Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_F03_e22_11.seq
(1599 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 215 2e-54
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 210 8e-53
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 176 1e-42
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 174 6e-42
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 171 3e-41
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 164 5e-39
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 163 1e-38
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 162 2e-38
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 161 6e-38
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 159 2e-37
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 141 4e-32
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 138 4e-31
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 135 3e-30
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 133 1e-29
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 124 7e-27
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 121 6e-26
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 107 1e-21
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 85 4e-15
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 79 4e-13
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 77 1e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 75 7e-12
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 74 1e-11
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 68 6e-10
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 65 6e-09
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 61 9e-08
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 57 1e-06
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 53 2e-05
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 52 3e-05
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 42 0.045
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 42 0.060
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 38 0.56
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.56
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 38 0.74
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 38 0.98
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 38 0.98
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 3.9
UniRef50_Q5KIH1 Cluster: Putative uncharacterized protein; n=1; ... 36 3.9
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 35 5.2
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 5.2
UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11; Eur... 34 9.1
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 215 bits (526), Expect = 2e-54
Identities = 104/170 (61%), Positives = 121/170 (71%)
Frame = +2
Query: 134 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 313
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN VH ++ KN RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 314 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXX 493
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK W
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 494 XXXXXXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQAXI 643
LV ++GH +E++PELPLVV D V G KTK+A +
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 210 bits (513), Expect = 8e-53
Identities = 104/173 (60%), Positives = 120/173 (69%)
Frame = +2
Query: 128 MSLSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKE 307
MSL ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 308 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXX 487
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 488 XXXXXXXXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQAXIF 646
LVQ++GH+++ + E PLVVSD V KTKQA IF
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIF 173
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 176 bits (429), Expect = 1e-42
Identities = 85/156 (54%), Positives = 101/156 (64%)
Frame = +2
Query: 143 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 322
+RP VSV S G ++PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 323 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXX 502
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK W
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 503 XXXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNV 610
L+ ARGH + ++ E+PLV++ V
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSEV 157
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 174 bits (423), Expect = 6e-42
Identities = 88/168 (52%), Positives = 106/168 (63%)
Frame = +2
Query: 143 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 322
ARP VSVYS S+ V G + PLP VF APIR D+V VH +M+KN+RQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVG-TCPLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 323 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXX 502
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 503 XXXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQAXIF 646
LV +RGH + +PE+PLVV D++ G KTK+A F
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAF 169
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 171 bits (417), Expect = 3e-41
Identities = 86/171 (50%), Positives = 104/171 (60%)
Frame = +2
Query: 134 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 313
++ ARP+VSV+ A +S+PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 314 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXX 493
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 494 XXXXXXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQAXIF 646
LV ARGH + +PELPLV+S+ + +KT A F
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEF 171
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 164 bits (399), Expect = 5e-39
Identities = 80/166 (48%), Positives = 104/166 (62%)
Frame = +2
Query: 140 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 319
V RP+VSV+S +E G+++ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 320 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXX 499
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 500 XXXXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQA 637
LV +RGH VE +PELPLV+ D + KT+ A
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDA 166
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 163 bits (396), Expect = 1e-38
Identities = 82/171 (47%), Positives = 101/171 (59%)
Frame = +2
Query: 134 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 313
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVG-EVEIPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 314 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXX 493
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK W
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 494 XXXXXXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQAXIF 646
LV ARGH + + E+PLV S+++ KTK A F
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKF 170
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 162 bits (394), Expect = 2e-38
Identities = 82/167 (49%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Frame = +2
Query: 149 PLVSVYS-EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 325
PLVSV+S + S V +PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 326 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXX 505
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 506 XXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQAXIF 646
LV ARGH + ++P++PLVV D + KT A F
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNF 171
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 161 bits (390), Expect = 6e-38
Identities = 75/98 (76%), Positives = 83/98 (84%)
Frame = +2
Query: 161 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 340
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPT-DTQIRLPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 341 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 454
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 223
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 159 bits (386), Expect = 2e-37
Identities = 80/170 (47%), Positives = 103/170 (60%)
Frame = +2
Query: 146 RPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 325
RP VSV++ GA+L +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 326 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXX 505
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 506 XXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQAXIFXET 655
+V +RGH +E + E+P+VV D + +KTK A ET
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLET 172
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 141 bits (342), Expect = 4e-32
Identities = 72/162 (44%), Positives = 96/162 (59%)
Frame = +2
Query: 152 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 331
L +VY+ + ++P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 332 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXX 511
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K W
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 512 XXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQA 637
LV ARGH ++ +PELPLVVSD+V KTK+A
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEA 167
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 138 bits (334), Expect = 4e-31
Identities = 72/156 (46%), Positives = 85/156 (54%)
Frame = +2
Query: 170 EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGR 349
E V +L LP VF PIR DLV + RQPY VSK AG Q SAESWGTGR
Sbjct: 9 EADGVTVKKTLDLPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGR 68
Query: 350 AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXXXXXXX 529
A+AR+PRV+GGGT R+GQGAF N CR GRM PTK
Sbjct: 69 AIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAAS 128
Query: 530 XXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQA 637
LV+ARGH + + LP++VSD++ KTK A
Sbjct: 129 AQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDA 164
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 135 bits (327), Expect = 3e-30
Identities = 75/166 (45%), Positives = 96/166 (57%), Gaps = 1/166 (0%)
Frame = +2
Query: 143 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 322
+RP V++Y + + LP VF APIR D+V+ V+ + SKN RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 323 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXX 502
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 503 XXXXXXXXXXXXXLVQARGHIVEKIPELPLVV-SDNVXGXHKTKQA 637
LV ARGH + +P++PLVV S ++ KTKQA
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQA 168
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 133 bits (322), Expect = 1e-29
Identities = 69/158 (43%), Positives = 89/158 (56%)
Frame = +2
Query: 158 SVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESW 337
+VYS ++ L +P VF + IR D+V VH +M KN RQ Y VS AG TSA SW
Sbjct: 5 NVYSCNKNIID--KLKIPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSW 62
Query: 338 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXXX 517
GTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT W
Sbjct: 63 GTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSA 122
Query: 518 XXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTK 631
++ +RG+ V+ IPE+P V+ D++ KT+
Sbjct: 123 IASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEKIPKTR 160
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 124 bits (299), Expect = 7e-27
Identities = 59/110 (53%), Positives = 68/110 (61%)
Frame = +2
Query: 272 KNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 451
++ + V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 452 KPWXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQARGHIVEKIPELPLVVS 601
K W L+ ARGH V +PE+PLV+S
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVIS 131
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 121 bits (291), Expect = 6e-26
Identities = 62/166 (37%), Positives = 95/166 (57%)
Frame = +2
Query: 140 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 319
++R V+V +++ + +++ LP VF PIR ++V +V+V+++KNA+QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 320 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXX 499
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 500 XXXXXXXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQA 637
LVQARGH++ ++ E+P+VV D V +T+ A
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDA 164
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 107 bits (256), Expect = 1e-21
Identities = 67/164 (40%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Frame = +2
Query: 149 PLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSA 328
P V V+ VA LP P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQVA--ELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 329 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXX 508
SWG GRAVAR+PR G G GA+ N RGG M PT
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 509 XXXXXXXXXXXLVQARGHIVEKIPELPLVV-SDNVXGXHKTKQA 637
LV+ARGH + +P +PLVV +DNV KTK A
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVVDTDNVT---KTKDA 155
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 85.4 bits (202), Expect = 4e-15
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Frame = +2
Query: 197 SLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVR 376
++ LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+
Sbjct: 15 TVELPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVK 74
Query: 377 GGGTHRSGQGAFGNMCRGG-RMFAPTKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQA 553
G +G+ A GG + APT P V+
Sbjct: 75 GRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKE 133
Query: 554 RGHIVEKIPELPLVVSDNVXGXHKTKQAXIFXET 655
RGH+++ +P LP+VV D + +K ++ F ++
Sbjct: 134 RGHVIDDVPHLPVVVVDELKSLNKAREVREFFKS 167
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 78.6 bits (185), Expect = 4e-13
Identities = 54/161 (33%), Positives = 71/161 (44%)
Frame = +2
Query: 155 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 334
+ VY VA PL F+ PIRPDL+ ++S QP V + AG + S ES
Sbjct: 29 LKVYGIDGAYVADIEAPLHFL--EPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCES 86
Query: 335 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXX 514
+G G +ARIPR +G R G F RGGR P K
Sbjct: 87 FGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRS 143
Query: 515 XXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQA 637
V ARGH+VEK+P LP+VV + ++ K+A
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINRAKEA 184
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 77.0 bits (181), Expect = 1e-12
Identities = 35/97 (36%), Positives = 51/97 (52%)
Frame = +2
Query: 308 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXX 487
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 488 XXXXXXXXXXXXXXXXXXLVQARGHIVEKIPELPLVV 598
LV +RGH ++ + P+++
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMII 155
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 74.5 bits (175), Expect = 7e-12
Identities = 46/160 (28%), Positives = 73/160 (45%)
Frame = +2
Query: 155 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 334
++VYS K ++ + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITE--EIELPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 335 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXX 514
+G+GR A +PRV+G S + AF GGR P +
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 515 XXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQ 634
LV+ RGH V ++ ++P V+ D + TK+
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKE 156
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 73.7 bits (173), Expect = 1e-11
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 239 DLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 385
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 68.1 bits (159), Expect = 6e-10
Identities = 46/150 (30%), Positives = 62/150 (41%), Gaps = 2/150 (1%)
Frame = +2
Query: 191 GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG--TGRAVARI 364
G + LP VF P R DL+ + + + QP AG SA+S TG ARI
Sbjct: 13 GKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARI 72
Query: 365 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXL 544
R++GGG R G+ RGGR P K
Sbjct: 73 ARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKST 132
Query: 545 VQARGHIVEKIPELPLVVSDNVXGXHKTKQ 634
V RGHI++ I ELP+V+SD++ K +
Sbjct: 133 VAGRGHIIDGI-ELPIVISDDIESVSKASE 161
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 64.9 bits (151), Expect = 6e-09
Identities = 41/147 (27%), Positives = 63/147 (42%)
Frame = +2
Query: 206 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 385
LP +F P+R DL+ V ++ ++ QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 386 THRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQARGHI 565
SG+ A GGR+ P V+ARGH+
Sbjct: 82 --NSGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 566 VEKIPELPLVVSDNVXGXHKTKQAXIF 646
+ P+VV+D++ T + F
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEF 166
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.9 bits (141), Expect = 9e-08
Identities = 39/101 (38%), Positives = 53/101 (52%)
Frame = +2
Query: 152 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 331
+V VY E+ S+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGG--EKDSVVLPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 332 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 454
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 57.2 bits (132), Expect = 1e-06
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 1/163 (0%)
Frame = +2
Query: 161 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 340
V + K EV + LP VF RPD++ +++ + RQPY + +G S E+WG
Sbjct: 5 VLNLKGEVTE--EIELPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWG 62
Query: 341 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXXXX 520
G AR+PR + G + GGR P KP
Sbjct: 63 PGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAI 117
Query: 521 XXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQ-AXIF 646
LV+ R H+ E ELP VVS+ + +TK A +F
Sbjct: 118 AATANEELVRQRSHVFE--GELPKVVSNELESVKRTKDVAEVF 158
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 53.2 bits (122), Expect = 2e-05
Identities = 43/149 (28%), Positives = 62/149 (41%)
Frame = +2
Query: 206 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 385
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 386 THRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQARGHI 565
R Q GR P K LV RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 566 VEKIPELPLVVSDNVXGXHKTKQAXIFXE 652
++ E+P+VVSD+ KT++ E
Sbjct: 131 FDR-DEVPVVVSDDFEDLVKTQEVVSLLE 158
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 52.4 bits (120), Expect = 3e-05
Identities = 42/161 (26%), Positives = 65/161 (40%)
Frame = +2
Query: 155 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 334
V +YS E+ + LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGEMKG--EIDLPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 335 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXXXXXX 514
G ++R+PR+ GG A GG+ +
Sbjct: 63 TRPGLGISRMPRIAGGSRVVGIASAV-----GGKSAHSPRTTKNLYVKINDRERKMAKYS 117
Query: 515 XXXXXXXXXLVQARGHIVEKIPELPLVVSDNVXGXHKTKQA 637
V+ RGH ++ +LP+VV D V G +KTK A
Sbjct: 118 AIALTASVEAVKKRGHRFKEGLKLPIVVEDGVEGINKTKDA 158
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 41.9 bits (94), Expect = 0.045
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = +2
Query: 179 EVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSK-------EAGHQTSAESW 337
E G ++ LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 338 GTGRAVARIPRVRGGGT 388
G GR V+RI R G T
Sbjct: 101 GKGRGVSRIMRKAGQRT 117
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 41.5 bits (93), Expect = 0.060
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 554 RGHIVEKIPELPLVVSDNVXGXHKTKQAXIF 646
RG++V+ + E+PLVVSD + +KTKQA IF
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIF 35
Score = 40.7 bits (91), Expect = 0.10
Identities = 29/76 (38%), Positives = 36/76 (47%)
Frame = +3
Query: 657 IKAWSDVLKLYKSQRPACX*RENA*SXXXPTHRTPLSXYNKGQGXXLXAFX*IPXHXRXS 836
IKAWSDVLK+YKSQR + + + PL YNK QG +F IP +
Sbjct: 39 IKAWSDVLKVYKSQRLRAG-KGKMRNRRRLHRKGPLIIYNKDQG-LTRSFRNIPGVDMVN 96
Query: 837 T*TXXTFXXLXPGGHL 884
L PGGH+
Sbjct: 97 V-NKLNLLHLAPGGHV 111
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 38.3 bits (85), Expect = 0.56
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 551 ARGHIVEKIPELPLVVSDNVXGXHKTKQAXI 643
++GH + ++PELPLVV D V G KT++A +
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVL 32
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 38.3 bits (85), Expect = 0.56
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 453 LVGANIRPPRHMLPNAPCP 397
LVGANI PPRHMLP AP P
Sbjct: 106 LVGANILPPRHMLPKAPWP 124
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 37.9 bits (84), Expect = 0.74
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 191 GASLPLPFVFKAPIRPDLVNDVHVSMSKN 277
GAS +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
Score = 37.5 bits (83), Expect = 0.98
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 542 LVQARGHIVEKIPELPLVVSDNVXGXHKTKQA 637
L+ ARGH VE +PE+PLVV D+ KT +A
Sbjct: 139 LLLARGHRVEGVPEVPLVVDDSASSIKKTAKA 170
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 37.5 bits (83), Expect = 0.98
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = -1
Query: 432 PPRHMLPNAPCPDLWV--PPPRTRGIRATARPVPQDSALV**PASLLTQ*GWRAFFDIDT 259
PP LP P PD +V PPP+ G A PVP L P L + G A F +
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVPTLGELA--PLLPLAEAGAAATFSV-- 407
Query: 258 WTSLTRSGLMGALNTNGRGSEAPATTSLFS-EYTDTKGRATDR 133
W + + G L G A + F E +GRATD+
Sbjct: 408 WPAGCSVRVEGQLLIRLEGLVAFSGNLTFQPEMKRFRGRATDK 450
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 37.5 bits (83), Expect = 0.98
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 551 ARGHIVEKIPELPLVVSDNVXGXHKTKQA 637
ARGH +E +PELPLV+ D+ KT A
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAA 30
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 3.9
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 356 ARIPRVRGGGTHRSGQGAFGNMCRGG 433
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q5KIH1 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1015
Score = 35.5 bits (78), Expect = 3.9
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 263 IRGHH*RGQV*WAP*IQTGGGAKPLRRPHSSPNTPTLKVGLL 138
+R H + + WA +Q G+KP RP+S PNTP + G+L
Sbjct: 715 VREHAIKAERKWAV-LQAPAGSKPTSRPNSLPNTPQQRFGVL 755
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 35.1 bits (77), Expect = 5.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 542 LVQARGHIVEKIPELPLVVSDNVXGXHKT 628
LV ARGH +E + ELPLV+ D+ KT
Sbjct: 21 LVMARGHRIESVLELPLVIGDSTKSVDKT 49
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 5.2
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 266 MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 436
+++ A ++E G A+SW TGRA A + R R GG R A N G R
Sbjct: 18 LARAAASSVAANREGGG--GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11;
Eurotiomycetidae|Rep: Similarity to other proteins -
Aspergillus niger
Length = 1372
Score = 34.3 bits (75), Expect = 9.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 444 ANIRPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 325
AN P + P + P + VPPP + ATA P P +A
Sbjct: 635 ANQTPNNYPQPTSTTPSVQVPPPAAAAVAATASPAPAPAA 674
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 911,176,856
Number of Sequences: 1657284
Number of extensions: 15180110
Number of successful extensions: 41229
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 38872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41162
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 172603615300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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