Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_F01_e6_11.seq
(1607 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 308 4e-82
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 258 2e-67
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 238 3e-61
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 206 2e-51
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 204 5e-51
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 202 2e-50
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 181 4e-44
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 174 6e-42
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 172 3e-41
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 166 1e-39
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 161 4e-38
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 161 6e-38
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 140 9e-32
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 138 5e-31
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 134 8e-30
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 128 5e-28
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 124 9e-27
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 120 1e-25
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 119 2e-25
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 118 4e-25
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 116 1e-24
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 116 2e-24
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 115 4e-24
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 111 7e-23
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 110 9e-23
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 108 4e-22
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 107 6e-22
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 104 8e-21
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 103 1e-20
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 99 3e-19
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 96 3e-18
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 91 8e-17
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 87 2e-15
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 82 5e-14
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 64 7e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 58 6e-07
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 56 3e-06
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 54 1e-05
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 51 1e-04
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 50 2e-04
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 50 2e-04
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 49 4e-04
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 48 5e-04
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 48 5e-04
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 48 7e-04
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 48 0.001
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 48 0.001
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 45 0.005
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 44 0.009
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 43 0.020
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 43 0.026
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 42 0.046
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 42 0.060
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 42 0.060
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 41 0.080
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 41 0.11
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 40 0.14
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 40 0.18
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 40 0.18
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 40 0.24
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 39 0.43
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 39 0.43
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.56
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 38 0.56
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 38 0.74
UniRef50_UPI0000D573AC Cluster: PREDICTED: similar to CG14476-PB... 38 0.98
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 38 0.98
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 37 1.3
UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 37 1.7
UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 37 1.7
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 36 2.3
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 36 3.0
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 36 4.0
UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;... 35 6.9
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 35 6.9
UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1; Lentisph... 34 9.2
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 308 bits (755), Expect = 4e-82
Identities = 147/186 (79%), Positives = 165/186 (88%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 313
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 312 IRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVS 133
IRRV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVS
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 132 EKTTVV 115
EKTTVV
Sbjct: 181 EKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 258 bits (633), Expect = 2e-67
Identities = 124/192 (64%), Positives = 157/192 (81%), Gaps = 3/192 (1%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQ--LKVEKW 499
MK I++NQ V IPE++ + +K R V VKGPRG L+R+F H+ V++ ++ ++ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 498 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGE 319
+G++KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E +++EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 318 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 139
KYIRRV+M PGV S QKDELI+EGN +E VS+SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 138 VSEKTTV-VADE 106
VSEK TV ADE
Sbjct: 181 VSEKGTVQQADE 192
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 238 bits (583), Expect = 3e-61
Identities = 111/189 (58%), Positives = 148/189 (78%), Gaps = 1/189 (0%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RQLKVEKWF 496
MK I+A++ ++IPE +TV V +++VTV+GPRG L RNFKHL +D +++ R+L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 495 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 316
G+++ +AA+RT SHV+N+I GVTKG++YKMR VYAHFPIN T NT IEIRNFLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 315 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 136
+R+V M GVT++ S K KDEL+++GN +E VS SAALI Q VKNKDIRKFLDG+YV
Sbjct: 121 KVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 180
Query: 135 SEKTTVVAD 109
S+K T+ D
Sbjct: 181 SDKGTITED 189
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 206 bits (502), Expect = 2e-51
Identities = 89/170 (52%), Positives = 126/170 (74%)
Frame = -3
Query: 627 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVRTVCSHV 448
+TV VK R V V GPRG L ++F H +VDI +V ++L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 447 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNS 268
ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 267 PKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 118
K KDE+++ GNSLE +S S A IQ + +K KD+RKFLDG+YVSE+ +
Sbjct: 154 EKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 204 bits (498), Expect = 5e-51
Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
MK I Q++++PE +TV +KSR+V V GPRG L +N KH+ V VN + +KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI--NCVTTEGNTIIEIRNFLGE 319
+K +AA+RTV S V+NMI GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 318 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 139
K IR V + GVT+ S KDE+++ GNS+EDVS +AA +QQ V+NKDIRKFLDG+Y
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
Query: 138 VSEKTTVVAD 109
VS K + D
Sbjct: 181 VSHKGFITED 190
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 202 bits (493), Expect = 2e-50
Identities = 98/184 (53%), Positives = 132/184 (71%)
Frame = -3
Query: 669 KQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGS 490
+ I ++ + IP+ +TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGS 61
Query: 489 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYI 310
+K A +R+V S + NMI GVT+GF+YKMR VYAHFPIN TE T++EIRNFLGE+
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 309 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSE 130
R +K PGVTV S KDE+I+EGNSLE+VS SAA I+Q V+NKDIRKFLDG+YVSE
Sbjct: 122 RVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSE 181
Query: 129 KTTV 118
+ +
Sbjct: 182 RGNI 185
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 181 bits (441), Expect = 4e-44
Identities = 87/179 (48%), Positives = 114/179 (63%)
Frame = -3
Query: 663 IVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKK 484
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDT-ISVAVWFPRGK 61
Query: 483 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
A RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR
Sbjct: 62 RNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRR 121
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
++ PGVT+ S KDELI+ G S+EDVS +AA I +S V NKD+RKFLDG YVS +
Sbjct: 122 IECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 174 bits (423), Expect = 6e-42
Identities = 86/190 (45%), Positives = 123/190 (64%), Gaps = 9/190 (4%)
Frame = -3
Query: 651 QKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPRQ--LKVEKW 499
+ V IPE + + + + + V GPRG L R F+H VDI + P++ + ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 498 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGE 319
+G++++ A VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGE
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGE 128
Query: 318 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 139
K R ++M GV V KDE+ +EGN +E VS SAA I + V+NKDIR+FLDG+Y
Sbjct: 129 KRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVY 186
Query: 138 VSEKTTVVAD 109
VSEK + D
Sbjct: 187 VSEKCLIEND 196
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 172 bits (418), Expect = 3e-41
Identities = 89/192 (46%), Positives = 125/192 (65%), Gaps = 10/192 (5%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 520
MK I+ + V IPE + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 519 QLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIE 340
++ V W +K+ V +V S + NMI+GVT G+++KM YAHFPI +E
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVE 120
Query: 339 IRNFLGEKYIRRVKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDI 163
I+NFLGEK IR +K PGVT+ N ++K+ L ++GN L +VS + ALI Q+ VKNKDI
Sbjct: 121 IKNFLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDI 180
Query: 162 RKFLDGLYVSEK 127
R+FLDG+YVSEK
Sbjct: 181 RQFLDGIYVSEK 192
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 166 bits (404), Expect = 1e-39
Identities = 73/126 (57%), Positives = 96/126 (76%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
MK + +N V P+ +T VK+R+V V GPRG LKR+F+HL +++ V QL+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 313
+KE+AA+RTVCSH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 312 IRRVKM 295
+R V +
Sbjct: 121 VRPVPL 126
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 161 bits (392), Expect = 4e-38
Identities = 79/160 (49%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
Frame = -3
Query: 576 VLKRNFKHLAVDIRMVNP---RQLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 406
V +++ KH+ +D R++ +++K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 405 MRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 226
MRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 225 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVADE 106
+ VS SAAL+ +T V+NKDIRKFLDG+Y + K TVV E
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVVKAE 251
Score = 34.7 bits (76), Expect = 6.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRN 562
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 161 bits (390), Expect = 6e-38
Identities = 77/183 (42%), Positives = 118/183 (64%), Gaps = 1/183 (0%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-QLKVEKWF 496
M I +K+KIP+++ + K+R ++ G G + R+F+ + IR + ++ + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 495 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 316
KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ + +EIRNFLGEK
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEK 120
Query: 315 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 136
IR++ M GV + + +KDE+ + G+ L VS +AA IQQS KNKD+RKFLDG+Y+
Sbjct: 121 RIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIYI 180
Query: 135 SEK 127
K
Sbjct: 181 IMK 183
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 140 bits (339), Expect = 9e-32
Identities = 75/175 (42%), Positives = 112/175 (64%)
Frame = -3
Query: 651 QKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAA 472
++++IPE + V V+ V VKGP+G L+R K+ V I ++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQI-FTEDGKVVIYKEFPRKKDVAI 67
Query: 471 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMA 292
VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKIL 125
Query: 291 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
PGVTV + E+ +EG E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 126 PGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 138 bits (333), Expect = 5e-31
Identities = 76/175 (43%), Positives = 110/175 (62%)
Frame = -3
Query: 651 QKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAA 472
++V+IPE + V V+ V VKGP+G L+R F + I + + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQI-FTEDGNVVIYKDFPRRKDVAI 67
Query: 471 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMA 292
RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKIL 125
Query: 291 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
PGVTV + E+I+EG E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 126 PGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 134 bits (323), Expect = 8e-30
Identities = 76/189 (40%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Frame = -3
Query: 687 KQSPNMKQIVANQKVKIPESLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRQL 514
K P M+ I+ + VK+PE T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 513 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIR 334
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 333 NFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKF 154
NFLGEK ++R +M G V ++KD ++IEG SL DVS SA I KN+D R F
Sbjct: 133 NFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVF 191
Query: 153 LDGLYVSEK 127
LDG++V+E+
Sbjct: 192 LDGIFVTER 200
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 128 bits (308), Expect = 5e-28
Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 8/186 (4%)
Frame = -3
Query: 669 KQIVANQKVKIPESLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRQLK 511
+ ++ + KIPE++ VKS +VT++ P+ L ++ HL +D N Q+
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 510 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRN 331
WFG++K LA + T+ V+NMI GVT G++YKM VY+HFPI +E +
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNG 122
Query: 330 FLGEKYIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKF 154
F+G K + V GV + N KDE+ IEG +LEDVS I Q T +K+KD+RKF
Sbjct: 123 FMGHKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKF 182
Query: 153 LDGLYV 136
LDG+YV
Sbjct: 183 LDGIYV 188
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 124 bits (298), Expect = 9e-27
Identities = 68/123 (55%), Positives = 85/123 (69%)
Frame = -3
Query: 486 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIR 307
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 306 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
+M GV S QKDELI+EGN E VS+SAALIQ++T V+N+DIRKF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 126 TTV 118
T+
Sbjct: 128 GTM 130
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 120 bits (289), Expect = 1e-25
Identities = 60/120 (50%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
Frame = -3
Query: 672 MKQIVANQKVKIPE---SLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RQLKVE 505
MK I + ++IPE ++ V +KSR + V G G L+R F+H+ VD+++V R++ VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 504 KWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFL 325
WFG K A +RTVCSH+ENMI GV + +QYK+R VYAHFPIN T + IEIRNFL
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 119 bits (287), Expect = 2e-25
Identities = 67/175 (38%), Positives = 106/175 (60%)
Frame = -3
Query: 651 QKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAA 472
++V+IP + V + ++TV GP+G L R+ + +D+ MV ++ V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 471 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMA 292
T+ +H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKII 121
Query: 291 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
GVTV DE+ I G E V ++AA I+ +T + +D R F DG+Y++E+
Sbjct: 122 EGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 118 bits (284), Expect = 4e-25
Identities = 68/173 (39%), Positives = 105/173 (60%)
Frame = -3
Query: 645 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVR 466
++IPE ++V + + T KGP+G ++R F + + I V ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIE-VREGEVVVDAESSRKEQKAMVG 67
Query: 465 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAPG 286
T SH++N+I GV++GF+ KM VYAHFP+ V EG T++ I NFLGEK R K+ G
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-G 124
Query: 285 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
T V +E+++ G + EDV +AA I+Q T +K D R F DG+Y+ +K
Sbjct: 125 ETKVK--VSGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 116 bits (280), Expect = 1e-24
Identities = 57/186 (30%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRQLKVEKWF 496
+K ++++IP+ + V +++ ++ VKGP+G + ++F + A IR+ +N ++ +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 495 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 316
+++ A + ++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK
Sbjct: 63 ADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEK 120
Query: 315 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 136
IRR K+ PGV V + +++++EG+ + +V+ +AA I+ ST + D R F DG+Y+
Sbjct: 121 NIRRAKILPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYI 177
Query: 135 SEKTTV 118
+K +
Sbjct: 178 YKKEVI 183
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 116 bits (279), Expect = 2e-24
Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 1/169 (0%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRQLKVEKWF 496
M+ + + V IPE + VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 495 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK 316
+KK+ A V T+ S + NMI GVTKG++YK++ VYAHFP++ + IIE NFLGE+
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMSLKVEKDKIIIE--NFLGER 117
Query: 315 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 169
R + PG V +KD++I+EG L+ V+ +AA I +T ++ K
Sbjct: 118 GKRIAGIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLATHLRGK 163
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 115 bits (276), Expect = 4e-24
Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 2/184 (1%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRQLKVEKW 499
MK ++ + +P+ + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 498 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGE 319
+ +K A VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + +EI N G
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGL 120
Query: 318 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 139
K I + V V + K E+I+ +E + ++LIQ ++ NKD R F+DG+Y
Sbjct: 121 KRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIY 180
Query: 138 VSEK 127
++ K
Sbjct: 181 LASK 184
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 111 bits (266), Expect = 7e-23
Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)
Frame = -3
Query: 666 QIVANQKVKIPESLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRQLKVEK 502
++ + V++PE + + ++ R T+K GP+G R K+ V I V +++V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIE-VGDGKVRVYT 75
Query: 501 WFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLG 322
KK A V T H+EN+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+G
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIG 133
Query: 321 EKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGL 142
EK+ RR K+ V S + ++ + G +E+ +AA ++Q+T +K KD R F DG+
Sbjct: 134 EKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGI 190
Query: 141 YVSEK 127
Y+ +K
Sbjct: 191 YIVKK 195
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 110 bits (265), Expect = 9e-23
Identities = 61/187 (32%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
M+ + ++ IPE++ V ++ ++ V GP+G ++R F H + + VN ++ +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFA 59
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEK- 316
+++E + T SH++NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKA 117
Query: 315 -YIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV--KNKDIRKFLD 148
I+ + V V + K + E+++E E A++I+QST K KD R+F D
Sbjct: 118 PIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTD 177
Query: 147 GLYVSEK 127
G+++ K
Sbjct: 178 GIWLYYK 184
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 108 bits (260), Expect = 4e-22
Identities = 62/160 (38%), Positives = 99/160 (61%)
Frame = -3
Query: 606 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVRTVCSHVENMIKGV 427
R++ VKG G ++F+ + V IR ++ + ++ K++LA + T S V N+ +GV
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIR-IDGSSVVLKAEGTRKRDLAILNTARSIVRNLCEGV 66
Query: 426 TKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 247
G+ K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + +++
Sbjct: 67 GVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGEDV 121
Query: 246 IIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
I+ G+ L DVS +AA ++Q T VKNKD R FLDG+YV EK
Sbjct: 122 IVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 107 bits (258), Expect = 6e-22
Identities = 62/174 (35%), Positives = 103/174 (59%)
Frame = -3
Query: 648 KVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 469
+V+IPE +TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 468 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAP 289
T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R +
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMG 128
Query: 288 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
V+ PK +D +++ G D++ +AA I+ +T VKNKD R FLDG+YV EK
Sbjct: 129 NTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 104 bits (249), Expect = 8e-21
Identities = 61/174 (35%), Positives = 99/174 (56%)
Frame = -3
Query: 648 KVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 469
+++IPE + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 468 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAP 289
T SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR +
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-H 120
Query: 288 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
G T V +EL + G +E V +AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 121 GDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 103 bits (248), Expect = 1e-20
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Frame = -3
Query: 648 KVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 469
K+ +PE +T V VTV L R F+H +++R + +L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRD-SSGELEVFVNLPRKKEKALA 68
Query: 468 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAP 289
T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Query: 288 --GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
V + K ++ + G E V +AA I++S +KN+D R F DG+Y+ K
Sbjct: 126 WSPAEVEVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 99.1 bits (236), Expect = 3e-19
Identities = 59/185 (31%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Frame = -3
Query: 663 IVANQKVKIPESLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKW 499
IV ++VKI + + + + R VTVKGP+G + + F + V + V ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYL-WVEDDEVVIAAT 75
Query: 498 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGE 319
++++ A + + +++ENM KGVT+G +YK++ VY+HFP + + I NF+GE
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGE 135
Query: 318 KYIRRVKMA-PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGL 142
R ++ P T V Q ++I+ G E V +AA ++Q+T +K++D R F DG+
Sbjct: 136 NVPRVAEIVDPENTEV--IVQGQDIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGI 193
Query: 141 YVSEK 127
Y+ EK
Sbjct: 194 YIVEK 198
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 95.9 bits (228), Expect = 3e-18
Identities = 56/173 (32%), Positives = 100/173 (57%)
Frame = -3
Query: 645 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVR 466
++IP+ + V + ++++ L++ F V + +V ++K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 465 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAPG 286
T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G T++ I NF GE+ R ++ G
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-G 125
Query: 285 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 127
T V+ + D L + G S +DV +AA I+++T +K D R F DG+Y+ K
Sbjct: 126 ETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLISK 176
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 91.1 bits (216), Expect = 8e-17
Identities = 55/168 (32%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKV 508
M+ + + ++V+IP+ ++V ++ +V VKGP G + + FK+ V + + ++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPV-VMSLQDGKIVM 59
Query: 507 EKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNF 328
E + K+E A + T ++NM GVT+G++YK++ +Y HFP+ V +GN ++ I NF
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENF 117
Query: 327 LGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQST 184
LG K + + GV V K K++++IEG E VS+ AA +Q +T
Sbjct: 118 LGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAAT 163
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 86.6 bits (205), Expect = 2e-15
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLK--VEKW 499
MK I++NQ V IP ++ + +K R V VKGP+G L R+F H+ V++ ++ + K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 498 FGSKKELAAVRTVCSHVENMIKGVTKG 418
+G++KELA V T+CS V+N IK VT G
Sbjct: 61 WGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 81.8 bits (193), Expect = 5e-14
Identities = 50/171 (29%), Positives = 90/171 (52%)
Frame = -3
Query: 648 KVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 469
++K+P+ + +++ + +KG G R F+ V + +K+ +K V
Sbjct: 9 EIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIV 67
Query: 468 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAP 289
T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVD 125
Query: 288 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 136
G V + D + I G + +AA I+++T +++ D R F DG+++
Sbjct: 126 GCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 64.5 bits (150), Expect = 7e-09
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR--QLKVEKW 499
M+ I NQ VKIPE+ + +V VK RG L+R+F H+ +++R++ R QL+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 498 FGSKKELAAVRTVCSHVENMIKGV 427
+ K LA T+ SHV+NMIK V
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 58.0 bits (134), Expect = 6e-07
Identities = 27/71 (38%), Positives = 44/71 (61%)
Frame = -3
Query: 456 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTV 277
+H+++ + GF Y+MR+VYA FP N + E ++IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 276 VNSPKQKDELI 244
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 56.0 bits (129), Expect = 3e-06
Identities = 33/138 (23%), Positives = 71/138 (51%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
MK+++ +KV+IPE +V + R++TV+G R R+ H + + V+ +++ ++
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMD-VHEGHVRL-RYGM 58
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 313
+++ VC +N I G G++Y +R + F +G T++ ++NFL
Sbjct: 59 AQQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFLDRSM 117
Query: 312 IRRVKMAPGVTVVNSPKQ 259
+ K A + ++P++
Sbjct: 118 LGDTKCAETLLRGSAPRK 135
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 54.0 bits (124), Expect = 1e-05
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-QLKVEKWFGSKK 484
VA VK+P + V + +L++VKGP+G L+ H +V++ +V +L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 483 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
A T + V NM++GV++GF+ K++ V + T++ + LG +
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQA----KGTVLNLA--LGFSHPVD 116
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
++ G+T +P Q D ++I G + V AA I+
Sbjct: 117 YELPNGIT-AETPSQTD-ILIRGIDKQLVGQVAAEIR 151
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 50.8 bits (116), Expect = 1e-04
Identities = 47/157 (29%), Positives = 76/157 (48%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
VA +KIP + V+V + +TVKG G L R H AV + + +L+ S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTD-AELQTICANDSPGS 62
Query: 480 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRV 301
A T + + NM++GV GFQ K+ V + EG ++ +G + +
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNI 116
Query: 300 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 190
+M G+T V +P Q E+I++G + VS AA I++
Sbjct: 117 EMPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 50.0 bits (114), Expect = 2e-04
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKK 484
V + ++IP +TV + + V VKGP+G L R F H ++I+ V L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 483 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
A T S + NM++GV+KGF+ + V + + GN ++ L Y
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYR---ASKSGNKLV-----LNVGYSHP 113
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
V++ P + + +++++G E V + AA I+
Sbjct: 114 VEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR 150
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 49.6 bits (113), Expect = 2e-04
Identities = 28/77 (36%), Positives = 47/77 (61%)
Frame = -3
Query: 645 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVR 466
+KIP+++ + VK LV V+G RG L ++ K ++++++ N + V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 465 TVCSHVENMIKGVTKGF 415
S + NM+KGVT+GF
Sbjct: 67 LYRSLIFNMVKGVTEGF 83
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 48.8 bits (111), Expect = 4e-04
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRQLKVEKWFGSKK 484
+ N V IP ++ V + ++ +KGP G L + + DI ++ N + V++ KK
Sbjct: 12 IGNIPVLIPNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKK 68
Query: 483 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
A + NMIKGV+ GF+ K+ + F N + N I+ + +G +
Sbjct: 69 NRALHGLYRMLIYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIM 125
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
+K+ +T+ + ++I++ + + AA I+
Sbjct: 126 IKLPQSITLEVKMDKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 48.4 bits (110), Expect = 5e-04
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRQLK----VEKWF 496
+A++ IP+ + + V + + +KG G L N ++L VD R N +K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 495 GSKKELAAVR-TVCSHVENMIKGVTKGFQYKM 403
+K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 48.4 bits (110), Expect = 5e-04
Identities = 30/89 (33%), Positives = 47/89 (52%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
V + V+IPE + + + + VTVKGP+G L R H + I + L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 480 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 394
A T S + NM+ GV+KGF+ + +
Sbjct: 62 RALHGTTRSLINNMVIGVSKGFEKSLEII 90
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 48.0 bits (109), Expect = 7e-04
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = -3
Query: 645 VKIPESLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAV 469
+ IP+ + V V +VTVKG +G L++ F + V+I V ++ V + K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIE-VRDGEVVVTRKGDDKEERAMH 66
Query: 468 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAP 289
T + + NM+KGVT+GF+ + V + +G + I N +G + ++ P
Sbjct: 67 GTTRAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEP 120
Query: 288 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 190
G+ ++ + + +I+ G E V AA I++
Sbjct: 121 GIEII--VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 47.6 bits (108), Expect = 0.001
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Frame = -3
Query: 606 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVRTVCSHVENMIKGV 427
+L+ + GPRG+L RNFKH ++DI++ Q ++ KE+ + + +++++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV----QKEI-------KEIKQIGLIKIEYQDVVQYS 101
Query: 426 TKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSP-KQKDE 250
+ FQ K A +I+N IR + GV + ++K+
Sbjct: 102 KQRFQVKSIAA-----------------QIKNM-----IRGI--TSGVVITRKEAEEKNV 137
Query: 249 LIIEGNSLEDVSSSAALIQQSTTVKNKDIR 160
LI+ N L +VS + ALI Q+ VKNKDIR
Sbjct: 138 LILSANDLNNVSLTCALIHQACAVKNKDIR 167
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 47.6 bits (108), Expect = 0.001
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRQLKVEKWF 496
+A + + +P+ +TV +K +V VKGP+G L + F ++ +++ V P + ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 495 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTII 343
+K T S + NM+ GVT+G++ ++ V + +GNT++
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTEGYKKELEIVGIGYR---AQLQGNTLV 111
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 45.2 bits (102), Expect = 0.005
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +1
Query: 118 NSRLLRYIETVQELSDILVLYCR*LLDQGS*TGYIF**VSFYDQFILLFR*IDNCHTRCH 297
N R I T+QE +DILV LL+ S F V+ +QFILL R + T
Sbjct: 22 NGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFMD 81
Query: 298 FYPPDVLFTKEVTDLNNCVSL--SGDTVDREMSVHCTHLVLESLGHTFDHVFDMR 456
F + FT+E+++ N +++ + V+ EM ++ +HLV + T D V + R
Sbjct: 82 FNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQVSNQR 136
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 44.4 bits (100), Expect = 0.009
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKK 484
V N+ +++P ++ V +K R ++V+GP+G L+ F H + + N ++ K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEI 60
Query: 483 ELAAVR-TVCSHVENMIKGVTKGFQYKMRAV 394
+ + T + + NM++GV+KGFQ ++ V
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSKGFQKTLKIV 91
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 43.2 bits (97), Expect = 0.020
Identities = 33/157 (21%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ + + +P + + + + + VKGP+G L R+ L + ++ N + L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 480 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
+ +C + V NM+ GV+KGF+ ++ V + +G+ + + N +G +
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLELVGVGYR---AAIQGSKL--VLN-VGYSHPVE 114
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
+ PG+ + + + + +++ G E V ++AA I+
Sbjct: 115 IPFPPGIQI--AVEGNNIIVVSGTDKELVGNTAARIR 149
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 42.7 bits (96), Expect = 0.026
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ + IP+ ++V + VTVKGP+G LKR V + V+ V K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVD--NTIVVAPTSEKRQ 60
Query: 480 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
+C + V NMI+GV+KG+ K+ V + +G T++ + Y
Sbjct: 61 SRERHGLCRTLVANMIEGVSKGYSKKLEIVGVG---SRAQVKGKTLV-----VSAGYSHP 112
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
V+M + + + + + G E V + AA I+
Sbjct: 113 VEMLAPEGITFAVENNTNVTVSGTDKELVGNEAAKIR 149
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 41.9 bits (94), Expect = 0.046
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Frame = -3
Query: 645 VKIPESLTVHVKSRLVTVKGPRGVLKRNFK---HLAVDIRMVNPRQLKVEKWFGSKKELA 475
+ IP +TV +K +VTVKGP+G L + ++A++ V + + E K++ A
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQYVNPAINVAIEDGHVTLTENEKEMIDNPKQKHA 68
Query: 474 AVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKM 295
S V NM+ GV++G++ ++ V + + +GN IIE+ LG + +++
Sbjct: 69 FHGLYRSLVHNMVVGVSEGYKKELELVGVGYR---ASNQGN-IIELA--LGYTHNIFIQL 122
Query: 294 APGVTV-VNSPKQKDELII 241
V V S + K+ LII
Sbjct: 123 PAEVKVETKSERNKNPLII 141
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 41.5 bits (93), Expect = 0.060
Identities = 27/86 (31%), Positives = 47/86 (54%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
V + + +P+ + +++K+ LV +KG GVL N L + I + N ++K + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPL-IAIEVEN-HEVKTIRANEEKHT 61
Query: 480 LAAVRTVCSHVENMIKGVTKGFQYKM 403
T S +ENMI GV+KGF+ ++
Sbjct: 62 KQLHGTTNSIIENMIIGVSKGFKKEL 87
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 41.5 bits (93), Expect = 0.060
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ N+ + +P + + +VTVKGP+G L R F ++IR V ++ + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 480 LAAVRTVCSHVENMIKGVTKGF--QYKMRAV 394
T + + NM+ GV++GF + +MR V
Sbjct: 62 KTIHGTTRALLNNMVVGVSEGFKKELEMRGV 92
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 41.1 bits (92), Expect = 0.080
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -3
Query: 672 MKQIVANQKVK-IPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWF 496
M+QI + + IP + + ++ + V G G L F H + ++ N + L V +
Sbjct: 1 MEQISGYKSIICIPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRY 59
Query: 495 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 394
+ A + T CS + +MI GVT+GF K++ +
Sbjct: 60 RNHVNRALLGTTCSLINSMIVGVTEGFVKKLQLI 93
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 40.7 bits (91), Expect = 0.11
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ + IP+ + V + VTVKGP+G LKR V + V+ + V +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVD-NSIVVAP-TSTKRS 60
Query: 480 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
+C + V NM+ GV++G+ K+ V + +G T++ + Y
Sbjct: 61 SRERHGLCRTLVANMVIGVSQGYSKKLEIVGVG---SRAQVKGKTLV-----VSAGYSHP 112
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
V++ P + + + + + G E V + AA I+
Sbjct: 113 VEVVPPEGITFTVENNTNVTVSGTDKELVGNEAAKIR 149
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 40.3 bits (90), Expect = 0.14
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRQLKVEKWFGSKK 484
V + IPE + V + V + GP+G L + FK ++A+ ++ +L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 483 ELAAVRTVCSHVENMIKGVTKGFQYKM 403
A T S + NMI GV +GF+ K+
Sbjct: 61 ARAMWGTARSIICNMITGVKEGFKLKL 87
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 39.9 bits (89), Expect = 0.18
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ + + +P+++T+ + + VTVKGP+G L R F ++ +V + V K +
Sbjct: 4 IGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRP 60
Query: 480 LAAVRTVC-SHVENMIKGVTKGFQYKM 403
+C + + NM++GV++GF K+
Sbjct: 61 AKERHGLCRTLLANMVEGVSQGFTKKL 87
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 39.9 bits (89), Expect = 0.18
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = -3
Query: 660 VANQKVKIPESLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRQLKVEKWFGS 490
+ + + PE++ V K VTV+GP+G L+ N H + + + R +K+++
Sbjct: 4 LVKKPIPYPENVKVSYDEKEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDR 62
Query: 489 KKELAAVRTVCSHVENMIKGVTKGF 415
A T+ + ++NMIKGVT+GF
Sbjct: 63 SFHKAIHGTMAALIKNMIKGVTEGF 87
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 39.5 bits (88), Expect = 0.24
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = -3
Query: 660 VANQKVKIPESLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRQLKVEKWFGS 490
+A + + PE++ V+ K + V+GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 489 KKELAAVRTVCSHVENMIKGVTKGF 415
A T+ + V+NMIKGVT+GF
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTEGF 87
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 38.7 bits (86), Expect = 0.43
Identities = 26/87 (29%), Positives = 43/87 (49%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
V + ++IP V + VKG G L R F V+I+ N Q+ VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHEN-NQISVERLNELKPT 61
Query: 480 LAAVRTVCSHVENMIKGVTKGFQYKMR 400
T + + NM+KGV++GF+ +++
Sbjct: 62 KQLHGTTNALIANMVKGVSEGFKKELK 88
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 38.7 bits (86), Expect = 0.43
Identities = 21/86 (24%), Positives = 45/86 (52%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ Q + +P ++T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 46 IGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRA 104
Query: 480 LAAVRTVCSHVENMIKGVTKGFQYKM 403
+ +NM+ GV+KGF+ K+
Sbjct: 105 NQMHGLFRTLTDNMVVGVSKGFEKKL 130
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.56
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ +K+P + V + VTVKGP+G L R+F+ ++ + V G+ K
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR---PEVTINREGDYLVVAPVGTDKA 60
Query: 480 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
+ + + ++NMI GV GF + V + +G+ ++ +
Sbjct: 61 TRSFFGLSRTLLDNMIVGVKDGFDKNLEIVGVGMRAD---KDGDKVV-----FKVGFSHS 112
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
V +AP + S ++ + G + EDV AA I+
Sbjct: 113 VTVAPPAGITLSVDGTTKVKVSGINKEDVGQMAAEIR 149
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 38.3 bits (85), Expect = 0.56
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ +++ + V VK ++ V GP+G L + I V + V++ SK+
Sbjct: 4 IGKMPIRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRA 61
Query: 480 LAAVRTVCSHVENMIKGVTKGFQYKM 403
A V NM++GVTKGF K+
Sbjct: 62 RAMHGLYRMLVSNMVEGVTKGFTRKL 87
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 37.9 bits (84), Expect = 0.74
Identities = 37/151 (24%), Positives = 69/151 (45%)
Frame = -3
Query: 645 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELAAVR 466
+++P+S+TV + +TVKGP+G L R F + N ++ + S+ + A
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYFDPKITFEQ--NDGEINFSR--SSESDKALHG 64
Query: 465 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKMAPG 286
T +++ +MI+GV G++ ++ + + +GN I L Y V +
Sbjct: 65 TERANLASMIEGVLNGYKKTLKLIGVGYR---AQAQGNKIT-----LNVGYSHPVVLTAP 116
Query: 285 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
V ++ +EG S +DV AA I+
Sbjct: 117 EGVSVKATSATDVEVEGVSKQDVGQFAAEIR 147
>UniRef50_UPI0000D573AC Cluster: PREDICTED: similar to CG14476-PB,
isoform B; n=2; Tribolium castaneum|Rep: PREDICTED:
similar to CG14476-PB, isoform B - Tribolium castaneum
Length = 950
Score = 37.5 bits (83), Expect = 0.98
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +2
Query: 413 WNPLVTPLIMFST*EHTVLTAASSFLEPNHFSTFNWRGLTMRMSTAKCLKFRFRTPRGPF 592
WN + P + ++ E T+ + F +H N GL MST + L R PF
Sbjct: 547 WNDMNEPSVFDNSIEKTLPGDSLHFGNVSHRDIHNIYGLLHTMSTHQGLLDRDNGTTRPF 606
Query: 593 TVTKRDFTWTVRLSGIFT 646
+T+ F T R SGI+T
Sbjct: 607 ILTRAHFAGTQRYSGIWT 624
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 37.5 bits (83), Expect = 0.98
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ + + IP +T ++ + + VKGP+G L R + + + +K ++
Sbjct: 4 IGKRPIPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQ 63
Query: 480 LAAV-RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRR 304
L + RT+ V NM+ GV+KGF+ ++ + +G +I L Y +
Sbjct: 64 LHGLSRTL---VANMVDGVSKGFEKRLEIQGVGYR---AQVQGKNLI-----LNVGYSKP 112
Query: 303 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 193
V+M P + + + +II G E V + AA I+
Sbjct: 113 VEMNPPQGITVAVENNTNVIISGIDKEVVGNIAAQIR 149
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 37.1 bits (82), Expect = 1.3
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ Q + +P +TV+ + + VKGP+G L + + + +R + QL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQ-DGDQLLVERPSDAQKH 61
Query: 480 LAAVRTVCSHVENMIKGVTKGF 415
A + V N +KGV+ G+
Sbjct: 62 RALHGLTRTLVANAVKGVSDGY 83
>UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Lactobacillus
johnsonii
Length = 176
Score = 36.7 bits (81), Expect = 1.7
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -3
Query: 645 VKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRQLKVEKWFGSKKELAAV 469
+++PE +TV +TVKGP+G L R F D R+ + ++ S+ + A
Sbjct: 9 IEVPEKVTVTKNGDDITVKGPKGELTRYF-----DPRITFEQKDGEIHFSRSSEADKALH 63
Query: 468 RTVCSHVENMIKGVTKGFQYKMRAV 394
T +++ +MI+GVT G+ K+ V
Sbjct: 64 GTERANLASMIEGVTDGYVKKLTLV 88
>UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 180
Score = 36.7 bits (81), Expect = 1.7
Identities = 25/83 (30%), Positives = 41/83 (49%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
V VKIPE + V V +V V+GP+G K +F + V+ ++KV + S
Sbjct: 4 VGKMPVKIPEKVKVSVDGNVVKVEGPKG--KMHFPTNPLVSVQVDKGEVKVARQDESHVA 61
Query: 480 LAAVRTVCSHVENMIKGVTKGFQ 412
+ V+N ++GV KG++
Sbjct: 62 KGLHGLTRTLVKNALEGVVKGYE 84
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 36.3 bits (80), Expect = 2.3
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKH-LAVDIRMVNPRQLKVEKWFGSKK 484
VA + IPE++ + + +V VKG +G L +++D V + + ++ +++
Sbjct: 4 VAKNPITIPENVDLSINENVVIVKGSKGELDFVLPDTISLD---VADKVITIKYDEENQQ 60
Query: 483 ELAAVRTVCSHVENMIKGVTKGFQYKMRAV 394
+A T S + NM+ GV++GF+ K+ +
Sbjct: 61 SVALAGTSRSLINNMVIGVSEGFEKKLELI 90
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 35.9 bits (79), Expect = 3.0
Identities = 29/141 (20%), Positives = 62/141 (43%)
Frame = -3
Query: 654 NQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKELA 475
++K++IP+++ + +K + ++GP G + N H N L +K+ +
Sbjct: 30 HEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRKKKS 89
Query: 474 AVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRVKM 295
+ S ++ IKG+ +GF K+ E N I++ LG + +++
Sbjct: 90 FLNLYKSLIKLKIKGILQGF--KLNLFLKGLGFKAFIEEKNLILK----LGYSHSITIEI 143
Query: 294 APGVTVVNSPKQKDELIIEGN 232
+ ++N Q ++LI N
Sbjct: 144 PENIKIIN---QTNKLIFSSN 161
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 35.5 bits (78), Expect = 4.0
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ + V IP + V + + VTVKGP+G L V+++ L + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 480 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRV 301
+ V NM+ GVT GF+ + V + +G T + ++ LG + V
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELVGVGYR---AAMKG-TALSLQ--LGFSHDVDV 115
Query: 300 KMAPGVTVVNSPKQKDELI--IEGNSLEDVSSSAALIQQSTTVKNKDIR 160
GVT PKQ + I I+ ++ ++++ I+ K K +R
Sbjct: 116 AAPAGVTFA-VPKQTEIKIAGIDKQAVGEIAAKIRRIRPPEPYKGKGVR 163
>UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;
n=1; Reclinomonas americana|Rep: Mitochondrial 60S
ribosomal protein L6 - Reclinomonas americana
Length = 185
Score = 34.7 bits (76), Expect = 6.9
Identities = 21/95 (22%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWF--GSK 487
+ ++++KIP+++++ + + V+G G L+ ++ + ++ + Q + G+K
Sbjct: 4 IGSKQIKIPKNVSIDLSMNKIYVRGDLGKLELPLNNINIHLKNIENDQFLILDPINTGTK 63
Query: 486 KELAAV----RTVCSHVENMIKGVTKGFQYKMRAV 394
K+ A T + +ENM+ GV+KG+ + V
Sbjct: 64 KQKTASYIMWGTYRTLIENMLIGVSKGYSKTIELV 98
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 34.7 bits (76), Expect = 6.9
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ + + +P +L+ + +TV GP+G L R +++ ++N K G K
Sbjct: 4 IGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILN--DTIAVKTSGQTKM 60
Query: 480 LAAVRTVC-SHVENMIKGVTKGFQYKMR 400
+ + + + + NMI+GV+ GF K++
Sbjct: 61 ASQLHGLSRTLISNMIEGVSNGFFKKLQ 88
>UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L6 - Lentisphaera araneosa HTCC2155
Length = 181
Score = 34.3 bits (75), Expect = 9.2
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Frame = -3
Query: 660 VANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFGSKKE 481
+ N+ + I + V + + V+VKGP+G LK + ++ V + S+
Sbjct: 4 IGNKAISITAGVEVKISGKEVSVKGPKGELKHTLTPRVEASVDADSNEVVVTRQDDSRFS 63
Query: 480 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKYIRRV 301
A S + NMI GV+ G++ ++ F +GN ++ LG +
Sbjct: 64 KAEHGLNRSLISNMIVGVSTGWKKELEIRGTGFR---GAVQGN---KLNLNLGYSHPINY 117
Query: 300 KMAPGVTVVNSPKQKDELIIEGNSLE---DVSSSAALIQQSTTVKNKDIR 160
++ G+ V + + ++I+EG+ + VS++ ++ K K +R
Sbjct: 118 EIPDGIKV--TMPEPTKIIVEGSDKQLVGQVSANIRFYRKPDAYKGKGVR 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,181,137,033
Number of Sequences: 1657284
Number of extensions: 20679086
Number of successful extensions: 40529
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 38912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40444
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 173813453725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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