEERRLQPPKKEDRNRRRK 419
++ ++Q KKE + ++ +
Sbjct: 162 DKKKAKVQKEKKEKKEKKNR 181
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 176 IAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKK 349
+ ++ ++ KKE+ + RK E+++ + KK+D +KK + +E++ + KK
Sbjct: 123 LQRKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKD-KEDKKKAKVQKEKKEKKEKK 179
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 31.9 bits (69), Expect = 1.2
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK 307
++ +E +T EE Q KE N + +K EE Q KE N + +K
Sbjct: 551 EASSQEESKENETETKEKEESSSQEETKEKENEKIEK----EESAPQEETKEKENEKIEK 606
Query: 308 TAIAEERRLQPPKKEDCNRRRKKTATAEER-RPQPPKKEDCNRRRKKT 448
A + + + E + + ++E + KKE KKT
Sbjct: 607 EESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKT 654
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/107 (19%), Positives = 45/107 (42%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTAT 362
+KE+ + + +EE ++ K ++ + EE ++ KK++ + + +
Sbjct: 212 RKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESEVEE-KKDNGSSEESEVEE 270
Query: 363 AEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEE 503
+E R +E + + + A EE R K + A E +EE
Sbjct: 271 KKENRGIDESEESKEKDIDEKANIEEARENNYKGDDASSEVVHESEE 317
Score = 29.1 bits (62), Expect = 8.2
Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 1/153 (0%)
Frame = +2
Query: 80 QSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEER 259
Q KE+ K+ S ++E + K EE Q KE N + +K A +
Sbjct: 555 QEESKENETETKEKEESSSQEETKEKENEKIE-KEESAPQEETKEKENEKIEKEESASQE 613
Query: 260 RLQSPKKEDCNRRRKKTAIAEER-RLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRR 436
+ + E + + ++E + KKE KKT + D ++
Sbjct: 614 ETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQK 673
Query: 437 RKKTATIEERRSWKREDCNRRRRKTATADERGL 535
+ + T E+ S K + + ++ ++ + L
Sbjct: 674 QSE-ETSEKEESNKNGETEVTQEQSDSSSDTNL 705
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 31.5 bits (68), Expect = 1.5
Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 15/203 (7%)
Frame = +2
Query: 176 IAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDC---NRRRKKTAIAEERRLQPPK 346
IA++ + + K + + +++ +R + KK D K A+ P
Sbjct: 247 IADQEKAKKRKSTPKRGKSGESSDTPAKRKRQTKKRDLPSDTEEGKDEGDADSEGTNDPH 306
Query: 347 KEDC-----NRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKT 511
+ED +KT T +E+ +K + K T+EE K +D + +
Sbjct: 307 EEDDAAPEEESDHEKTDTDDEKDEVEVEKPSKKKSSSK-KTVEESSGSKGKDKQPSAKGS 365
Query: 512 ATADERGLMMILVKSTGASKKE--DHL-----SRKKKTSVPXXXXXXXXXXXXGFSRLRA 670
A + E+ I ++ +KK+ DH+ KK+ S P + +A
Sbjct: 366 ARSGEKSSKQIAKSTSSPAKKQKVDHVESSKEKSKKQPSKPQAKGSKEKGKATKKGKAKA 425
Query: 671 KELEEKDYQVCRRSWKKXDYKLA 739
+ ++ +V + K+ D+ A
Sbjct: 426 EPTRKEMLEVVSKILKEVDFNTA 448
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/100 (20%), Positives = 44/100 (44%)
Frame = +3
Query: 168 KLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRK 347
++ SP KE+ + K+ E+ ++ SP+ + +K+ +E ++ + E + K
Sbjct: 12 EVNSPAKEEIDVVPKEEKEVEKEKVDSPRIGEAEEEKKE----DEEEGEAKEGELGEKDK 67
Query: 348 KKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 467
+ +EE + + K+T T RP +K+
Sbjct: 68 EDDVESEEEEEEEEGSGSKKSSEKETVTPTSERPTRERKK 107
Score = 29.9 bits (64), Expect = 4.7
Identities = 20/87 (22%), Positives = 36/87 (41%)
Frame = +3
Query: 240 LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRK 419
+ SP KE+ + K+ E+ ++ SP+ + KK+ E + ++D+ +
Sbjct: 13 VNSPAKEEIDVVPKEEKEVEKEKVDSPRIGEAEEEKKEDEEEGEAKEGELGEKDKEDDVE 72
Query: 420 KTATAEERRPQPSKKEGAGREKTATAE 500
EE SKK T T+E
Sbjct: 73 SEEEEEEEEGSGSKKSSEKETVTPTSE 99
>At5g52230.1 68418.m06483 expressed protein
Length = 746
Score = 31.5 bits (68), Expect = 1.5
Identities = 28/111 (25%), Positives = 47/111 (42%)
Frame = +3
Query: 198 NRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERR 377
N + +K ++ R Q PKKE + ++ +E+R +S +E N A +R
Sbjct: 213 NAKSEKDSVNSSVRSQKPKKEAVMKEEEEQDSSEKRITRSKVEEKKNELSNSVARRTSKR 272
Query: 378 LQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKE 530
L + E + + A+ +R P E KT T + R+ PP E
Sbjct: 273 LAGIELEPTPELKTR---AKVQRIVPLDDEPTPELKTRTKVQ-RVVPPDDE 319
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 31.5 bits (68), Expect = 1.5
Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 1/157 (0%)
Frame = +2
Query: 140 KENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIA 319
K+ +R +T E +K+ + + ++ +E KK+ + I
Sbjct: 93 KKKSKKRSKETKADSEAEDDGVEKKSKEKSKETKVDSEAHDGVKRKKKKSKKESGGDVIE 152
Query: 320 EERRLQPPKKEDCNRRRKKTAT-AEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNR 496
+ K+ R+R T AEE + K+++ ++ + +E+ D +
Sbjct: 153 NTESSKVSDKKKGKRKRDDTDLGAEENIDKEVKRKNNKKKPSVDSDVEDINLDSTNDGKK 212
Query: 497 RRRKTATADERGLMMILVKSTGASKKEDHLSRKKKTS 607
+R+K +++ + ST +KK +KKK S
Sbjct: 213 KRKKKKQSEDSETEENGLNSTKDAKKRRKKKKKKKQS 249
>At5g23890.1 68418.m02806 expressed protein weak similarity to
SP|P12957 Caldesmon (CDM) {Gallus gallus}
Length = 946
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 643 KKRVFKIAGEGAGR-KRLSSLQKELEERXLQACGRRSWKKKTIKLAEEAG 789
K+RVF + E +R+S LQ ELE RSW ++ K A E G
Sbjct: 749 KERVFNLRKEAEEESQRISKLQYELEVERKALSMARSWAEEEAKKAREQG 798
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 31.5 bits (68), Expect = 1.5
Identities = 32/162 (19%), Positives = 68/162 (41%), Gaps = 7/162 (4%)
Frame = +2
Query: 65 SARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTA 244
+A L KE+ ++++ Q+ + N + A AE L+ + +
Sbjct: 283 AAENLSKKAKEENHKVRDILKQAINEANVAKEAAGIARAENSNLKDALLDKEEELQFALK 342
Query: 245 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRR----RKKTATAEERRPQPP 412
E ++ D ++ KK E ++ K+ NR+ ++ E++ +
Sbjct: 343 EIERVKVNEAVANDNIKKLKKMLSEIEVAMEEEKQRSLNRQESMPKEVVEVVEKKIEEKE 402
Query: 413 KKEDC--NRRRKKTATIEERR-SWKREDCNRRRRKTATADER 529
KKE+ N++ KK + E++ S K+ED ++ + D+R
Sbjct: 403 KKEEKKENKKEKKESKKEKKEHSEKKEDKEKKEQTHQNFDKR 444
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 31.5 bits (68), Expect = 1.5
Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +3
Query: 174 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKK--EDCNRRK 347
+S E+ N + +A++ L S + ++ + +ERR +S + E NR
Sbjct: 714 RSRSLENDNGSHENVDVAQDNDLNSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSS 773
Query: 348 KKTATAEERRLQPPKKEDRNR--RRKKTATAEERRPQPSKKEGAGREKTATAEEGR 509
+K E+R ++ R++ K++ E R K +GR + + EG+
Sbjct: 774 RKNKLDEDRNTGSRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGRRSRSPSSEGK 829
>At2g24440.1 68415.m02921 expressed protein
Length = 183
Score = 31.5 bits (68), Expect = 1.5
Identities = 25/102 (24%), Positives = 51/102 (50%)
Frame = +2
Query: 173 AIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKE 352
AIA R L+S ++ R+ ++ + ++ +++SP+K+ + K A ++++ KKE
Sbjct: 14 AIANTRMLRSMDRKTRSDTKRDGSSSKLMKIESPEKKKRKTTKAKNVGAAKKKV---KKE 70
Query: 353 DCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWK 478
+ + +K EE +KE+ + KK IE + K
Sbjct: 71 EVAVKIEK---EEEEDDDAAEKEEDDDSDKKKIVIEHCKQCK 109
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +2
Query: 104 NRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 283
N + + L++P+K + R K RR PK+E + R +K+ + + + ++PK++
Sbjct: 104 NNVAEQILKTPEKPKRKKHRPKV-----RREAKPKREPKPRAPRKSVVTDGQESKTPKRK 158
Query: 284 DCNRRRKKTAIAEERRLQP 340
RKK +++++ P
Sbjct: 159 YV---RKKVEVSKDQDATP 174
>At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q9P6R9 Cell
cycle control protein cwf22 {Schizosaccharomyces pombe};
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 900
Score = 31.1 bits (67), Expect = 2.0
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEERRLQSPKKEDCN---------RRRKKTAIAEERRLQSPKKEDC 335
K + +R R T+ EE L+ KKE RRR + ++ R +S +
Sbjct: 122 KGRNTDRVRADTSSDEEDDLKGNKKEPMEVDDDYGRRGRRRSPKVMEKQGRERSHRGSRV 181
Query: 336 NRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQ 515
K + +R + ++E + +RR A+ ++ + + E G+EK EG L+
Sbjct: 182 IADKPSDEEDDRQRSRGGRRESQRKRRDHRASDDDEEGE-IRSERRGKEKNDRGSEGLLK 240
Query: 516 PPMKE 530
+E
Sbjct: 241 RDRRE 245
>At5g53930.1 68418.m06710 expressed protein
Length = 529
Score = 30.7 bits (66), Expect = 2.7
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Frame = +2
Query: 65 SARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTA 244
S+ L+S KK+ R K ++ K E+ + + + KK+ R++ KK +
Sbjct: 14 SSNKLRSVKKKKSKRNKSKKIRRIKDESESSGSDSSLYSSSEDDYRRKKKRRSKLSKKRS 73
Query: 245 IAEERRLQSPKKEDCNR--RRKKTAIAEERRLQPPKKEDCNRRRKK-----TATAEERRP 403
+S D +R ++KK + ++ + KK+ +R+R+K ++T+ E+
Sbjct: 74 RKRYSSSESDDDSDDDRLLKKKKRSKRKDENVGKKKKKVVSRKRRKRDLSSSSTSSEQSD 133
Query: 404 QPPKKEDCNRRRKKTATIEERRSWKREDCNRRRR 505
+ D +R + RR K +D R R
Sbjct: 134 NDGSESDDGKRWSRD---RGRRLGKVKDSRSRSR 164
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 30.7 bits (66), Expect = 2.7
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Frame = +2
Query: 197 QSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT-AIAEERRLQPPKKED------ 355
+ KED R+RKK++ + + ED ++KK+ + +++ KKE+
Sbjct: 290 EEQSKED--RKRKKSSKRNKSEEEEVNNEDHKSKKKKSKSNTNVDQVETKKKEEHKEKTI 347
Query: 356 -CNRRRKKTATAEERRPQPPKKEDC-NRRRKKTATIEERRSW-KREDCNRRRRKTATADE 526
N A +++R P ++ D + A I R + K + ++K ++ E
Sbjct: 348 PSNNDDDDDAEKKQKRATPKEELDAIDDAETSFAEIFSRENVPKGSEDGIEKKKKSSVQE 407
Query: 527 RGLMMILVKSTGASKKEDHLSRKKKTSV 610
GL+ ++ T A+KK+ +K+ SV
Sbjct: 408 TGLVKVI--DTKANKKKKKSEKKQSKSV 433
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 30.7 bits (66), Expect = 2.7
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +3
Query: 288 AIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 467
++AEE QS K+ N++KK+++T E ++P ++ T+E PQ +KK
Sbjct: 438 SMAEELPEQSVPKKTANQKKKESSTEE---VKPSASIATEEVSEEPNTSE---PQVTKK- 490
Query: 468 GAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLEKKKQAC--REERGLPGSG 641
+G++ ++++ PP K+ + ++ KK+ + +++ +EE+ PG G
Sbjct: 491 -SGKKVASSSKTKPTVPPSKKS--TSETKVAKQSEKKVVGSDNAQESTKPKEEKKKPGRG 547
Query: 642 K 644
K
Sbjct: 548 K 548
>At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)
identical to cDNA DEAD box RNA helicase, RH28 GI:3776026
Length = 789
Score = 30.7 bits (66), Expect = 2.7
Identities = 25/127 (19%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Frame = +2
Query: 161 RMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQP 340
+MK ER P+K+ R + + + + + E+ + +R ++ ++++ +
Sbjct: 636 KMKEKRKREREKNLPRKKRRKLEAAREMLEDNEGEEEEEDEEGDEKRGRSRGKDKKKQET 695
Query: 341 PKK----EDCNRRRKKTATAEER--------RPQPPKKEDCNRRRKKTATIEERRSWKRE 484
KK +D R K A++R RP+P KK+ ++ R + EE + +
Sbjct: 696 DKKGLTLKDLGYMRAKAVKAKQRAIDSGKMERPKPDKKQSRSKPRNQPRG-EEMKDLFKS 754
Query: 485 DCNRRRR 505
D +++
Sbjct: 755 DMGEKKQ 761
>At4g13540.1 68417.m02111 expressed protein
Length = 210
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 131 SPKKENCNRRRMKTAIAEERRLQSPKKEDRNRR---RKKTAIAEERRLQSPKKEDCNRRR 301
S + N ++RR+K E+RR ++ ++ D R K A E R+ + +E+ R R
Sbjct: 6 SKDERNSSKRRIKVKANEQRRRETRRELDEKERVILALKMAETEWRKERKRLREEVKRLR 65
Query: 302 KKTAIAEE 325
+K EE
Sbjct: 66 QKMEEKEE 73
>At3g12860.1 68416.m01603 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 499
Score = 30.7 bits (66), Expect = 2.7
Identities = 16/70 (22%), Positives = 37/70 (52%)
Frame = +3
Query: 231 ERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRNR 410
E++ + K D + ++KK E+ + K+E+ +++KKK + A E ++
Sbjct: 432 EKKDEGEKTVDASEKKKKRKTEEK---EEEKEEEKSKKKKKKSKAVEGEELTATDNGHSK 488
Query: 411 RRKKTATAEE 440
++KKT + ++
Sbjct: 489 KKKKTKSQDD 498
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/119 (23%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Frame = +2
Query: 137 KKENCNRRRMKTAIAEERRLQSP-----KKEDRNRRRKKTAIAEERRLQSPKKEDCNRRR 301
+KEN ++ +K E R+++ +K+ R +RK+ AE+++ + K + ++
Sbjct: 282 EKENA-KKTVKARKEEHARIRTLVDNAYRKDPRIVKRKEEEKAEKQQKKDAKIQAKKKQE 340
Query: 302 KKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKK---EDCNRRRKKTATIEERR 469
+ AIA E + +KE+ +R ++A +++ + KK ++ NR R +A + +R
Sbjct: 341 EDAAIAAEE--EKRRKEEEEKRAAESAQQQKKTKEREKKLLRKERNRLRTLSAPLVAQR 397
>At2g45590.1 68415.m05669 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 683
Score = 30.7 bits (66), Expect = 2.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Frame = +2
Query: 428 NRRRKKTATIEERRSWKREDC---NRRRRKTATADERGLMMI------LVKSTGASKKED 580
++++KK + R WK E C R++RK +RGL I + GAS D
Sbjct: 425 SKKKKKEKKRKPREWWKEEFCEELTRKKRKKKKKKKRGLSSISSIDSWFHRDDGASSVHD 484
Query: 581 H----LSRKKKTSV 610
H RKK+ S+
Sbjct: 485 HNLNPTKRKKRNSI 498
>At2g25120.1 68415.m03005 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 380
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 347 KEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDC 490
KE ++RK+ EE+ + KK DC + + T E +WK EDC
Sbjct: 22 KETEKKQRKRKKDCEEKNKKKRKK-DCEEKHE---TKEMELAWKPEDC 65
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/87 (21%), Positives = 36/87 (41%)
Frame = +3
Query: 228 EERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDRN 407
EERR + + D R R++ + R + ++E R ++ ERR + + E
Sbjct: 358 EERRREDQRARDKEREREREREHDRERERQRERERQRARDRERERILERREKERQGERER 417
Query: 408 RRRKKTATAEERRPQPSKKEGAGREKT 488
R++ +R P +E+T
Sbjct: 418 ERKRALEIKRDRTPTARATSKDTKERT 444
>At1g24706.1 68414.m03104 expressed protein
Length = 1781
Score = 30.7 bits (66), Expect = 2.7
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +2
Query: 140 KENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIA 319
KE+ RR +RL SP+ E+R +RR + ++ +++D R RK+
Sbjct: 1595 KEDLERRA--GGARHSQRL-SPRHEEREKRRSEENLSVSVDDAKRRRDDDIRDRKR---- 1647
Query: 320 EERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED--CNRRRK 442
++R K E+ R R++ ER P KED ++RRK
Sbjct: 1648 DDRETITVKGEERERERER---EREREKSLPLKEDFEASKRRK 1687
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/109 (25%), Positives = 54/109 (49%)
Frame = +2
Query: 185 ERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNR 364
E+ L K +RK+ ++ ++R + KE R++ T I + + LQ +
Sbjct: 1045 EKDLPFMSKPKNIPKRKRPSLEDKRAVIMEPKE----RKEHTIIQQFQLLQH------HT 1094
Query: 365 RRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKT 511
+KK AT +++R + ++ N K EERR RE+ +++++KT
Sbjct: 1095 MKKKKATDQKKRKEYEAEKAKNEEINKKRRREERRDRYREE-DKQKKKT 1142
>At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /
CAF identical to RNA helicase/RNAseIII CAF protein
GB:AAF03534 GI:6102610 from [Arabidopsis thaliana]
Length = 1909
Score = 30.7 bits (66), Expect = 2.7
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 6/147 (4%)
Frame = +2
Query: 149 CNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEER 328
C+ + ++ ++ + + ++ DR RK+T +E + KK +CN R+ E R
Sbjct: 130 CSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAG-NNKKKRECNNYRRDGRDREVR 188
Query: 329 RLQPPKKEDCNRRRKKTATAEERRPQPPKK-----EDCN-RRRKKTATIEERRSWKREDC 490
K N ++ T E + KK +C+ + + + EER+ E+
Sbjct: 189 GYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEENKSKPEERKEKVVEEQ 248
Query: 491 NRRRRKTATADERGLMMILVKSTGASK 571
RR + + I TGA K
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGK 275
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/128 (17%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +3
Query: 162 E*KLQSPKKEDCNRRRKKTAIAEERRL----QSPKKEDCNRRRKKTAIAEERRLQSPKKE 329
E K + K++D N+ K + ++ ++P+K D + ++ + + KE
Sbjct: 282 EEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVKE 341
Query: 330 DCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGR 509
+ R ++ +E+ + +KE K+ +E + + ++E A +K + +
Sbjct: 342 EGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEESAEGKKKEVVKGKK 401
Query: 510 LQPPMKED 533
P D
Sbjct: 402 ESPSAYND 409
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 30.3 bits (65), Expect = 3.5
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Frame = +3
Query: 183 KKEDCNRRRKKTAIAEE-----RRLQ--SPKKEDCNRRR-KKTAIAEERRLQSPKKEDCN 338
+KE+ ++ K + EE R+LQ + KE+ R+ ++ A A+E +E+
Sbjct: 142 EKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEEIE 201
Query: 339 RRKK-KTATAEERRLQPPKKED-RNRRRKKTATAEERR--PQPSKKEGAGREKTATAEEG 506
++K + EERRL+ K ED + K +ER+ + +KE + + + G
Sbjct: 202 AKEKLEERKLEERRLEERKLEDMKLAEEAKLKKIQERKSVDESGEKEKILKPEVVYTKSG 261
Query: 507 RLQPPMKE 530
+ P E
Sbjct: 262 HVATPKPE 269
>At4g16680.1 68417.m02519 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 883
Score = 30.3 bits (65), Expect = 3.5
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 8/157 (5%)
Frame = +2
Query: 83 SPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERR 262
S +K C PKK + RRR+ ++ EE + K + K + E R
Sbjct: 25 SVEKTTCRLPVSIKFNIPKKISTKRRRI--SVEEEEEEEDENKTKLSSWEKVLSSDEILR 82
Query: 263 LQ--SPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEE------RRPQPPKK 418
L+ S +K +R KK EE R + +D R A +E +R K+
Sbjct: 83 LREVSRRKYLTDRENKKV---EELRDERKDDDDVEGYRFPDAYDQEGCIDQKKRFDVAKE 139
Query: 419 EDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 529
C RRR + E+ +W+ + R + D++
Sbjct: 140 RYCERRRSGRV-VTEQEAWEDHQAQKARVRFGAKDKK 175
>At3g18990.1 68416.m02410 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 341
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +3
Query: 222 IAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKED 401
+ E +PK R+KK A EE +P+ +D R K +A R+ + E+
Sbjct: 168 VKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARK-RTVTAEE 226
Query: 402 RNRRRKKTATAEERRP 449
R R T E P
Sbjct: 227 RERAINAAKTFEPTNP 242
>At2g35880.1 68415.m04405 expressed protein
Length = 432
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +2
Query: 59 GXSARXLQSPKKEDCNRMKKX*LQSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKK 238
G +A + PK + +KK +S K + +K A ++++++ + E R K
Sbjct: 342 GEAAPRVTKPKDSSSSTVKKPITKSQPKLETQEKSVK-AKEKKKKVKKEEAEKRGEEEKA 400
Query: 239 TAIAEERRLQSPKKED 286
TA+A + Q P +
Sbjct: 401 TAVAAKPEEQKPNSNN 416
>At2g35670.1 68415.m04375 transcription factor, putative /
fertilization-independent seed 2 protein (FIS2)
identical to GB:AF096095
Length = 632
Score = 30.3 bits (65), Expect = 3.5
Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +2
Query: 134 PKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTA 313
P+ + + T + ++ + SP + + + T + E+ + SP K +++ + T
Sbjct: 171 PRAHSSAEKNESTHVNDDDDVSSPPRAHSLEKNESTHVNEDN-ISSPPKAHSSKKNESTH 229
Query: 314 IAEERRLQPPKKEDCNRRRKKTATAEER--RPQPPKKEDCNRRRK 442
+ +E PP+ T + P PK +RR++
Sbjct: 230 MNDEDVSFPPRTRSSKETSDILTTTQPAIVEPSEPKVRRVSRRKQ 274
>At1g15200.1 68414.m01817 protein-protein interaction regulator
family protein contains Pfam PF04696: pinin/SDK/memA/
protein conserved region
Length = 423
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/91 (23%), Positives = 38/91 (41%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK 307
+ PK N NRR + + L+ +KED+ +R A A +E ++
Sbjct: 155 EDPKLVNRNRRMLGNLLG---TLEKFRKEDK-QRSGTDAYARRTAALQRAEEKAREESER 210
Query: 308 TAIAEERRLQPPKKEDCNRRRKKTATAEERR 400
+ E L ++ D R + A AE+++
Sbjct: 211 LRLQERENLTEKRRRDLTLRARVAAKAEQKK 241
>At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 357
Score = 29.9 bits (64), Expect = 4.7
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Frame = +3
Query: 192 DCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEER--RLQSPKKEDCNRRKKKTATA 365
D R R+ + + RL K D +RRR++ A E R +SP+K R
Sbjct: 222 DYGRGRRSPSPYKRARLSPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSPPPYEK 280
Query: 366 EERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRL 512
PP E R R + E+RR + + + E G++
Sbjct: 281 RRESRSPPPYEKR-RESRSPPPYEKRRERSRSRSKSSPENGQVESPGQI 328
>At5g52040.1 68418.m06458 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 356
Score = 29.9 bits (64), Expect = 4.7
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Frame = +3
Query: 192 DCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEER--RLQSPKKEDCNRRKKKTATA 365
D R R+ + + RL K D +RRR++ A E R +SP+K R
Sbjct: 222 DYGRGRRSPSPYKRARLSPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSPPPYEK 280
Query: 366 EERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRL 512
PP E R R + E+RR + + + E G++
Sbjct: 281 RRESRSPPPYEKR-RESRSPPPYEKRRERSRSRSKSSPENGQVESPGQI 328
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 29.9 bits (64), Expect = 4.7
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +3
Query: 327 EDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEG 506
+D + KK E+R + K +DR++ ++K ++ + + K + G+EK EE
Sbjct: 12 QDKYKEKKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDKHKDQKDKEKGKEKGKPLEEK 71
Query: 507 RLQ 515
+ +
Sbjct: 72 KAE 74
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 29.9 bits (64), Expect = 4.7
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = +2
Query: 182 EERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIA-EERRLQPPKKEDC 358
EE L + E ++ + +IA+ + QS K+ A+ R+ +
Sbjct: 206 EEEELAFHEDEMARNKQIQASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRR 265
Query: 359 NRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADE 526
N R + A E ++ NR R K ++ +ER + R+ RR+R T+ + +
Sbjct: 266 NSRNMEQQNASEAHEDDDNDDNNNRGRDKDSSSDERGTEVRQK-KRRKRSTSRSTQ 320
Score = 29.9 bits (64), Expect = 4.7
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +2
Query: 143 ENCNRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAE 322
E ++++ +IA+ + QS R K+ A+ ++SP+ +RRR+ + E
Sbjct: 216 EMARNKQIQASIAQISQRQSEALVKRRSLGKEAAVL----MRSPRIASGSRRRRNSRNME 271
Query: 323 ERRLQPPKKED-----CNRRRKKTATAEERRPQPPKKEDCNRRRKKTA 451
++ ++D NR R K ++++ER + +K+ RR++ T+
Sbjct: 272 QQNASEAHEDDDNDDNNNRGRDKDSSSDERGTEVRQKK---RRKRSTS 316
>At5g19300.1 68418.m02300 expressed protein contains Pfam profile
PF02598: Uncharacterized ACR, COG2106
Length = 398
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +3
Query: 315 SPKKEDCNRRKKKTATAE-----ERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGR 479
S KK++ N++K+ E + L KE++ ++++K EE ++K
Sbjct: 28 SKKKKNKNKKKRSHEDTEIEPEQKMSLDGDSKEEKIKKKRKNKNQEEEPELVTEKTKVQE 87
Query: 480 EKTATAEEGR 509
E+ EEGR
Sbjct: 88 EEKGNVEEGR 97
>At5g14460.1 68418.m01692 pseudouridylate synthase TruB family
protein similar to SP|P09171 tRNA pseudouridine synthase
B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase)
(Pseudouridylate synthase) (Uracil hydrolyase)
{Escherichia coli O157:H7}; contains Pfam profile
PF01509: TruB family pseudouridylate synthase (N
terminal domain)
Length = 540
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 600 KQACREERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRKXTTSLRKKE 749
K A E+G PGSG E D +R + K K G+ + TS RK +
Sbjct: 97 KLAMEREQGRPGSGDPE--MDKAKRKYYSKRRKRLYGSDSEDETSSRKSD 144
>At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1004
Score = 29.9 bits (64), Expect = 4.7
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Frame = +1
Query: 187 KKTAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDC-NXXXXXXXXXXXXXLQP 363
++T + E++ QSPKKE+ + + ++E+ P++E C L
Sbjct: 564 QETEQSVEKQKQSPKKEEMEQYLSRD-MSEQVTKSLPEEEQCVQEYGAYDKLEAQDVLTI 622
Query: 364 PKKEDCNRRRKKTATAEERRLQPPKKED-RNHXXXXXXXXXXXQPPKKEDC 513
K E+ + + + ++ KKED + + PP+ E C
Sbjct: 623 NKLEESQQTEQSVEKEDTKKNLSSKKEDLKQNLSMDQSEQLYKSPPEDEKC 673
>At4g10790.1 68417.m01759 UBX domain-containing protein low
similarity to SP|Q9UNN5 FAS-associated factor 1 (FAF1
protein) {Homo sapiens}; contains Pfam profile PF00789:
UBX domain
Length = 480
Score = 29.9 bits (64), Expect = 4.7
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 225 AEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEERRLQPPKKEDR 404
AEERR +E+ + + A++ R Q ++E R ++ A ER+L KE+
Sbjct: 312 AEERRTNLRLREEQDAAYRAALEADQAREQQRQEE--KERLEREAAEAERKL----KEEE 365
Query: 405 NRRRKKTATAEERR 446
R + AEER+
Sbjct: 366 EARERAAREAEERQ 379
>At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 29.9 bits (64), Expect = 4.7
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 344 KKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRS-WKREDCNR---RRRKT 511
KK D R K+T R+ Q ++ N RKK AT+E++ + KRE+ + +R K
Sbjct: 590 KKADTLERLKETL----RKKQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKL 645
Query: 512 ATADERGLMMILVKSTGASKKE 577
TA + G + K+ ++ K+
Sbjct: 646 DTASDSGAAIASPKTESSTDKK 667
>At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 29.9 bits (64), Expect = 4.7
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 344 KKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRS-WKREDCNR---RRRKT 511
KK D R K+T R+ Q ++ N RKK AT+E++ + KRE+ + +R K
Sbjct: 590 KKADTLERLKETL----RKKQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKL 645
Query: 512 ATADERGLMMILVKSTGASKKE 577
TA + G + K+ ++ K+
Sbjct: 646 DTASDSGAAIASPKTESSTDKK 667
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 225 AEERRLQSPKKEDCNRRRKKTAIAE 299
+EE RLQ+P CN R+K+ A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 248 AEERRLQSPKKEDCNRRRKKTAIAE 322
+EE RLQ+P CN R+K+ A+A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 294 AEERRLQSPKKEDCNRRKKKTATAE 368
+EE RLQ+P CN RKK+ A A+
Sbjct: 62 SEETRLQTPAVLTCNDRKKEVAVAQ 86
>At1g11950.1 68414.m01381 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain; non-consensus TG acceptor splice site at
exon boundary 79262
Length = 880
Score = 29.9 bits (64), Expect = 4.7
Identities = 23/99 (23%), Positives = 45/99 (45%)
Frame = +2
Query: 314 IAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCN 493
I EE ++ PK+ N+RRK+ + A+E + + +K C+ K +++RS ++
Sbjct: 45 IEEEISVECPKRV-ANQRRKR-SKADEIKTKSSRKRKCDDENKCEENEKKQRSSVKKRAT 102
Query: 494 RRRRKTATADERGLMMILVKSTGASKKEDHLSRKKKTSV 610
+ + D+ ++ +SK KK SV
Sbjct: 103 TWKEEEVVVDDEKKCEQQLQLVPSSKATSRSRSKKSVSV 141
>At5g63530.1 68418.m07974 copper chaperone (CCH)-related low
similarity to copper homeostasis factor [GI:3168840];
nearly identical to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 355
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +3
Query: 345 KKKTATAEERRLQPPKKEDRNRRRKKTATAE------ERRPQPSKKEGAGREKTATAEEG 506
+KK AEE++++ K E++ K AE +++PQ + +E +A A
Sbjct: 5 EKKPEAAEEKKMEEKKPEEKKEGEDKKVDAEKKGEDSDKKPQEGESNKDSKEDSAPAAPE 64
Query: 507 RLQPP 521
PP
Sbjct: 65 APAPP 69
>At5g59460.1 68418.m07452 scarecrow-like transcription factor 11
(SCL11) identical to cDNA scarecrow-like 11 (SCL11)
mRNA, partial cds gi:4580526
Length = 172
Score = 29.5 bits (63), Expect = 6.2
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 315 SPKKEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSK 461
+P N KK + E +++P + D + +RK++ E + +P+K
Sbjct: 85 NPSSSSSNGGKKSFSEPESSKVEPSGETDGDLKRKQSEVVSEEQNRPNK 133
>At5g57710.1 68418.m07214 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 990
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 152 NRRRMKTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKE 283
N +++ +E RL+ +E +RR ++E RL PKKE
Sbjct: 778 NEAKLRDLASESWRLRLCMREKFGKRRASWLCSDEERLTKPKKE 821
>At5g42540.1 68418.m05178 5'-3' exoribonuclease (XRN2) identical to
XRN2 [Arabidopsis thaliana] GI:11875630; contains Pfam
domain PF03159: Putative 5'-3' exonuclease domain
Length = 1012
Score = 29.5 bits (63), Expect = 6.2
Identities = 27/108 (25%), Positives = 55/108 (50%)
Frame = +3
Query: 177 SPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKT 356
+PKK + +R+K A ++ QS +K + K + ++ +SP++E +KK+
Sbjct: 905 TPKKMNSPQRQK--AWKKDETPQSREKSKKLKSSLKVNPLKMKKTKSPQREFTREKKKEN 962
Query: 357 ATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAE 500
T +R+L +++ ++ R + A ++R KKE R+K A+
Sbjct: 963 IT-PQRKLTKAQRQVKHIRMMEEAKMIKQR----KKEKYLRKKAKYAQ 1005
>At3g58050.1 68416.m06471 expressed protein
Length = 1209
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/88 (21%), Positives = 43/88 (48%)
Frame = +2
Query: 167 KTAIAEERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPK 346
K I E++++ ++E++ +R + EER+ + KE + RKK + E+ + + K
Sbjct: 520 KEIITLEKQVKLLEEEEKEKREE-----EERKEKKRSKEREKKLRKKERLKEKDKGKEKK 574
Query: 347 KEDCNRRRKKTATAEERRPQPPKKEDCN 430
+C+ + ++ E P ++ N
Sbjct: 575 NPECSDKDMLLNSSREEEDLPNLYDETN 602
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 336 NRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQ--PSKKEGAGREKTATAEEGR 509
++ +KK E P + + +++KK T +E +PQ P K++ G T EE
Sbjct: 389 HKSRKKNKENSEHDSTPHESNGKTKKKKKKKTHKEEQPQTSPRKRKHRGGWITEEPEEES 448
Query: 510 LQ 515
Q
Sbjct: 449 FQ 450
>At1g53260.1 68414.m06035 hypothetical protein low similarity to
SP|Q38732 DAG protein, chloroplast precursor
{Antirrhinum majus}
Length = 358
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 387 PKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRLQPP 521
PK + R AT E RRP+ + GR + G +PP
Sbjct: 150 PKYHEEWIRNNANATNENRRPRRPRNSDGGRNDRGNQDTGYRRPP 194
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 29.1 bits (62), Expect = 8.2
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +3
Query: 183 KKEDCNRRRKKT------AIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRR 344
KK+ N++R T A+AEE + KK ++R T E+ + ++E+ ++
Sbjct: 62 KKKKKNKKRGDTDDGEDEAVAEEEPKKKKKKNKKLQQRGDTNDEEDEVIA--EEEEPKKK 119
Query: 345 KKKTATAEERRLQPPKKEDRNRRRKKTATA 434
KKK E + + + ED+ +K T+
Sbjct: 120 KKKQRKDTEAKSEEEEVEDKEEEKKLEETS 149
>At5g54910.1 68418.m06839 DEAD/DEAH box helicase, putative
Length = 739
Score = 29.1 bits (62), Expect = 8.2
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 420 KTATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLEKK 599
+ A EER KK GA K A E+ ++ + + ++++ ++K +E +
Sbjct: 627 EVALDEERMNDYYKKVGAEMRK-ADIEDKKVDKERRREK-----RMKQKIKRKRGAMEDE 680
Query: 600 KQACREERGLPGSGKKEGFQDCGRRSWKKKTIKS--AEGAGRKXTTSLRKKELEE 758
++ EE GSG + + GR S + K I S E G+ T SL +LEE
Sbjct: 681 EE--EEEEDHDGSGSSD--DETGRNSKRAKKIVSDNEENGGKINTDSLSVADLEE 731
>At5g36740.1 68418.m04402 PHD finger family protein
Length = 1179
Score = 29.1 bits (62), Expect = 8.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 476 KREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKKT 604
KR D ++R K D ++ + K TG K+E+ SRK+ T
Sbjct: 478 KRSDTGKQRSKLKDRDTNDIL-VSTKGTGKIKREEKHSRKRCT 519
>At5g36670.1 68418.m04388 PHD finger family protein
Length = 1193
Score = 29.1 bits (62), Expect = 8.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 476 KREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKKT 604
KR D ++R K D ++ + K TG K+E+ SRK+ T
Sbjct: 478 KRSDTGKQRSKLKDRDTNDIL-VSTKGTGKIKREEKHSRKRCT 519
>At5g10250.1 68418.m01190 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 607
Score = 29.1 bits (62), Expect = 8.2
Identities = 18/87 (20%), Positives = 41/87 (47%)
Frame = +2
Query: 338 PPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTAT 517
P K+E+ + R+ + + KE+ +KK + ++ + +++ R K +
Sbjct: 501 PEKEEENSGGREDKRMSRDNEIIKTLKEELENVKKKMSELQSDYNELQQEYERLSSKQKS 560
Query: 518 ADERGLMMILVKSTGASKKEDHLSRKK 598
+ GL VK + +K+ED +R++
Sbjct: 561 SHNWGLRWQKVKKSFQTKREDEETRER 587
>At4g36700.1 68417.m05208 cupin family protein low similarity to
preproMP27-MP32 from Cucurbita cv. Kurokawa Amakuri
[GI:691752]; contains Pfam profile PF00190: Cupin
Length = 522
Score = 29.1 bits (62), Expect = 8.2
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 275 KKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRP--QPPKKEDCNRRR 439
KK D R+R+ +E + K+E+ RR+++ ++R P QPP++E+ R+
Sbjct: 453 KKIDDERKRRHDERKKEE--EEAKREEEERRKREEEEEKKRWPPQQPPQEEELRERQ 507
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 276 RKKTAIAEERRLQSPKKEDCNRRKKKTAT-AEERRLQPPKKEDRNRRRKKTA----TAEE 440
RK+ IA+ ++ KK+ + K A A++ + KKE + +KKT T E
Sbjct: 475 RKQEEIAKAKQAMERKKKLAEKAAAKAAIRAQKEAEKKEKKEQEKKAKKKTGGNTETETE 534
Query: 441 RRPQPSKKE 467
P+ S++E
Sbjct: 535 EVPEASEEE 543
>At3g57300.1 68416.m06378 transcriptional activator, putative similar
to transcriptional activator SRCAP [Homo sapiens]
GI:5106572; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1507
Score = 29.1 bits (62), Expect = 8.2
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +2
Query: 188 RRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRR 367
R L K+ + ++ K+ I E + ED +R+ EE P K + N++
Sbjct: 1388 RELPLQVKDRQKKKTKRIRIDAEGDATLEELEDVDRQDNGQEPLEE----PEKPKSSNKK 1443
Query: 368 RKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWK 478
R+ + + R PQ KE+ N T +R K
Sbjct: 1444 RRAASNPKARAPQKA-KEEANGEDTPQRTKRVKRQTK 1479
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 29.1 bits (62), Expect = 8.2
Identities = 27/109 (24%), Positives = 43/109 (39%)
Frame = +2
Query: 182 EERRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCN 361
EE Q ++ R K+ + E ++ E RR K + ER + ++ + +
Sbjct: 242 EENDRQYSREVLERDRSKERDMDREGSIRDRDSEGSKRRDKDSDRRREREREKRREIESD 301
Query: 362 RRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRK 508
R R+K E + +KE + A E RS R N R RK
Sbjct: 302 RERRKEKERERSIDRDRRKEREGDYLRDRAN-ERGRSRDRTRYNSRERK 349
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 29.1 bits (62), Expect = 8.2
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Frame = +2
Query: 239 TAIAEERRLQSPKKEDCNRRRKKTAIAEERR-------LQPPKKEDCNRRRKKTATAEER 397
T+ E R ++S K+ ++ R + + +ER LQ + E R+ +K E R
Sbjct: 5 TSKQERRGVRSVKETSKDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKERKKLREEVR 64
Query: 398 RPQPPKKEDCNRRRKKTATIEERRSWK---REDCNRRRRKTATADERGLMMILVKS 556
R + +E R KT T EER WK E C R + ++ + + +K+
Sbjct: 65 RLRKKLEE---REEAKTTTTEEREYWKWVVEEMCVERAVRDEAVEKWKQLYLAIKN 117
>At2g30960.1 68415.m03776 expressed protein
Length = 260
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 198 NRRRKKTAIAEERR--LQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKKTATAEE 371
N + KK EERR LQ+ +++ K A EE+R+ ++ R+K+ E
Sbjct: 35 NEKEKKRKEEEERRRKLQAEEEKKIEEEDLKKA-EEEKRMNRSNRKHFGRKKESIDGGEA 93
Query: 372 RRLQPPKKE 398
R ++ K E
Sbjct: 94 RFVEKEKPE 102
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 29.1 bits (62), Expect = 8.2
Identities = 23/103 (22%), Positives = 45/103 (43%)
Frame = +3
Query: 174 QSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRKKK 353
++PK R R +E+ + +SP +R+ + + RR +ED ++K
Sbjct: 388 ETPKHNSHERER-----SEKIQRRSPHGNGEGKRQHRDERDDGRRQHD--REDARELERK 440
Query: 354 TATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGRE 482
+ER + + R RRR+++ E RR + + R+
Sbjct: 441 HRERKERESREDEDRRRRRRREESRDKESRRERDEDDHRSHRD 483
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 4/126 (3%)
Frame = +2
Query: 128 QSPKKENCNRRRMKTAIAEERR---LQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRR 298
Q+ K+ +T A +R+ + K +R R+ + + + ++ K+ ++R
Sbjct: 371 QTSSKDKDANESAETLKARDRKSLGADTSSKMNRTRKDEMNITDDSNKRRNYNKQARDKR 430
Query: 299 RKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPK-KEDCNRRRKKTATIEERRSW 475
K A E+RLQ K+ N + + K ED ++RRK + E
Sbjct: 431 LKYMKQAREKRLQYIKQARKNGNNESGSKVNRTSKDGMKIAEDFDKRRKYMKRVRENNES 490
Query: 476 KREDCN 493
C+
Sbjct: 491 HMGQCH 496
>At1g04850.1 68414.m00481 ubiquitin-associated (UBA)/TS-N
domain-containing protein weak similarity to SP|P45974
Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)
{Homo sapiens}; contains Pfam profile PF00627: UBA/TS-N
domain
Length = 413
Score = 29.1 bits (62), Expect = 8.2
Identities = 22/108 (20%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +2
Query: 161 RMKTAIAEERRLQSPKKEDRN--RRRKKTAIAEERRLQSPKK-EDCNRRRKKTAIAEERR 331
++K ER + ++E++ R R+K I + L K+ E+ N R++ + + +
Sbjct: 182 KLKAQELRERARKKKEEEEKRMEREREKERIRIGKELLEAKRMEEVNERKRLMFLRKAEK 241
Query: 332 LQPPKKEDCNRRRKKTATAEERRP--QPPKKEDCNRRRKKTATIEERR 469
+ + + R++ + AE RR PP+ + +EE++
Sbjct: 242 EEEKRAREKIRQKLEEDKAERRRKLGLPPEDPATAAAKPSVPVVEEKK 289
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,341,567
Number of Sequences: 28952
Number of extensions: 409870
Number of successful extensions: 4317
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2972
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4115678784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -