Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_F01_e6_11.seq
         (1607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   4.8  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 234 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 139
           N+L    S+ AL+      K+  I++FL G+Y
Sbjct: 94  NTLNTCRSALALLLSPEVGKDHRIKRFLRGVY 125


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +1

Query: 55   LQXIRHEVQIPYLMVLYLICYNSRLLRYIETVQ-ELSDILVLYCR*LLDQ 201
            +Q +R ++   YL+  Y +  +  L+  IET + E+ D + ++   +L++
Sbjct: 1020 IQEVRAKIYFFYLVKFYKVSKSGELIHKIETNEHEIIDKIEMFSLQILNE 1069


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +1

Query: 55  LQXIRHEVQIPYLMVLYLICYNSRLLRYIETVQ-ELSDILVLYCR*LLDQ 201
           +Q +R ++   YL+  Y +  +  L+  IET + E+ D + ++   +L++
Sbjct: 301 IQEVRAKIYFFYLVKFYKVSKSGELIHKIETNEHEIIDKIEMFSLQILNE 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,533
Number of Sequences: 336
Number of extensions: 5398
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 48651875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)