BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_F02_e14_12.seq
(1593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 31 8.8
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 31 8.8
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 31 8.8
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 31 8.8
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 31 8.8
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 31 8.8
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 31 8.8
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 31 8.8
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 31 8.8
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 31 8.8
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nuclear
targeting subunit protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 8.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 1124 NXAPPPTAPFKGXDXXG*GPGXPAXXGGPXXG 1029
N PPP PF+G G G P GGP G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGG 744
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,386,843
Number of Sequences: 237096
Number of extensions: 2967470
Number of successful extensions: 4959
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4954
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23793408568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -