Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_F06_e46_12.seq
         (1519 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    26   3.3  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    25   5.7  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   7.6  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 180 SLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPY 287
           SLT V ++ +   PC  P  PE  E+  E S AG Y
Sbjct: 484 SLT-VDIEMLCSCPCEHPSDPEYRERADECSNAGTY 518


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 25.0 bits (52), Expect = 5.7
 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +3

Query: 123  EVPIHQN-MAPIPISIPAGASLTP 191
            +VP++Q  +API + IP G+ L P
Sbjct: 1076 DVPLNQGCLAPIEVIIPPGSILDP 1099


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 6/102 (5%)
 Frame = +3

Query: 27  PNVSPTIRYQYMYSPYESH--KTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVSL 200
           P +S  I +   +  Y  H    +      ++QP  P +Q   P  +      S      
Sbjct: 343 PLLSMGISFPIFFPTYWPHYWNRFTQSTAMHNQPPPPPYQPPQPYSLMASVAPSYGLPQQ 402

Query: 201 QHV----QLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYSQPS 314
           Q+     ++  C C +     E +   SG G   +  +S+PS
Sbjct: 403 QNQCPIHRIQHCTCMLQNNARESISPASGTGMSPSYPHSEPS 444


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 867,084
Number of Sequences: 2352
Number of extensions: 15473
Number of successful extensions: 68
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 178001010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)