Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_F05_e38_11.seq
         (1564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.38 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.87 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   6.1  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   6.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   6.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +3

Query: 552  DVDHAWMKSVKQKGSNNNLKILPRILFENWQPSDLKAFFMEPTSHSEQKAFIEEIKKTCK 731
            D+D+ + K V    S   +K+L  I    W  S    +         + AFI  +    +
Sbjct: 2375 DIDNEFYKKVVSYKSRG-VKVL--IALGGWNDSAGNKYSRLVNDPQARAAFIAHVLAFIE 2431

Query: 732  QWKFDGL 752
            +W FDGL
Sbjct: 2432 EWNFDGL 2438



 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +3

Query: 639  WQPSDLKAFFMEPTSHSEQKAFIEEIKKTCKQWKFDGL 752
            W  S    +     + + +  FI+ + +  ++W FDGL
Sbjct: 1478 WNDSQGDKYSRLVNNPAARARFIKHVLQFLEKWNFDGL 1515


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.8 bits (54), Expect = 0.87
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +3

Query: 552 DVDHAWMKSVKQ-KGSNNNLKILPRILFENWQPSDLKAFFMEPTSHSEQKAFIEEIKKTC 728
           DV+   +K     K  N NLK L  +    W    +    M  +S S +  FI+ + +  
Sbjct: 73  DVNQGNLKKFNALKLKNPNLKTL--VAIGGWNEGSVNYSKMAASS-SLRAVFIKSVVEFV 129

Query: 729 KQWKFDG 749
           K W FDG
Sbjct: 130 KTWGFDG 136


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 472 QSLITSHLFGYKLRDSHQIFT 534
           Q+ I S+LF   L  ++Q+FT
Sbjct: 40  QNYINSYLFSLSLAQNNQLFT 60


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
 Frame = +2

Query: 47  SPGLQXIRHEVYALMFLALNS*ILNSKYEICVYSNYTIRISENDEMY*N----YIASDFS 214
           S GL  I +E+Y    LAL     N      +Y NYT+     DE+       Y+     
Sbjct: 322 SEGLYAI-NEIYDNALLALLDDYWNEYIPPILYYNYTVDRDLQDEVSQKIRKYYLGEKKL 380

Query: 215 SECVFRYIITAF 250
           S+  FR ++  F
Sbjct: 381 SKKTFRELVAMF 392


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
 Frame = +2

Query: 47  SPGLQXIRHEVYALMFLALNS*ILNSKYEICVYSNYTIRISENDEMY*N----YIASDFS 214
           S GL  I +E+Y    LAL     N      +Y NYT+     DE+       Y+     
Sbjct: 322 SEGLYAI-NEIYDNALLALLDDYWNEYIPPILYYNYTVDRDLQDEVSQKIRKYYLGEKKL 380

Query: 215 SECVFRYIITAF 250
           S+  FR ++  F
Sbjct: 381 SKKTFRELVAMF 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,647
Number of Sequences: 336
Number of extensions: 5446
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47115500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)