Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_F10_e78_12.seq
(1416 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 58 8e-08
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 58 8e-08
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 58 8e-08
BC064588-1|AAH64588.1| 285|Homo sapiens HNRPM protein protein. 58 8e-08
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 58 8e-08
BC008895-1|AAH08895.2| 425|Homo sapiens HNRPM protein protein. 58 8e-08
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 58 8e-08
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 58 8e-08
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 58 8e-08
BC014533-1|AAH14533.3| 211|Homo sapiens MYEF2 protein protein. 57 1e-07
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 57 1e-07
AK002075-1|BAA92070.1| 188|Homo sapiens protein ( Homo sapiens ... 57 1e-07
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 57 1e-07
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 57 1e-07
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 50 2e-05
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 50 2e-05
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 50 2e-05
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 50 2e-05
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 50 3e-05
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 50 3e-05
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 50 3e-05
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 50 3e-05
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 50 3e-05
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 49 4e-05
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 49 4e-05
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 48 6e-05
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 44 0.002
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 44 0.002
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 44 0.002
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 43 0.002
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 40 0.017
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 40 0.017
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 40 0.017
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 40 0.017
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 40 0.022
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 40 0.022
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 40 0.022
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 40 0.022
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 40 0.022
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 38 0.089
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 37 0.15
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 37 0.15
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 37 0.15
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 37 0.15
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 37 0.15
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 37 0.15
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 37 0.15
EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-relate... 37 0.20
BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein. 37 0.20
AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing ... 37 0.20
AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein. 37 0.20
AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein. 37 0.20
AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein. 37 0.20
AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens ... 37 0.20
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 35 0.62
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 35 0.62
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 35 0.62
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 35 0.62
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 35 0.83
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 34 1.4
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 34 1.4
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 34 1.4
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 34 1.4
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 34 1.4
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 33 1.9
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 33 1.9
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 33 3.3
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 33 3.3
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 33 3.3
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 33 3.3
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 33 3.3
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 33 3.3
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 33 3.3
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 33 3.3
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 33 3.3
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 33 3.3
BC139781-1|AAI39782.2| 638|Homo sapiens ENOX2 protein protein. 32 4.4
BC108713-1|AAI08714.1| 468|Homo sapiens ENOX2 protein protein. 32 4.4
AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif prote... 32 4.4
AL713781-1|CAD28541.1| 50|Homo sapiens hypothetical protein pr... 32 4.4
AL591908-2|CAH71676.1| 610|Homo sapiens cytosolic ovarian carci... 32 4.4
AL591908-1|CAH71675.1| 581|Homo sapiens cytosolic ovarian carci... 32 4.4
AL133207-1|CAB61581.2| 376|Homo sapiens hypothetical protein pr... 32 4.4
AL049733-4|CAI43114.1| 610|Homo sapiens cytosolic ovarian carci... 32 4.4
AL049733-3|CAI43113.1| 581|Homo sapiens cytosolic ovarian carci... 32 4.4
AL049733-2|CAI43112.1| 376|Homo sapiens cytosolic ovarian carci... 32 4.4
AF207881-1|AAF20934.2| 610|Homo sapiens tumor-associated hydroq... 32 4.4
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 477 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 536
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 537 VKFESPEVAERACRMMNGMKLSGREIDVR 565
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 598 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 657
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 658 VKFESPEVAERACRMMNGMKLSGREIDVR 686
Score = 32.3 bits (70), Expect = 4.4
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +3
Query: 96 ISNLPPSVTWQ----LIREKFSECGDVKF---AETTGPDTAIVRFHKEWDAERAIKMFDR 254
I+N+P V WQ L++EK E V+ AE A+V F E ++A ++ ++
Sbjct: 75 ITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNK 134
Query: 255 TRIEGRTIDVR 287
+ GR + V+
Sbjct: 135 HSLSGRPLKVK 145
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 636 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 695
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 696 VKFESPEVAERACRMMNGMKLSGREIDVR 724
Score = 32.3 bits (70), Expect = 4.4
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +3
Query: 96 ISNLPPSVTWQ----LIREKFSECGDVKF---AETTGPDTAIVRFHKEWDAERAIKMFDR 254
I+N+P V WQ L++EK E V+ AE A+V F E ++A ++ ++
Sbjct: 74 ITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNK 133
Query: 255 TRIEGRTIDVR 287
+ GR + V+
Sbjct: 134 HSLSGRPLKVK 144
>BC064588-1|AAH64588.1| 285|Homo sapiens HNRPM protein protein.
Length = 285
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 192 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 251
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 252 VKFESPEVAERACRMMNGMKLSGREIDVR 280
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 637 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 696
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 697 VKFESPEVAERACRMMNGMKLSGREIDVR 725
Score = 32.3 bits (70), Expect = 4.4
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +3
Query: 96 ISNLPPSVTWQ----LIREKFSECGDVKF---AETTGPDTAIVRFHKEWDAERAIKMFDR 254
I+N+P V WQ L++EK E V+ AE A+V F E ++A ++ ++
Sbjct: 75 ITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNK 134
Query: 255 TRIEGRTIDVR 287
+ GR + V+
Sbjct: 135 HSLSGRPLKVK 145
>BC008895-1|AAH08895.2| 425|Homo sapiens HNRPM protein protein.
Length = 425
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 332 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 391
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 392 VKFESPEVAERACRMMNGMKLSGREIDVR 420
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 637 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 696
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 697 VKFESPEVAERACRMMNGMKLSGREIDVR 725
Score = 32.3 bits (70), Expect = 4.4
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +3
Query: 96 ISNLPPSVTWQ----LIREKFSECGDVKF---AETTGPDTAIVRFHKEWDAERAIKMFDR 254
I+N+P V WQ L++EK E V+ AE A+V F E ++A ++ ++
Sbjct: 75 ITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNK 134
Query: 255 TRIEGRTIDVR 287
+ GR + V+
Sbjct: 135 HSLSGRPLKVK 145
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 598 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 657
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 658 VKFESPEVAERACRMMNGMKLSGREIDVR 686
Score = 32.3 bits (70), Expect = 4.4
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +3
Query: 96 ISNLPPSVTWQ----LIREKFSECGDVKF---AETTGPDTAIVRFHKEWDAERAIKMFDR 254
I+N+P V WQ L++EK E V+ AE A+V F E ++A ++ ++
Sbjct: 75 ITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNK 134
Query: 255 TRIEGRTIDVR 287
+ GR + V+
Sbjct: 135 HSLSGRPLKVK 145
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 36 SYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAI 200
S+G G + + + + NLP TW+++++KF+ECG D+K +
Sbjct: 522 SFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGV 581
Query: 201 VRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
V+F AERA +M + ++ GR IDVR
Sbjct: 582 VKFESPEVAERACRMMNGMKLSGREIDVR 610
>BC014533-1|AAH14533.3| 211|Homo sapiens MYEF2 protein protein.
Length = 211
Score = 57.2 bits (132), Expect = 1e-07
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 84 DMVMISNLPPSVTWQLIREKFSECGDVKFAET-----TGPDTAIVRFHKEWDAERAIKMF 248
+ + + NLP +TWQ ++EKFS+CG V FAE VRF AE+A ++
Sbjct: 134 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIM 193
Query: 249 DRTRIEGRTIDVR 287
+ +I GR IDVR
Sbjct: 194 NGIKISGREIDVR 206
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 57.2 bits (132), Expect = 1e-07
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 84 DMVMISNLPPSVTWQLIREKFSECGDVKFAET-----TGPDTAIVRFHKEWDAERAIKMF 248
+ + + NLP +TWQ ++EKFS+CG V FAE VRF AE+A ++
Sbjct: 499 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIM 558
Query: 249 DRTRIEGRTIDVR 287
+ +I GR IDVR
Sbjct: 559 NGIKISGREIDVR 571
Score = 35.5 bits (78), Expect = 0.47
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +3
Query: 39 YGRENAQQSGREK--TSDMVMISNLPPSVTWQ----LIREKFSECGDV---KFAETTGPD 191
Y ++ +G +K + V ISN+P + WQ L+REK E V K AE
Sbjct: 83 YSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRG 142
Query: 192 TAIVRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
+V F E ++A++ ++ + GR ++++
Sbjct: 143 CGVVEFKDEEFVKKALETMNKYDLSGRPLNIK 174
>AK002075-1|BAA92070.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ11213 fis, clone PLACE1007969, weakly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 188
Score = 57.2 bits (132), Expect = 1e-07
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 84 DMVMISNLPPSVTWQLIREKFSECGDVKFAET-----TGPDTAIVRFHKEWDAERAIKMF 248
+ + + NLP +TWQ ++EKFS+CG V FAE VRF AE+A ++
Sbjct: 111 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIM 170
Query: 249 DRTRIEGRTIDVR 287
+ +I GR IDVR
Sbjct: 171 NGIKISGREIDVR 183
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 57.2 bits (132), Expect = 1e-07
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 84 DMVMISNLPPSVTWQLIREKFSECGDVKFAET-----TGPDTAIVRFHKEWDAERAIKMF 248
+ + + NLP +TWQ ++EKFS+CG V FAE VRF AE+A ++
Sbjct: 470 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIM 529
Query: 249 DRTRIEGRTIDVR 287
+ +I GR IDVR
Sbjct: 530 NGIKISGREIDVR 542
Score = 35.9 bits (79), Expect = 0.36
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +3
Query: 39 YGRENAQQSGREK--TSDMVMISNLPPSVTWQ----LIREKFSECGDV---KFAETTGPD 191
Y ++ +G +K + V ISN+P + WQ L+REK E V K AE
Sbjct: 30 YSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRG 89
Query: 192 TAIVRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
+V F E ++A++ ++ + GR ++++
Sbjct: 90 CGVVEFKDEEFVKKALETMNKYDLSGRRVNIK 121
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 57.2 bits (132), Expect = 1e-07
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 84 DMVMISNLPPSVTWQLIREKFSECGDVKFAET-----TGPDTAIVRFHKEWDAERAIKMF 248
+ + + NLP +TWQ ++EKFS+CG V FAE VRF AE+A ++
Sbjct: 543 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIM 602
Query: 249 DRTRIEGRTIDVR 287
+ +I GR IDVR
Sbjct: 603 NGIKISGREIDVR 615
Score = 35.5 bits (78), Expect = 0.47
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +3
Query: 39 YGRENAQQSGREK--TSDMVMISNLPPSVTWQ----LIREKFSECGDV---KFAETTGPD 191
Y ++ +G +K + V ISN+P + WQ L+REK E V K AE
Sbjct: 103 YSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRG 162
Query: 192 TAIVRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
+V F E ++A++ ++ + GR ++++
Sbjct: 163 CGVVEFKDEEFVKKALETMNKYDLSGRPLNIK 194
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAIKMFDR 254
++ + V++S LPPS +WQ +++ E GDV +A+ T +V F ++ D A++ D
Sbjct: 118 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDN 177
Query: 255 TRI---EGRTIDVR 287
T+ EG T +R
Sbjct: 178 TKFRSHEGETAYIR 191
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAIKMFDR 254
++ + V++S LPPS +WQ +++ E GDV +A+ T +V F ++ D A++ D
Sbjct: 118 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDN 177
Query: 255 TRI---EGRTIDVR 287
T+ EG T +R
Sbjct: 178 TKFRSHEGETAYIR 191
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAIKMFDR 254
++ + V++S LPPS +WQ +++ E GDV +A+ T +V F ++ D A++ D
Sbjct: 118 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDN 177
Query: 255 TRI---EGRTIDVR 287
T+ EG T +R
Sbjct: 178 TKFRSHEGETAYIR 191
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAIKMFDR 254
++ + V++S LPPS +WQ +++ E GDV +A+ T +V F ++ D A++ D
Sbjct: 118 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDN 177
Query: 255 TRI---EGRTIDVR 287
T+ EG T +R
Sbjct: 178 TKFRSHEGETAYIR 191
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Frame = +3
Query: 18 VSMPNQSYGRENAQQSGRE----KTSDM-VMISNLPPSVTWQLIREKFSECGDVKFAETT 182
V P GR + GR + SD V++S LPPS +WQ +++ E GDV +A+
Sbjct: 84 VEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 183 GPDTAIVRFHKEWDAERAIKMFDRTRI---EGRTIDVRYF 293
+V + ++ D E A++ D T+ EG T +R +
Sbjct: 144 KDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVY 183
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Frame = +3
Query: 18 VSMPNQSYGRENAQQSGRE----KTSDM-VMISNLPPSVTWQLIREKFSECGDVKFAETT 182
V P GR + GR + SD V++S LPPS +WQ +++ E GDV +A+
Sbjct: 84 VEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 183 GPDTAIVRFHKEWDAERAIKMFDRTRI---EGRTIDVRYF 293
+V + ++ D E A++ D T+ EG T +R +
Sbjct: 144 KDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVY 183
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Frame = +3
Query: 18 VSMPNQSYGRENAQQSGRE----KTSDM-VMISNLPPSVTWQLIREKFSECGDVKFAETT 182
V P GR + GR + SD V++S LPPS +WQ +++ E GDV +A+
Sbjct: 84 VEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 183 GPDTAIVRFHKEWDAERAIKMFDRTRI---EGRTIDVRYF 293
+V + ++ D E A++ D T+ EG T +R +
Sbjct: 144 KDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVY 183
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Frame = +3
Query: 18 VSMPNQSYGRENAQQSGRE----KTSDM-VMISNLPPSVTWQLIREKFSECGDVKFAETT 182
V P GR + GR + SD V++S LPPS +WQ +++ E GDV +A+
Sbjct: 84 VEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 183 GPDTAIVRFHKEWDAERAIKMFDRTRI---EGRTIDVRYF 293
+V + ++ D E A++ D T+ EG T +R +
Sbjct: 144 KDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVY 183
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Frame = +3
Query: 18 VSMPNQSYGRENAQQSGRE----KTSDM-VMISNLPPSVTWQLIREKFSECGDVKFAETT 182
V P GR + GR + SD V++S LPPS +WQ +++ E GDV +A+
Sbjct: 84 VEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 183 GPDTAIVRFHKEWDAERAIKMFDRTRI---EGRTIDVRYF 293
+V + ++ D E A++ D T+ EG T +R +
Sbjct: 144 KDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVY 183
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 49.2 bits (112), Expect = 4e-05
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAIKMFDR 254
++ + V++S LPPS +WQ +++ E GDV +A+ T +V F ++ D A++ D
Sbjct: 118 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDN 177
Query: 255 TRIEGRTI 278
T+ +
Sbjct: 178 TKFRSHEV 185
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 49.2 bits (112), Expect = 4e-05
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAIKMFDR 254
++ + V++S LPPS +WQ +++ E GDV +A+ T +V F ++ D A++ D
Sbjct: 150 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDN 209
Query: 255 TRIEGRTI 278
T+ +
Sbjct: 210 TKFRSHEV 217
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 48.4 bits (110), Expect = 6e-05
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAIKMFDR 254
++ + V++S LPPS +WQ +++ E GDV +A+ T +V F ++ D A++ D
Sbjct: 118 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDN 177
Query: 255 TR 260
T+
Sbjct: 178 TK 179
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 RENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAI--VRFHKE 218
+ + S +E+ + ++ NLP VT ++E F + +++ G I + F E
Sbjct: 380 KPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTE 439
Query: 219 WDAERAIKMFDRTRIEGRTIDVRY 290
DAE+ + T I+GR+I + Y
Sbjct: 440 ADAEKTFEEKQGTEIDGRSISLYY 463
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 RENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAI--VRFHKE 218
+ + S +E+ + ++ NLP VT ++E F + +++ G I + F E
Sbjct: 357 KPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTE 416
Query: 219 WDAERAIKMFDRTRIEGRTIDVRY 290
DAE+ + T I+GR+I + Y
Sbjct: 417 ADAEKTFEEKQGTEIDGRSISLYY 440
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 RENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAI--VRFHKE 218
+ + S +E+ + ++ NLP VT ++E F + +++ G I + F E
Sbjct: 380 KPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTE 439
Query: 219 WDAERAIKMFDRTRIEGRTIDVRY 290
DAE+ + T I+GR+I + Y
Sbjct: 440 ADAEKTFEEKQGTEIDGRSISLYY 463
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 43.2 bits (97), Expect = 0.002
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 RENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAI--VRFHKE 218
+ + S +E+ + ++ NLP VT ++E F + +++ G I + F E
Sbjct: 273 KPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGNSKGIAYIEFKTE 332
Query: 219 WDAERAIKMFDRTRIEGRTIDVRY 290
DAE+ + T I+GR+I + Y
Sbjct: 333 ADAEKTFEEKQGTEIDGRSISLYY 356
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 40.3 bits (90), Expect = 0.017
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 45 RENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGP--DTAIVRFHKE 218
R + + + +T + +++ NL V+WQ +++ + G+V FA+ P + +V F
Sbjct: 95 RNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASY 154
Query: 219 WDAERAIKMFDRTRIEGRTI 278
D + AI+ I GR I
Sbjct: 155 GDLKNAIEKLSGKEINGRKI 174
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 40.3 bits (90), Expect = 0.017
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 45 RENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGP--DTAIVRFHKE 218
R + + + +T + +++ NL V+WQ +++ + G+V FA+ P + +V F
Sbjct: 95 RNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASY 154
Query: 219 WDAERAIKMFDRTRIEGRTI 278
D + AI+ I GR I
Sbjct: 155 GDLKNAIEKLSGKEINGRKI 174
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 40.3 bits (90), Expect = 0.017
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 45 RENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGP--DTAIVRFHKE 218
R + + + +T + +++ NL V+WQ +++ + G+V FA+ P + +V F
Sbjct: 95 RNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASY 154
Query: 219 WDAERAIKMFDRTRIEGRTI 278
D + AI+ I GR I
Sbjct: 155 GDLKNAIEKLSGKEINGRKI 174
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 40.3 bits (90), Expect = 0.017
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 45 RENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGP--DTAIVRFHKE 218
R + + + +T + +++ NL V+WQ +++ + G+V FA+ P + +V F
Sbjct: 95 RNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASY 154
Query: 219 WDAERAIKMFDRTRIEGRTI 278
D + AI+ I GR I
Sbjct: 155 GDLKNAIEKLSGKEINGRKI 174
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 39.9 bits (89), Expect = 0.022
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 42 GRENAQQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDT--A 197
G + + SGR+K T +++ NL +WQ +++ + G+V +A+ T
Sbjct: 90 GYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEG 149
Query: 198 IVRFHKEWDAERAIKMFDRTRIEGRTI 278
++ F D +RA+ D T I GR I
Sbjct: 150 VIEFRSYSDMKRALDKLDGTEINGRNI 176
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 39.9 bits (89), Expect = 0.022
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 42 GRENAQQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDT--A 197
G + + SGR+K T +++ NL +WQ +++ + G+V +A+ T
Sbjct: 90 GYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEG 149
Query: 198 IVRFHKEWDAERAIKMFDRTRIEGRTI 278
++ F D +RA+ D T I GR I
Sbjct: 150 VIEFRSYSDMKRALDKLDGTEINGRNI 176
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 39.9 bits (89), Expect = 0.022
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 42 GRENAQQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDT--A 197
G + + SGR+K T +++ NL +WQ +++ + G+V +A+ T
Sbjct: 90 GYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEG 149
Query: 198 IVRFHKEWDAERAIKMFDRTRIEGRTI 278
++ F D +RA+ D T I GR I
Sbjct: 150 VIEFRSYSDMKRALDKLDGTEINGRNI 176
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 39.9 bits (89), Expect = 0.022
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 42 GRENAQQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDT--A 197
G + + SGR+K T +++ NL +WQ +++ + G+V +A+ T
Sbjct: 90 GYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEG 149
Query: 198 IVRFHKEWDAERAIKMFDRTRIEGRTI 278
++ F D +RA+ D T I GR I
Sbjct: 150 VIEFRSYSDMKRALDKLDGTEINGRNI 176
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 39.9 bits (89), Expect = 0.022
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 42 GRENAQQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDT--A 197
G + + SGR+K T +++ NL +WQ +++ + G+V +A+ T
Sbjct: 124 GYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEG 183
Query: 198 IVRFHKEWDAERAIKMFDRTRIEGRTI 278
++ F D +RA+ D T I GR I
Sbjct: 184 VIEFRSYSDMKRALDKLDGTEINGRNI 210
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 37.9 bits (84), Expect = 0.089
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 36 SYGRENAQQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPD 191
S G ++SGR+K T +++ NL +WQ +++ + G+V +A+ +
Sbjct: 7 SKGGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN 66
Query: 192 TAIVRFHKEWDAERAIKMFDRTRIEGRTI 278
++ F D +RA++ D T + GR I
Sbjct: 67 EGVIEFVSYSDMKRALEKLDGTEVNGRKI 95
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.15
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 57 QQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFH 212
++SGR+K T +++ NL +WQ +++ + G+V +A+ + ++ F
Sbjct: 89 RRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFV 148
Query: 213 KEWDAERAIKMFDRTRIEGRTI 278
D +RA++ D T + GR I
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKI 170
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.15
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 57 QQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFH 212
++SGR+K T +++ NL +WQ +++ + G+V +A+ + ++ F
Sbjct: 89 RRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFV 148
Query: 213 KEWDAERAIKMFDRTRIEGRTI 278
D +RA++ D T + GR I
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKI 170
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.15
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 57 QQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFH 212
++SGR+K T +++ NL +WQ +++ + G+V +A+ + ++ F
Sbjct: 89 RRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFV 148
Query: 213 KEWDAERAIKMFDRTRIEGRTI 278
D +RA++ D T + GR I
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKI 170
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.15
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 57 QQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFH 212
++SGR+K T +++ NL +WQ +++ + G+V +A+ + ++ F
Sbjct: 89 RRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFV 148
Query: 213 KEWDAERAIKMFDRTRIEGRTI 278
D +RA++ D T + GR I
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKI 170
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.15
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 57 QQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFH 212
++SGR+K T +++ NL +WQ +++ + G+V +A+ + ++ F
Sbjct: 89 RRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFV 148
Query: 213 KEWDAERAIKMFDRTRIEGRTI 278
D +RA++ D T + GR I
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKI 170
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.15
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 57 QQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFH 212
++SGR+K T +++ NL +WQ +++ + G+V +A+ + ++ F
Sbjct: 89 RRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFV 148
Query: 213 KEWDAERAIKMFDRTRIEGRTI 278
D +RA++ D T + GR I
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKI 170
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 37.1 bits (82), Expect = 0.15
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 57 QQSGREK------TSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFH 212
++SGR+K T +++ NL +WQ +++ + G+V +A+ + ++ F
Sbjct: 89 RRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFV 148
Query: 213 KEWDAERAIKMFDRTRIEGRTI 278
D +RA++ D T + GR I
Sbjct: 149 SYSDMKRALEKLDGTEVNGRKI 170
>EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-related
and time keeping constitutive hydroquinone (NADH) oxid
protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.20
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T ++I+E F +CGD+ + + +RF +E+ ++AI
Sbjct: 144 VFVGGLPENATEEIIQEVFEQCGDITAIRKSKKNFCHIRFAEEFMVDKAI 193
>BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.20
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T ++I+E F +CGD+ + + +RF +E+ ++AI
Sbjct: 144 VFVGGLPENATEEIIQEVFEQCGDITAIRKSKKNFCHIRFAEEFMVDKAI 193
>AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing
protein 38 protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.20
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T ++I+E F +CGD+ + + +RF +E+ ++AI
Sbjct: 144 VFVGGLPENATEEIIQEVFEQCGDITAIRKSKKNFCHIRFAEEFMVDKAI 193
>AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.20
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T ++I+E F +CGD+ + + +RF +E+ ++AI
Sbjct: 144 VFVGGLPENATEEIIQEVFEQCGDITAIRKSKKNFCHIRFAEEFMVDKAI 193
>AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.20
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T ++I+E F +CGD+ + + +RF +E+ ++AI
Sbjct: 144 VFVGGLPENATEEIIQEVFEQCGDITAIRKSKKNFCHIRFAEEFMVDKAI 193
>AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.20
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T ++I+E F +CGD+ + + +RF +E+ ++AI
Sbjct: 144 VFVGGLPENATEEIIQEVFEQCGDITAIRKSKKNFCHIRFAEEFMVDKAI 193
>AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens
cDNA FLJ10094 fis, clone HEMBA1002419. ).
Length = 643
Score = 36.7 bits (81), Expect = 0.20
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T ++I+E F +CGD+ + + +RF +E+ ++AI
Sbjct: 144 VFVGGLPENATEEIIQEVFEQCGDITAIRKSKKNFCHIRFAEEFMVDKAI 193
>X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric cap
binding complex CBC protein.
Length = 156
Score = 35.1 bits (77), Expect = 0.62
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +3
Query: 30 NQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFA-------ETTGP 188
+Q + +N +Q K S + + NL T + I E FS+ GD+K + T
Sbjct: 22 DQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTAC 81
Query: 189 DTAIVRFHKEWDAERAIKMFDRTRIEGRTI 278
V ++ DAE A++ + TR++ R I
Sbjct: 82 GFCFVEYYSRADAENAMRYINGTRLDDRII 111
>BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 35.1 bits (77), Expect = 0.62
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +3
Query: 30 NQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFA-------ETTGP 188
+Q + +N +Q K S + + NL T + I E FS+ GD+K + T
Sbjct: 22 DQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTAC 81
Query: 189 DTAIVRFHKEWDAERAIKMFDRTRIEGRTI 278
V ++ DAE A++ + TR++ R I
Sbjct: 82 GFCFVEYYSRADAENAMRYINGTRLDDRII 111
>BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 35.1 bits (77), Expect = 0.62
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +3
Query: 30 NQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFA-------ETTGP 188
+Q + +N +Q K S + + NL T + I E FS+ GD+K + T
Sbjct: 22 DQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTAC 81
Query: 189 DTAIVRFHKEWDAERAIKMFDRTRIEGRTI 278
V ++ DAE A++ + TR++ R I
Sbjct: 82 GFCFVEYYSRADAENAMRYINGTRLDDRII 111
>AY644767-1|AAV85455.1| 156|Homo sapiens cell
proliferation-inducing gene 55 protein.
Length = 156
Score = 35.1 bits (77), Expect = 0.62
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +3
Query: 30 NQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFA-------ETTGP 188
+Q + +N +Q K S + + NL T + I E FS+ GD+K + T
Sbjct: 22 DQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTAC 81
Query: 189 DTAIVRFHKEWDAERAIKMFDRTRIEGRTI 278
V ++ DAE A++ + TR++ R I
Sbjct: 82 GFCFVEYYSRADAENAMRYINGTRLDDRII 111
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 34.7 bits (76), Expect = 0.83
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFA----ETTGPD--TAIVRFHKEWDAERA 236
+T +++SNL V+ I+E F+E G +K A + +G TA V F ++ DA +A
Sbjct: 103 ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKA 162
Query: 237 IKMFDRTRIEGRTIDVR 287
+K ++ ++GR ++++
Sbjct: 163 MKQYNGVPLDGRPMNIQ 179
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 33.9 bits (74), Expect = 1.4
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTA-------IVRFHKEWDAERAIKMF 248
++++ LP ++T +R FS G+V+ A+ A V + DAERAI
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 249 DRTRIEGRTIDVRY 290
+ R++ +TI V Y
Sbjct: 82 NGLRLQSKTIKVSY 95
>D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein 1
protein.
Length = 156
Score = 33.9 bits (74), Expect = 1.4
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +3
Query: 30 NQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFA-------ETTGP 188
+Q + +N +Q K S + + NL T + I E FS+ GD+K + T
Sbjct: 22 DQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTAC 81
Query: 189 DTAIVRFHKEWDAERAIKMFDRTRIEGRTI 278
V ++ DAE +++ + TR++ R I
Sbjct: 82 GFCFVEYYSRADAENSMRYINGTRLDDRII 111
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 33.9 bits (74), Expect = 1.4
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTA-------IVRFHKEWDAERAIKMF 248
++++ LP ++T +R FS G+V+ A+ A V + DAERAI
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 249 DRTRIEGRTIDVRY 290
+ R++ +TI V Y
Sbjct: 82 NGLRLQSKTIKVSY 95
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 33.9 bits (74), Expect = 1.4
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTA-------IVRFHKEWDAERAIKMF 248
++++ LP ++T +R FS G+V+ A+ A V + DAERAI
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 249 DRTRIEGRTIDVRY 290
+ R++ +TI V Y
Sbjct: 82 NGLRLQSKTIKVSY 95
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 33.9 bits (74), Expect = 1.4
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFA----ETTGPD--TAIVRFHKEWDAERA 236
+T +++SNL V+ I+E F+E G +K A + +G TA V F ++ DA +A
Sbjct: 79 ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTANVHFERKADALKA 138
Query: 237 IKMFDRTRIEGRTIDVR 287
+K ++ ++GR ++++
Sbjct: 139 MKQYNGFPLDGRPMNIQ 155
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 33.5 bits (73), Expect = 1.9
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 69 REKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAE--TTGPDTAIVR--FHKEWDAERA 236
+++ S + I N+PP + W+++ ++ G V+ E T +TA+V + +A
Sbjct: 76 KKQRSRKIQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETAVVNVTYSNREQTRQA 135
Query: 237 IKMFDRTRIEGRTIDVRY 290
I + ++E + V Y
Sbjct: 136 IMKLNGHQLENHALKVSY 153
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 33.5 bits (73), Expect = 1.9
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 69 REKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAE--TTGPDTAIVR--FHKEWDAERA 236
+++ S + I N+PP + W+++ ++ G V+ E T +TA+V + +A
Sbjct: 76 KKQRSRKIQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETAVVNVTYSNREQTRQA 135
Query: 237 IKMFDRTRIEGRTIDVRY 290
I + ++E + V Y
Sbjct: 136 IMKLNGHQLENHALKVSY 153
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 170 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 229
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 230 NSADADRAREKLHGTVVEGRKIEV 253
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 99 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 158
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 159 NSADADRAREKLHGTVVEGRKIEV 182
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 99 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 158
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 159 NSADADRAREKLHGTVVEGRKIEV 182
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 109 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 168
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 169 NSADADRAREKLHGTVVEGRKIEV 192
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 107 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 166
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 167 NSADADRAREKLHGTVVEGRKIEV 190
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 100 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 159
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 160 NSADADRAREKLHGTVVEGRKIEV 183
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 100 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 159
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 160 NSADADRAREKLHGTVVEGRKIEV 183
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 100 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 159
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 160 NSADADRAREKLHGTVVEGRKIEV 183
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 169 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 228
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 229 NSADADRAREKLHGTVVEGRKIEV 252
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 99 QSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 158
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 159 NSADADRAREKLHGTVVEGRKIEV 182
>BC139781-1|AAI39782.2| 638|Homo sapiens ENOX2 protein protein.
Length = 638
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 158 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 207
>BC108713-1|AAI08714.1| 468|Homo sapiens ENOX2 protein protein.
Length = 468
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 101 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 150
>AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif protein
9 protein.
Length = 370
Score = 32.3 bits (70), Expect = 4.4
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 ENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKFAETTGPDTAIVRFH 212
++++ S + T + +SN+P +R+ F + G ++ F E V F
Sbjct: 99 QSSENSEGKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE 158
Query: 213 KEWDAERAIKMFDRTRIEGRTIDV 284
DA+RA + T +EGR I+V
Sbjct: 159 NSADADRAREKLHGTVVEGRKIEV 182
>AL713781-1|CAD28541.1| 50|Homo sapiens hypothetical protein
protein.
Length = 50
Score = 32.3 bits (70), Expect = 4.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 159 DVKFAETTGPDTAIVRFHKEWDAERAIKMFDRTRIEGRTIDVR 287
D+K +V+F AERA +M + ++ GR IDVR
Sbjct: 3 DIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVR 45
>AL591908-2|CAH71676.1| 610|Homo sapiens cytosolic ovarian
carcinoma antigen 1 protein.
Length = 610
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 130 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 179
>AL591908-1|CAH71675.1| 581|Homo sapiens cytosolic ovarian
carcinoma antigen 1 protein.
Length = 581
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 101 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 150
>AL133207-1|CAB61581.2| 376|Homo sapiens hypothetical protein
protein.
Length = 376
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 101 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 150
>AL049733-4|CAI43114.1| 610|Homo sapiens cytosolic ovarian
carcinoma antigen 1 protein.
Length = 610
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 130 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 179
>AL049733-3|CAI43113.1| 581|Homo sapiens cytosolic ovarian
carcinoma antigen 1 protein.
Length = 581
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 101 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 150
>AL049733-2|CAI43112.1| 376|Homo sapiens cytosolic ovarian
carcinoma antigen 1 protein.
Length = 376
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 101 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 150
>AF207881-1|AAF20934.2| 610|Homo sapiens tumor-associated
hydroquinone (NADH) oxidase tNOX protein.
Length = 610
Score = 32.3 bits (70), Expect = 4.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP + T Q+I E F +CG++ + + +RF +E+ ++A+
Sbjct: 130 VFVGGLPENGTEQIIVEVFEQCGEIIAIRKSKKNFCHIRFAEEYMVDKAL 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,183,510
Number of Sequences: 237096
Number of extensions: 2606867
Number of successful extensions: 4569
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 4421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4554
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20717852652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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