Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_F07_e54_11.seq
         (1485 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    52   2e-06
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    52   2e-06
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...    42   0.003

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 26/69 (37%), Positives = 35/69 (50%)
 Frame = +1

Query: 100 NYDLGNGVLRFXKXRMYHXKAIYKFAGXXXXXXXXXXXXTXXXKQIGGEKNGGXRTVLLX 279
           N  L  G+LR+ K +MY  +A+Y+                   K+IGG KNGG RTV L 
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 280 SRKSFYPTQ 306
             K+ YPT+
Sbjct: 83  KSKASYPTK 91



 Score = 41.5 bits (93), Expect = 0.003
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 341 FSXHVRRTRPNLTPGXVCILLAGRH 415
           FS H R TR NLTPG V ILLAGRH
Sbjct: 103 FSEHKRNTRRNLTPGTVLILLAGRH 127


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 26/69 (37%), Positives = 35/69 (50%)
 Frame = +1

Query: 100 NYDLGNGVLRFXKXRMYHXKAIYKFAGXXXXXXXXXXXXTXXXKQIGGEKNGGXRTVLLX 279
           N  L  G+LR+ K +MY  +A+Y+                   K+IGG KNGG RTV L 
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 280 SRKSFYPTQ 306
             K+ YPT+
Sbjct: 83  KSKASYPTK 91



 Score = 41.5 bits (93), Expect = 0.003
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 341 FSXHVRRTRPNLTPGXVCILLAGRH 415
           FS H R TR NLTPG V ILLAGRH
Sbjct: 103 FSEHKRNTRRNLTPGTVLILLAGRH 127


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 341 FSXHVRRTRPNLTPGXVCILLAGRH 415
           FS H R TR NLTPG V ILLAGRH
Sbjct: 84  FSEHKRNTRRNLTPGTVLILLAGRH 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,784,211
Number of Sequences: 53049
Number of extensions: 234687
Number of successful extensions: 207
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8249942736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)