Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_F11_e86_11.seq
(1494 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 143 4e-34
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 141 1e-33
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 139 5e-33
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 135 7e-32
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 134 1e-31
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 113 3e-25
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 112 8e-25
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 81 3e-15
08_02_1130 + 24517319-24518149,24519374-24519868,24519954-245201... 31 1.8
08_02_1528 + 27666356-27667081 31 3.1
01_07_0112 - 41149461-41151674,41151688-41153265,41154344-411555... 29 7.2
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 29 9.5
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 143 bits (346), Expect = 4e-34
Identities = 89/198 (44%), Positives = 116/198 (58%), Gaps = 7/198 (3%)
Frame = +2
Query: 122 SSTMXVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 295
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 296 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASN 469
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 470 PXSKVFLPQNEG---RLLQVSRXSGHRRNQTFCCRGFTESXPGCFLXSARQNCSPHTQXX 640
P SKVF + +G R L + R++ ++ L P
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALA----ELPPTHPIR 395
Query: 641 LXLASNXSXFYXXILNXP 694
L LA N S FY ILN P
Sbjct: 396 LGLALNFSVFYYEILNSP 413
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 141 bits (341), Expect = 1e-33
Identities = 87/198 (43%), Positives = 117/198 (59%), Gaps = 7/198 (3%)
Frame = +2
Query: 122 SSTMXVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 295
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 296 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASN 469
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 470 PXSKVFLPQNEG---RLLQVSRXSGHRRNQTFCCRGFTESXPGCFLXSARQNCSPHTQXX 640
P SKVF + +G R L + R++ ++ L P
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALA----ELPPTHPIR 177
Query: 641 LXLASNXSXFYXXILNXP 694
L LA N S FY ILN P
Sbjct: 178 LGLALNFSVFYYEILNSP 195
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 139 bits (337), Expect = 5e-33
Identities = 86/193 (44%), Positives = 114/193 (59%), Gaps = 7/193 (3%)
Frame = +2
Query: 137 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 310
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 311 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPXSKV 484
WR++SSIEQK E G+E + KEYR K+E EL +IC +L LLD HL+P ++ SKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 485 FLPQNEG---RLLQVSRXSGHRRNQTFCCRGFTESXPGCFLXSARQNCSPHTQXXLXLAS 655
F + +G R L + R+ ++ L + +P L LA
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALA----DLAPTHPIRLGLAL 176
Query: 656 NXSXFYXXILNXP 694
N S FY ILN P
Sbjct: 177 NFSVFYYEILNSP 189
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 135 bits (327), Expect = 7e-32
Identities = 90/198 (45%), Positives = 112/198 (56%), Gaps = 8/198 (4%)
Frame = +2
Query: 125 STMXVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 298
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 299 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNP 472
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 473 XSKVFLPQNEG---RLLQVSRXSGHRRNQTFCCRGFTESXPGCFLXSARQNCSPHTQ-XX 640
SKVF + +G R L + R+ +S L P T
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADL-----PTTHPIR 176
Query: 641 LXLASNXSXFYXXILNXP 694
L LA N S FY ILN P
Sbjct: 177 LGLALNFSVFYYEILNSP 194
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3
Query: 480 KYSYLKMKGDYYRYLAXVATGETRHSVVEDSQKAYQDA 593
K YLKMKGDY+RYLA +G R E++ AY+ A
Sbjct: 124 KVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSA 161
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 134 bits (325), Expect = 1e-31
Identities = 88/215 (40%), Positives = 118/215 (54%), Gaps = 10/215 (4%)
Frame = +2
Query: 143 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 307
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 308 SWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPXSK 481
SWR++SSIEQK E G+ A+ YR +VE EL IC +L LLD+ L+P A+ +K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 482 VFLPQNEG---RLLQVSRXSGHRRNQTFCCRGFTESXPGCFLXSARQNCSPHTQXXLXLA 652
VF + +G R L + R++ ++ A + SP L LA
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDI----AMKELSPTHPIRLGLA 185
Query: 653 SNXSXFYXXILNXPXQGVXXSXNKAFRXXHSRTST 757
N S FY ILN P + + +AF S T
Sbjct: 186 LNFSVFYYEILNSPDRACTLA-KQAFDEAISELDT 219
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 113 bits (273), Expect = 3e-25
Identities = 75/162 (46%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Frame = +2
Query: 233 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 406
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 407 REICYDVLCLLDKHLIPKASNPXSKVFLPQNEG---RLLQVSRXSGHRRNQTFCCRGFTE 577
IC +L LLD HL+P A SKVF + +G R L + SG R Q E
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFK-SGDERKQA------AE 130
Query: 578 SXPGCFLXS---ARQNCSPHTQXXLXLASNXSXFYXXILNXP 694
S + + A + +P L LA N S FY ILN P
Sbjct: 131 STMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSP 172
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 112 bits (269), Expect = 8e-25
Identities = 53/122 (43%), Positives = 80/122 (65%)
Frame = +2
Query: 140 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 319
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 320 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPXSKVFLPQN 499
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++ + VF +
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 500 EG 505
+G
Sbjct: 123 KG 124
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 489 YLKMKGDYYRYLAXVATGETRHSVVEDSQKAYQ 587
+ KMKGDYYRYLA +TG + + + S AYQ
Sbjct: 119 FYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 80.6 bits (190), Expect = 3e-15
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +2
Query: 200 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 373
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 374 KEYRVKVEKELREICYDVLCLLDK 445
EYR KVE E+ +IC DV+ ++DK
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK 84
Score = 33.9 bits (74), Expect = 0.33
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 501 KGDYYRYLAXVATGETRHSVVEDSQKAYQ 587
KGDYYRYLA TG + V E S AY+
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>08_02_1130 +
24517319-24518149,24519374-24519868,24519954-24520179,
24520267-24520291,24520925-24521234,24521328-24521888
Length = 815
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 435 YWTSTLYLKLVIXKVKYSYLKMKGDYYRYLAXVATGETRHSVVE 566
YWT +Y + ++YS L+ + YL + GE RH + E
Sbjct: 298 YWTWIIYKRKNSDPIRYSLLEKNRERIVYLQKLYCGEERHCICE 341
>08_02_1528 + 27666356-27667081
Length = 241
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +2
Query: 110 QYLPSSTMXVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 289
QY T V K+ K A + + + E E + + +LLS K +
Sbjct: 124 QYFIRLTKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKI 180
Query: 290 VGARRSSWRVISSIEQKTE-GSERKQQMAKEYRV 388
+ S W ++S QKT + +Q A E+ +
Sbjct: 181 TTSNSSKWSLVSKAFQKTRLACQEEQLQALEFAI 214
>01_07_0112 -
41149461-41151674,41151688-41153265,41154344-41155507,
41155807-41156293,41156603-41156759,41157303-41157378
Length = 1891
Score = 29.5 bits (63), Expect = 7.2
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +2
Query: 239 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 418
EL EE LL +K+ V R + ++ Q +G R+ E + +L+ +
Sbjct: 160 ELVVEEATLLW-RFKDDVDDMEEKMRDLEAVIQDVDGKARQGGKDGEAERRWLNKLKSVA 218
Query: 419 YDV---LCLLDKHLIPKASNPXSKVFLPQNEGRLLQVS 523
YDV L LD + K P K+FL +N L +++
Sbjct: 219 YDVEDVLDELDAAQLIKNHQPKLKLFLSRNNPLLRKMT 256
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 29.1 bits (62), Expect = 9.5
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 202 GGRDEGSDGNRRRAQQ-RRKKPSFRCL*KCGRRPTVIM 312
G E +DG RRR++Q RR++P R + G RP++ M
Sbjct: 91 GSAAEAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,034,319
Number of Sequences: 37544
Number of extensions: 391209
Number of successful extensions: 1002
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4780068496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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