Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_F01_e6_11.seq
(1607 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p pro... 308 2e-83
AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB... 308 2e-83
AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA... 308 2e-83
X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal prot... 307 3e-83
BT003787-1|AAO41470.1| 854|Drosophila melanogaster LD20919p pro... 30 7.8
AE014297-957|AAF54391.1| 854|Drosophila melanogaster CG8165-PA ... 30 7.8
>BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p
protein.
Length = 190
Score = 308 bits (755), Expect = 2e-83
Identities = 147/186 (79%), Positives = 165/186 (88%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 313
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 312 IRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVS 133
IRRV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVS
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 132 EKTTVV 115
EKTTVV
Sbjct: 181 EKTTVV 186
>AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB,
isoform B protein.
Length = 190
Score = 308 bits (755), Expect = 2e-83
Identities = 147/186 (79%), Positives = 165/186 (88%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 313
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 312 IRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVS 133
IRRV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVS
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 132 EKTTVV 115
EKTTVV
Sbjct: 181 EKTTVV 186
>AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA,
isoform A protein.
Length = 190
Score = 308 bits (755), Expect = 2e-83
Identities = 147/186 (79%), Positives = 165/186 (88%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 313
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 312 IRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVS 133
IRRV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVS
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 132 EKTTVV 115
EKTTVV
Sbjct: 181 EKTTVV 186
>X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal protein
L9 protein.
Length = 190
Score = 307 bits (754), Expect = 3e-83
Identities = 147/186 (79%), Positives = 164/186 (88%)
Frame = -3
Query: 672 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKVEKWFG 493
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRTFKHLALDMYMPDKRTLKVEKWFG 60
Query: 492 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNTIIEIRNFLGEKY 313
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E NT+IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 312 IRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVS 133
IRRV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVS
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 132 EKTTVV 115
EKTTVV
Sbjct: 181 EKTTVV 186
>BT003787-1|AAO41470.1| 854|Drosophila melanogaster LD20919p
protein.
Length = 854
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 328 EVTDLNNCVSLSGDTVDREMSVHCTHLVLE 417
+V +L+NC+ ++ D V E HC HL E
Sbjct: 775 QVQNLHNCIKVAEDFVSPENITHCYHLTHE 804
>AE014297-957|AAF54391.1| 854|Drosophila melanogaster CG8165-PA
protein.
Length = 854
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 328 EVTDLNNCVSLSGDTVDREMSVHCTHLVLE 417
+V +L+NC+ ++ D V E HC HL E
Sbjct: 775 QVQNLHNCIKVAEDFVSPENITHCYHLTHE 804
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,434,712
Number of Sequences: 53049
Number of extensions: 1017703
Number of successful extensions: 1650
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1645
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 9083065032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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