Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_F05_e38_11.seq
         (1564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    26   2.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    26   2.6  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            25   5.9  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 330 EAPFAKDIMKYHATYHQDVATRNFNNAVLGYVTPW 434
           E  F KD++K  +T H  + T ++   VL  + PW
Sbjct: 225 ELYFVKDVLKEASTIHDGIGTPDW-RLVLCLLVPW 258


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 330 EAPFAKDIMKYHATYHQDVATRNFNNAVLGYVTPW 434
           E  F KD++K  +T H  + T ++   VL  + PW
Sbjct: 225 ELYFVKDVLKEASTIHDGIGTPDW-RLVLCLLVPW 258


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 406 TLSWAMLLHGITKAMR*LKHGHQSLITSHLFGYKLRDSHQIF 531
           T+SW  L    T   R L H H+ + +S   G K   +H+ F
Sbjct: 211 TVSWTELCKIATTMARGLTHLHEEIQSSRTDGLKPSIAHRDF 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,204,728
Number of Sequences: 2352
Number of extensions: 22105
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 184096935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)