BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030623sawa_G01_e7_13.seq (1556 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.3 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.8 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 25.4 bits (53), Expect = 1.3 Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 1/29 (3%) Frame = +3 Query: 1134 SPXP-PXPXLPPPXPXXXXPPXPXPXPXP 1217 +P P P P P P PP P P P Sbjct: 20 APGPQPSPHQSPQAPQRGSPPNPSQGPPP 48 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 25.0 bits (52), Expect = 1.8 Identities = 9/19 (47%), Positives = 9/19 (47%) Frame = +3 Query: 1134 SPXPPXPXLPPPXPXXXXP 1190 S PP P PPP P P Sbjct: 335 SDTPPKPAPPPPPPSSSGP 353 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 302,206 Number of Sequences: 438 Number of extensions: 7024 Number of successful extensions: 8 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 54668625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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