Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_F10_e78_12.seq
(1416 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p pro... 91 3e-18
AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA ... 91 3e-18
AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p pro... 51 3e-06
AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family sp... 51 3e-06
AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family sp... 51 3e-06
AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA... 51 3e-06
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 39 0.014
BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 39 0.014
BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 39 0.014
AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 39 0.014
AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 39 0.014
AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 39 0.014
X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 37 0.058
AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 37 0.058
AY113495-1|AAM29500.1| 330|Drosophila melanogaster RE53017p pro... 36 0.13
AY071251-1|AAL48873.1| 330|Drosophila melanogaster RE29010p pro... 36 0.13
AE014296-2206|AAN11866.1| 430|Drosophila melanogaster CG10948-P... 36 0.13
AE014296-2205|AAN11865.1| 437|Drosophila melanogaster CG10948-P... 36 0.13
AE014296-2204|AAF49873.2| 804|Drosophila melanogaster CG10948-P... 36 0.13
AY061430-1|AAL28978.1| 474|Drosophila melanogaster LD35981p pro... 36 0.18
AE014298-2767|AAF48885.2| 474|Drosophila melanogaster CG6961-PA... 36 0.18
AE014298-2765|AAF48882.2| 474|Drosophila melanogaster CG18259-P... 36 0.18
AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p pro... 34 0.54
AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding ... 34 0.54
AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-P... 34 0.54
AY118842-1|AAM50702.1| 435|Drosophila melanogaster GM13065p pro... 31 3.8
BT010058-1|AAQ22527.1| 865|Drosophila melanogaster LD15974p pro... 31 5.0
AY118678-1|AAM50538.1| 582|Drosophila melanogaster AT08247p pro... 31 5.0
AE014296-1825|AAF50154.2| 849|Drosophila melanogaster CG32062-P... 31 5.0
AE014296-1824|AAF50153.2| 881|Drosophila melanogaster CG32062-P... 31 5.0
>AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p
protein.
Length = 430
Score = 91.1 bits (216), Expect = 3e-18
Identities = 44/88 (50%), Positives = 57/88 (64%)
Frame = +3
Query: 30 NQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRF 209
N + G NA G + SD ++I N+P + TWQ +R+KF E GDVKFAE G D +VRF
Sbjct: 345 NSNVGSANAV--GASRKSDTIIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRF 402
Query: 210 HKEWDAERAIKMFDRTRIEGRTIDVRYF 293
KE DAE AI + D +R++GR I V YF
Sbjct: 403 FKERDAELAIALMDGSRLDGRNIKVTYF 430
>AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA
protein.
Length = 632
Score = 91.1 bits (216), Expect = 3e-18
Identities = 44/88 (50%), Positives = 57/88 (64%)
Frame = +3
Query: 30 NQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRF 209
N + G NA G + SD ++I N+P + TWQ +R+KF E GDVKFAE G D +VRF
Sbjct: 547 NSNVGSANAV--GASRKSDTIIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRF 604
Query: 210 HKEWDAERAIKMFDRTRIEGRTIDVRYF 293
KE DAE AI + D +R++GR I V YF
Sbjct: 605 FKERDAELAIALMDGSRLDGRNIKVTYF 632
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = +3
Query: 54 AQQSGREKTSDMVMISNLPPSVTWQLIREKFSE-CGDVKFAETTGPDT------AIVRFH 212
A+ RE+ + V ISN+P WQ +++ F G +++ + ++ IV F
Sbjct: 47 ARDRSRERRNCRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFK 106
Query: 213 KEWDAERAIKMFDRTRIEGRTIDVR 287
+ ++A++ +R + GR + V+
Sbjct: 107 DPENVQKALEKMNRYEVNGRELVVK 131
>AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p
protein.
Length = 255
Score = 51.2 bits (117), Expect = 3e-06
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +3
Query: 42 GRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEW 221
GR + +++ VM++ LP S +WQ +++ E GDV FA+T + +V F +
Sbjct: 101 GRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHE 160
Query: 222 DAERAIKMFDRTRIEGRTIDVRY 290
D + AIK D +R +V Y
Sbjct: 161 DMKYAIKKLDDSRFRSHEGEVAY 183
Score = 37.1 bits (82), Expect = 0.058
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETT---GPDTAIVRFHKEWDAERAIKMFDRTR 260
+ + NLPP + + I++ F + G V F + GP A V F DA+ A+K D
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYD 68
Query: 261 IEGRTIDVRY 290
+G + V +
Sbjct: 69 YDGYRLRVEF 78
>AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family
splicing factor protein.
Length = 255
Score = 51.2 bits (117), Expect = 3e-06
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +3
Query: 42 GRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEW 221
GR + +++ VM++ LP S +WQ +++ E GDV FA+T + +V F +
Sbjct: 101 GRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHE 160
Query: 222 DAERAIKMFDRTRIEGRTIDVRY 290
D + AIK D +R +V Y
Sbjct: 161 DMKYAIKKLDDSRFRSHEGEVAY 183
Score = 37.1 bits (82), Expect = 0.058
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETT---GPDTAIVRFHKEWDAERAIKMFDRTR 260
+ + NLPP + + I++ F + G V F + GP A V F DA+ A+K D
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYD 68
Query: 261 IEGRTIDVRY 290
+G + V +
Sbjct: 69 YDGYRLRVEF 78
>AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family
splicing factor SF2 protein.
Length = 255
Score = 51.2 bits (117), Expect = 3e-06
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +3
Query: 42 GRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEW 221
GR + +++ VM++ LP S +WQ +++ E GDV FA+T + +V F +
Sbjct: 101 GRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHE 160
Query: 222 DAERAIKMFDRTRIEGRTIDVRY 290
D + AIK D +R +V Y
Sbjct: 161 DMKYAIKKLDDSRFRSHEGEVAY 183
Score = 37.1 bits (82), Expect = 0.058
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETT---GPDTAIVRFHKEWDAERAIKMFDRTR 260
+ + NLPP + + I++ F + G V F + GP A V F DA+ A+K D
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYD 68
Query: 261 IEGRTIDVRY 290
+G + V +
Sbjct: 69 YDGYRLRVEF 78
>AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA
protein.
Length = 255
Score = 51.2 bits (117), Expect = 3e-06
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +3
Query: 42 GRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEW 221
GR + +++ VM++ LP S +WQ +++ E GDV FA+T + +V F +
Sbjct: 101 GRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHE 160
Query: 222 DAERAIKMFDRTRIEGRTIDVRY 290
D + AIK D +R +V Y
Sbjct: 161 DMKYAIKKLDDSRFRSHEGEVAY 183
Score = 37.1 bits (82), Expect = 0.058
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETT---GPDTAIVRFHKEWDAERAIKMFDRTR 260
+ + NLPP + + I++ F + G V F + GP A V F DA+ A+K D
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYD 68
Query: 261 IEGRTIDVRY 290
+G + V +
Sbjct: 69 YDGYRLRVEF 78
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +3
Query: 42 GRENAQQSGRE----KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIV 203
GR N + S R +T +++ NL V+WQ +++ + G+V +A+ + +V
Sbjct: 97 GRYNEKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVV 156
Query: 204 RFHKEWDAERAIKMFDRTRIEGRTI 278
F D + AI+ D T + GR I
Sbjct: 157 EFASLSDMKTAIEKLDDTELNGRRI 181
>BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p
protein.
Length = 350
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +3
Query: 42 GRENAQQSGRE----KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIV 203
GR N + S R +T +++ NL V+WQ +++ + G+V +A+ + +V
Sbjct: 97 GRYNEKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVV 156
Query: 204 RFHKEWDAERAIKMFDRTRIEGRTI 278
F D + AI+ D T + GR I
Sbjct: 157 EFASLSDMKTAIEKLDDTELNGRRI 181
>BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p
protein.
Length = 350
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +3
Query: 42 GRENAQQSGRE----KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIV 203
GR N + S R +T +++ NL V+WQ +++ + G+V +A+ + +V
Sbjct: 97 GRYNEKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVV 156
Query: 204 RFHKEWDAERAIKMFDRTRIEGRTI 278
F D + AI+ D T + GR I
Sbjct: 157 EFASLSDMKTAIEKLDDTELNGRRI 181
>AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p
protein.
Length = 350
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +3
Query: 42 GRENAQQSGRE----KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIV 203
GR N + S R +T +++ NL V+WQ +++ + G+V +A+ + +V
Sbjct: 97 GRYNEKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVV 156
Query: 204 RFHKEWDAERAIKMFDRTRIEGRTI 278
F D + AI+ D T + GR I
Sbjct: 157 EFASLSDMKTAIEKLDDTELNGRRI 181
>AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC,
isoform C protein.
Length = 350
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +3
Query: 42 GRENAQQSGRE----KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIV 203
GR N + S R +T +++ NL V+WQ +++ + G+V +A+ + +V
Sbjct: 97 GRYNEKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVV 156
Query: 204 RFHKEWDAERAIKMFDRTRIEGRTI 278
F D + AI+ D T + GR I
Sbjct: 157 EFASLSDMKTAIEKLDDTELNGRRI 181
>AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA,
isoform A protein.
Length = 350
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +3
Query: 42 GRENAQQSGRE----KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIV 203
GR N + S R +T +++ NL V+WQ +++ + G+V +A+ + +V
Sbjct: 97 GRYNEKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVV 156
Query: 204 RFHKEWDAERAIKMFDRTRIEGRTI 278
F D + AI+ D T + GR I
Sbjct: 157 EFASLSDMKTAIEKLDDTELNGRRI 181
>X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing
protein protein.
Length = 376
Score = 37.1 bits (82), Expect = 0.058
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFHKEWDAERAIKMF 248
+T +++ NL V+WQ +++ + G+V +A+ + +V F D + AI+
Sbjct: 117 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKL 176
Query: 249 DRTRIEGRTI 278
D T + GR I
Sbjct: 177 DDTELNGRRI 186
>AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB,
isoform B protein.
Length = 329
Score = 37.1 bits (82), Expect = 0.058
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 75 KTSDMVMISNLPPSVTWQLIREKFSECGDVKFAET--TGPDTAIVRFHKEWDAERAIKMF 248
+T +++ NL V+WQ +++ + G+V +A+ + +V F D + AI+
Sbjct: 117 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKL 176
Query: 249 DRTRIEGRTI 278
D T + GR I
Sbjct: 177 DDTELNGRRI 186
>AY113495-1|AAM29500.1| 330|Drosophila melanogaster RE53017p
protein.
Length = 330
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP ++T ++IRE F CG++ + + +R+ +E +RAI
Sbjct: 236 VFVGGLPENITEEVIREIFESCGEITTLRMSKKNFCHIRYRQEGAIDRAI 285
>AY071251-1|AAL48873.1| 330|Drosophila melanogaster RE29010p
protein.
Length = 330
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP ++T ++IRE F CG++ + + +R+ +E +RAI
Sbjct: 236 VFVGGLPENITEEVIREIFESCGEITTLRMSKKNFCHIRYRQEGAIDRAI 285
>AE014296-2206|AAN11866.1| 430|Drosophila melanogaster CG10948-PA,
isoform A protein.
Length = 430
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP ++T ++IRE F CG++ + + +R+ +E +RAI
Sbjct: 229 VFVGGLPENITEEVIREIFESCGEITTLRMSKKNFCHIRYRQEGAIDRAI 278
>AE014296-2205|AAN11865.1| 437|Drosophila melanogaster CG10948-PB,
isoform B protein.
Length = 437
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP ++T ++IRE F CG++ + + +R+ +E +RAI
Sbjct: 236 VFVGGLPENITEEVIREIFESCGEITTLRMSKKNFCHIRYRQEGAIDRAI 285
>AE014296-2204|AAF49873.2| 804|Drosophila melanogaster CG10948-PC,
isoform C protein.
Length = 804
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 90 VMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
V + LP ++T ++IRE F CG++ + + +R+ +E +RAI
Sbjct: 236 VFVGGLPENITEEVIREIFESCGEITTLRMSKKNFCHIRYRQEGAIDRAI 285
>AY061430-1|AAL28978.1| 474|Drosophila melanogaster LD35981p
protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.18
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 60 QSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
++ K +++SNL +VT IRE FS+ G V A P TA V + AE+A+
Sbjct: 358 RTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVRPGTAEVIYKSLEHAEKAV 417
Query: 240 KMFDRTRIE 266
+ + +
Sbjct: 418 DTYHHRQFD 426
>AE014298-2767|AAF48885.2| 474|Drosophila melanogaster CG6961-PA
protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.18
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 60 QSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
++ K +++SNL +VT IRE FS+ G V A P TA V + AE+A+
Sbjct: 358 RTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVRPGTAEVIYKSLEHAEKAV 417
Query: 240 KMFDRTRIE 266
+ + +
Sbjct: 418 DTYHHRQFD 426
>AE014298-2765|AAF48882.2| 474|Drosophila melanogaster CG18259-PA
protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.18
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 60 QSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFAETTGPDTAIVRFHKEWDAERAI 239
++ K +++SNL +VT IRE FS+ G V A P TA V + AE+A+
Sbjct: 358 RTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVRPGTAEVIYKSLEHAEKAV 417
Query: 240 KMFDRTRIE 266
+ + +
Sbjct: 418 DTYHHRQFD 426
>AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p
protein.
Length = 154
Score = 33.9 bits (74), Expect = 0.54
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +3
Query: 21 SMPNQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFA-------ET 179
S +Q + ++Q + S + + NL T + I E FS CGDV+ +
Sbjct: 9 SYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKYKK 68
Query: 180 TGPDTAIVRFHKEWDAERAIKMFDRTRIEGRTIDV 284
T V ++ +AE A++ + TR++ R I V
Sbjct: 69 TPCGFCFVEYYVRSEAEAAMRFVNGTRLDDRLIRV 103
>AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding
protein 20 protein.
Length = 154
Score = 33.9 bits (74), Expect = 0.54
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +3
Query: 21 SMPNQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFA-------ET 179
S +Q + ++Q + S + + NL T + I E FS CGDV+ +
Sbjct: 9 SYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKYKK 68
Query: 180 TGPDTAIVRFHKEWDAERAIKMFDRTRIEGRTIDV 284
T V ++ +AE A++ + TR++ R I V
Sbjct: 69 TPCGFCFVEYYVRSEAEAAMRFVNGTRLDDRLIRV 103
>AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-PA
protein.
Length = 154
Score = 33.9 bits (74), Expect = 0.54
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +3
Query: 21 SMPNQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKFA-------ET 179
S +Q + ++Q + S + + NL T + I E FS CGDV+ +
Sbjct: 9 SYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKYKK 68
Query: 180 TGPDTAIVRFHKEWDAERAIKMFDRTRIEGRTIDV 284
T V ++ +AE A++ + TR++ R I V
Sbjct: 69 TPCGFCFVEYYVRSEAEAAMRFVNGTRLDDRLIRV 103
>AY118842-1|AAM50702.1| 435|Drosophila melanogaster GM13065p
protein.
Length = 435
Score = 31.1 bits (67), Expect = 3.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 33 QSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECGDVKF 170
+ +G+ QQ + + + +L S T + +RE FS CG++ +
Sbjct: 243 EKFGQAKDQQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDY 288
>BT010058-1|AAQ22527.1| 865|Drosophila melanogaster LD15974p
protein.
Length = 865
Score = 30.7 bits (66), Expect = 5.0
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 NMAAVSMPNQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKF 170
++++ +P QS A + + +SN+P +R F + G ++ F
Sbjct: 351 SLSSALVPAQSVAAVAAASLDAKSQPKRLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIF 410
Query: 171 AETTGPDTAIVRFHKEWDAERAIKMFDRTRIEGRTIDV 284
E V F DAERA + T +EGR I+V
Sbjct: 411 NERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEV 448
>AY118678-1|AAM50538.1| 582|Drosophila melanogaster AT08247p
protein.
Length = 582
Score = 30.7 bits (66), Expect = 5.0
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 NMAAVSMPNQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKF 170
++++ +P QS A + + +SN+P +R F + G ++ F
Sbjct: 171 SLSSALVPAQSVAAVAAASLDAKSQPKRLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIF 230
Query: 171 AETTGPDTAIVRFHKEWDAERAIKMFDRTRIEGRTIDV 284
E V F DAERA + T +EGR I+V
Sbjct: 231 NERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEV 268
>AE014296-1825|AAF50154.2| 849|Drosophila melanogaster CG32062-PB,
isoform B protein.
Length = 849
Score = 30.7 bits (66), Expect = 5.0
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 NMAAVSMPNQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKF 170
++++ +P QS A + + +SN+P +R F + G ++ F
Sbjct: 409 SLSSALVPAQSVAAVAAASLDAKSQPKRLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIF 468
Query: 171 AETTGPDTAIVRFHKEWDAERAIKMFDRTRIEGRTIDV 284
E V F DAERA + T +EGR I+V
Sbjct: 469 NERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEV 506
>AE014296-1824|AAF50153.2| 881|Drosophila melanogaster CG32062-PD,
isoform D protein.
Length = 881
Score = 30.7 bits (66), Expect = 5.0
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 NMAAVSMPNQSYGRENAQQSGREKTSDMVMISNLPPSVTWQLIREKFSECG-----DVKF 170
++++ +P QS A + + +SN+P +R F + G ++ F
Sbjct: 409 SLSSALVPAQSVAAVAAASLDAKSQPKRLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIF 468
Query: 171 AETTGPDTAIVRFHKEWDAERAIKMFDRTRIEGRTIDV 284
E V F DAERA + T +EGR I+V
Sbjct: 469 NERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEV 506
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,746,484
Number of Sequences: 53049
Number of extensions: 790940
Number of successful extensions: 1709
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7782581448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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