Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_E05_e37_09.seq
(1513 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13; Endopt... 170 7e-41
UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gamb... 145 3e-33
UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8... 136 2e-30
UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44; Coelom... 124 6e-27
UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella ve... 117 9e-25
UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 ... 107 8e-22
UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3; Ixodoid... 97 1e-18
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 87 9e-16
UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma... 87 9e-16
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 87 9e-16
UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1; ... 87 1e-15
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 86 2e-15
UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=1... 86 2e-15
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 85 6e-15
UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17; Magn... 83 2e-14
UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7; Pezizomy... 82 4e-14
UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=... 81 7e-14
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 80 1e-13
UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8; Pezizom... 80 1e-13
UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthor... 67 1e-09
UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1; F... 62 4e-08
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 61 6e-08
UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2; Caenorh... 60 1e-07
UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1; ... 38 5e-06
UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 54 1e-05
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 48 9e-04
UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2; Cryptos... 47 0.001
UniRef50_A0C5U4 Cluster: Chromosome undetermined scaffold_150, w... 47 0.001
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 45 0.005
UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2; Dictyos... 45 0.006
UniRef50_O00822 Cluster: 60S ribosomal protein L28; n=9; Trypano... 42 0.056
UniRef50_A4S554 Cluster: Ribosomal protein L28, component of cyt... 40 0.23
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 39 0.39
UniRef50_Q5QQM4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.52
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 38 0.91
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 37 1.6
UniRef50_UPI00006CFBC8 Cluster: hypothetical protein TTHERM_0048... 36 3.7
UniRef50_Q245G5 Cluster: Cyclin, N-terminal domain containing pr... 35 6.4
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 34 8.5
UniRef50_Q8IM40 Cluster: Putative uncharacterized protein; n=4; ... 34 8.5
>UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13;
Endopterygota|Rep: 60S ribosomal protein L28 -
Drosophila melanogaster (Fruit fly)
Length = 144
Score = 170 bits (414), Expect = 7e-41
Identities = 78/124 (62%), Positives = 97/124 (78%)
Frame = +2
Query: 50 SSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKG 229
SSHLNW+IIRNNNAFL+KK ++KKPFS EPNN+ +++SYRY+G++HKK +GVV D+KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 230 FTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAILR 409
FT V KK K +P KN +R FKAG RR L K K LL + YR DLT+A LRRASA+LR
Sbjct: 64 FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123
Query: 410 SQRP 421
SQ+P
Sbjct: 124 SQKP 127
>UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000014265 - Anopheles gambiae
str. PEST
Length = 158
Score = 145 bits (351), Expect = 3e-33
Identities = 67/124 (54%), Positives = 89/124 (71%)
Frame = +2
Query: 50 SSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKG 229
SSHLNW+I+R++NAFL+K+ +I+KPFS EP N+TNL+S+RY+GL+H K + + ++KG
Sbjct: 4 SSHLNWLIVRDHNAFLLKRRDIRKPFSTEPGNLTNLSSFRYSGLVHHKTI-TITPAEKKG 62
Query: 230 FTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAILR 409
VY + K NKP K ++ K G RR L K ++KAN YR DL A LRRASAILR
Sbjct: 63 VNFVYNRKKVLNKPAKAPVKVTLKEGPRRTLKKIANMMKANRYRADLRGAALRRASAILR 122
Query: 410 SQRP 421
SQRP
Sbjct: 123 SQRP 126
>UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8;
Neoptera|Rep: Ribosomal protein L28-like protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 139
Score = 136 bits (328), Expect = 2e-30
Identities = 67/124 (54%), Positives = 83/124 (66%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 226
MS+ L WMI RNNNA+L+KK +IKKPFS EP N+ N+ S+RYNGL+ K V V D K
Sbjct: 1 MSADLYWMITRNNNAYLLKKRDIKKPFSTEPGNLKNVASFRYNGLVQPKTVDVRAAKDGK 60
Query: 227 GFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAIL 406
GF + K+AK NKP K+ I AG RR L+K +R L YR DLT+ LR+ASAIL
Sbjct: 61 GFVVTTKRAKQQNKPGKSNISVTMSAGPRRSLYKLRRYLDGGKYRKDLTQVALRKASAIL 120
Query: 407 RSQR 418
SQ+
Sbjct: 121 ESQK 124
>UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44;
Coelomata|Rep: 60S ribosomal protein L28 - Homo sapiens
(Human)
Length = 137
Score = 124 bits (299), Expect = 6e-27
Identities = 58/126 (46%), Positives = 81/126 (64%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 226
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 227 GFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAIL 406
G +V K+ KP + +R AR L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 407 RSQRPI 424
RSQ+P+
Sbjct: 119 RSQKPV 124
>UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 137
Score = 117 bits (281), Expect = 9e-25
Identities = 61/125 (48%), Positives = 78/125 (62%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 226
MSS L W IIRNN+ FLV+ K +KEPNNVT LN+++YNGL++KK VGV P K
Sbjct: 1 MSSDLQWSIIRNNSCFLVRSQG--KTLTKEPNNVTGLNAFKYNGLVNKKVVGVDAAPSGK 58
Query: 227 GFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAIL 406
G I +K KA NKP K + + +RR L + + N+YR DL +RRA AIL
Sbjct: 59 GVVITTRKNKAANKPGKIMNKITISRDSRRTLKTIEGVCDKNYYRMDLKDPAMRRACAIL 118
Query: 407 RSQRP 421
RSQ+P
Sbjct: 119 RSQKP 123
>UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 -
Suberites domuncula (Sponge)
Length = 136
Score = 107 bits (257), Expect = 8e-22
Identities = 53/128 (41%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKP---FSKEPNNVTNLNSYRYNGLIHKKAVGVVENP 217
MS+ L W +I+N+++FL+++ + F+ EPNNV N NS+++NGL++KK VGV
Sbjct: 1 MSAELQWELIKNSSSFLLRRKGPRGSGVTFTTEPNNVMNKNSFKFNGLVNKKVVGVSSAA 60
Query: 218 DRKGFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRAS 397
D KG K++K +KP K +R RR K+ L+ YR DL + +RRAS
Sbjct: 61 DNKGVLFKTKRSKVVSKPAKMFVRATLSKDRRRAFKSIKKNLECTEYRPDLAELAVRRAS 120
Query: 398 AILRSQRP 421
AIL SQRP
Sbjct: 121 AILSSQRP 128
>UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3;
Ixodoidea|Rep: 60S ribosomal protein L28 - Argas
monolakensis
Length = 142
Score = 96.7 bits (230), Expect = 1e-18
Identities = 53/127 (41%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 226
+S WM++RN ++FLVKK NIKK FS +P N + + R+ G I K+A+ V + K
Sbjct: 2 VSRTYRWMVVRNCSSFLVKKRNIKKWFSTDPLNPKGVYANRFAGTIKKRALTVEPHSSGK 61
Query: 227 GFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKA-NHYRTDLTKATLRRASAI 403
G T VY K KP K + R G RR + + +K +YR DL + RRASAI
Sbjct: 62 GVTFVYLAHKGATKPAKRLKRVQLVKGPRRTMVSIRNWIKGMGYYRRDLRRVCQRRASAI 121
Query: 404 LRSQRPI 424
L+SQR I
Sbjct: 122 LKSQRAI 128
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 87.4 bits (207), Expect = 9e-16
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +1
Query: 535 YPIRPIVSRITISLAVVLQRRDWENPGVXXLXRLAAHPPFASWRNSEEARTDSP 696
YP+ +S LAVVLQRRDWENPGV L RLAAHPPFASWRNSEEARTD P
Sbjct: 55 YPLVKALSESYYGLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP 108
>UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma
japonicum|Rep: Ribosomal protein L28 - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 87.4 bits (207), Expect = 9e-16
Identities = 45/113 (39%), Positives = 63/113 (55%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 226
MSSHL W +I+NN+ FL+K+ + FS++P N+ N N +RY G +HKKA+G+ E K
Sbjct: 1 MSSHLIWDLIKNNHCFLMKRG--PECFSRDPLNLKNKNCFRYCGPVHKKAIGIKEERYGK 58
Query: 227 GFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATL 385
G + K +KP K + R F G RR L K + L YR +L L
Sbjct: 59 GVVVTTKNVAKDHKPAKAVTRTKFVRGRRRTLQKIRNLTCKQKYRRELKMLAL 111
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 87.4 bits (207), Expect = 9e-16
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +1
Query: 553 VSRITISLAVVLQRRDWENPGVXXLXRLAAHPPFASWRNSEEARTDSP 696
++ IT SLAVVLQRRDWENPGV L RLAAHPPFASWRNSEEARTD P
Sbjct: 1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP 48
>UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 221
Score = 87.0 bits (206), Expect = 1e-15
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Frame = +2
Query: 50 SSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKG 229
S L W+++RNN++F+VK+ I + FS+EP N+ L+SY+Y+GL++ KAVG+ KG
Sbjct: 3 SQDLQWLLVRNNSSFIVKQKGIGRIFSREPRNLVQLHSYKYSGLVNAKAVGIEAAKSGKG 62
Query: 230 FTIVYKKAKATNKPVKNIIRRPF--KAGARRFLFKAKRLLKANHYRTDLTKATLR 388
I K AK ++ +K + K G RR ++ YR DLT+ R
Sbjct: 63 VVITTKNAKQSSSAIKKTVNVATLKKGGGRRTAGAVSNVVAKKGYRADLTREPTR 117
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 86.2 bits (204), Expect = 2e-15
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1
Query: 538 PIRPIVSRITISLAVVLQRRDWENPGVXXLXRLAAHPPFASWRNSEEARTDSP 696
P+ +++LAVVLQRRDWENPGV L RLAAHPPFASWRNSEEARTD P
Sbjct: 14 PLESTCRHASLALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP 66
>UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=19;
Neodiplogasteridae|Rep: Large subunit ribosomal protein
28 - Pristionchus sp. 11 RS5228
Length = 127
Score = 86.2 bits (204), Expect = 2e-15
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +2
Query: 71 IIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKGFTIVYKK 250
+IRNN+AFL ++ I+K FS+EP N+ +NS YNGL + KAVGV D K + KK
Sbjct: 2 VIRNNSAFLRRQRGIQKAFSREPLNLKGINSPNYNGLTNNKAVGVTLAEDNKSVVVSVKK 61
Query: 251 AKATNKPVKNIIRRPFKAGARRFLFKA-KRLLKANHYRTDLTKATLRRASAILRSQR 418
N P +++I+ K G R + K+ + L+K + R K RRAS +LRS R
Sbjct: 62 TGKKNLPAQSVIKTTIKRGGARGIVKSVQGLVKGRNAR--FAKLAARRASQLLRSVR 116
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 84.6 bits (200), Expect = 6e-15
Identities = 38/42 (90%), Positives = 38/42 (90%)
Frame = +1
Query: 571 SLAVVLQRRDWENPGVXXLXRLAAHPPFASWRNSEEARTDSP 696
SLAVVLQRRDWENPGV L RLAAHPPFASWRNSEEARTD P
Sbjct: 21 SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP 62
>UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17;
Magnoliophyta|Rep: 60S ribosomal protein L28-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 83.0 bits (196), Expect = 2e-14
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Frame = +2
Query: 59 LNWMIIRNNNAFLVK---KANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKG 229
L W I++NNN FLVK + N K FSKE NN+TN++SY+++GL +KK V + +
Sbjct: 8 LIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQA 67
Query: 230 FTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAILR 409
+ K K NKP ++ + K R + N+YR DL KA L R SAI +
Sbjct: 68 VVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISK 127
Query: 410 SQR 418
R
Sbjct: 128 GLR 130
>UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7;
Pezizomycotina|Rep: RIB40 genomic DNA, SC111 -
Aspergillus oryzae
Length = 157
Score = 81.8 bits (193), Expect = 4e-14
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKK-ANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDR 223
+SS L W + RN NAFLVK+ + FS++P N+ N +S++Y G + KA+G V+ +
Sbjct: 8 VSSDLVWQLTRNQNAFLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAIG-VQPTEN 66
Query: 224 KGFTIVYKKAKATNKPVKNIIRRPF--KAGARRFLFKAKRLLKANHYRTDLTKATLRRAS 397
G ++ KK+ +P KN +R F KA R+ N YR DL + + R S
Sbjct: 67 GGVVVLTKKSGNAQQPGKNAVRVTFGPKASTRKIYKGVADKTAKNGYRADLREDAVARVS 126
Query: 398 AILRSQRP 421
AI RSQ+P
Sbjct: 127 AIRRSQKP 134
>UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=1;
Schizosaccharomyces pombe|Rep: Probable 60S ribosomal
protein L28e - Schizosaccharomyces pombe (Fission yeast)
Length = 134
Score = 81.0 bits (191), Expect = 7e-14
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKK-PFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDR 223
+S+ L W +IR+NN FLVK+ F++EP NV+ N+ R++GL + KAVGV N R
Sbjct: 3 VSNDLIWQVIRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANSPR 62
Query: 224 KGFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFK--AKRLLKANHYRTDLTKATLRRAS 397
I K KP K + + R +K A R+ + YR DL K ++ RAS
Sbjct: 63 GVVLITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTG-YRDDLVKVSVARAS 121
Query: 398 AILRSQRP 421
AIL SQRP
Sbjct: 122 AILSSQRP 129
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 80.2 bits (189), Expect = 1e-13
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +2
Query: 569 FHWPSFYNVVTGKTLAXPXLXALQHIPLSPAGVIAKRPAPIRPSXQLRXLNGEWQI 736
+HWPSFYNVVTGKTLA P L ALQHIPLSPAGVI++ RPS QLR L +W++
Sbjct: 4 WHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSL--KWRM 57
>UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8;
Pezizomycotina|Rep: 60S ribosomal protein L28 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 157
Score = 80.2 bits (189), Expect = 1e-13
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKK-ANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDR 223
+SS L W I RN NAFLVK+ FS++P N+ N S++Y G + KAVG V+ +
Sbjct: 8 VSSDLVWQITRNQNAFLVKRRTGGGSQFSRDPLNLQNKQSFKYAGYANTKAVG-VQATEN 66
Query: 224 KGFTIVYKKAKATNKPVKNIIRRPF-KAGARRFLFKAKRLLKA-NHYRTDLTKATLRRAS 397
G ++ KK +P KN++ + A R ++KA A N YR DL + + R S
Sbjct: 67 GGVVVITKKPGNPQQPAKNLVSVSWGPNAATRKIYKAVASKTAKNGYRADLREDAVARVS 126
Query: 398 AILRSQRP 421
AI RSQ+P
Sbjct: 127 AIRRSQKP 134
>UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthora
infestans|Rep: Ribosomal protein L28 - Phytophthora
infestans (Potato late blight fungus)
Length = 139
Score = 66.9 bits (156), Expect = 1e-09
Identities = 42/118 (35%), Positives = 63/118 (53%)
Frame = +2
Query: 50 SSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKG 229
S L W++ +N ++FLVK+ F++E N+ N N +Y+GL KAV + + D+K
Sbjct: 3 SDTLTWLLTKNTSSFLVKRNG--NEFAREKFNLLNRNCRKYSGLASTKAVDISIS-DKK- 58
Query: 230 FTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAI 403
T+ K KAT KP K P + GAR + + N+YR DL KA L + S +
Sbjct: 59 VTLTTKIEKATKKPAKAQNAVPLRKGARGGANTIRANISRNYYRRDLKKAALAKWSRL 116
>UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: 60s ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 156
Score = 62.1 bits (144), Expect = 4e-08
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 226
MSS L W+++RN N+F VK + FS+E N+ N ++++Y+GL + K V + +P
Sbjct: 1 MSSDLTWLLVRNWNSFQVKGGH-GPVFSREKGNLLNKSAHKYSGLANSKVVSI--HPSAA 57
Query: 227 GFTIVYKKAKATNKP-----VKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRR 391
G I K KA KP ++ + G RR A YR DL + R
Sbjct: 58 G-GITITKIKADAKPNQVASARSHVTLKRSTGPRRANKIAAAETAGKGYRADLRAVAVAR 116
Query: 392 ASAILRSQR 418
SA+LR++R
Sbjct: 117 TSALLRAER 125
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 61.3 bits (142), Expect = 6e-08
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = +1
Query: 559 RITISLAVVLQRRDWENPGVXXLXRLAAHPPFASWRNSEEARTDSPFP 702
++ +SL +L RRDWENP + RL AHPPF SWR+ E A+ D P P
Sbjct: 10 QVQLSLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSP 57
>UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L28 -
Caenorhabditis elegans
Length = 126
Score = 60.5 bits (140), Expect = 1e-07
Identities = 44/123 (35%), Positives = 63/123 (51%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 226
MS L W +IRNN+AFL + I K FS E N+ +NS +Y+GL +K A+ V + K
Sbjct: 1 MSDALVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV--SAAAK 58
Query: 227 GFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAIL 406
G + K K +P K + ++ + +RL K N K RRA+AI+
Sbjct: 59 GVVVSTKNEK--GRPAKAVTTSTL---SKTPVASVRRLAK-NAGFNKFNKLAQRRAAAIV 112
Query: 407 RSQ 415
RSQ
Sbjct: 113 RSQ 115
>UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 192
Score = 37.5 bits (83), Expect(2) = 5e-06
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 179 LIHKKAVGVVENPDRKGFTIVYKKAKATNKPVKNIIRRPFKAGA-RRFLFK--AKRLLKA 349
L +A+GV + + G + KK + +P K++ + GA R ++K A R K
Sbjct: 88 LTSNQAIGV-QATENGGVVTITKKPGTSQQPAKSLAVVTYGPGASNRKIYKGVADRTAK- 145
Query: 350 NHYRTDLTKATLRRASAILRSQR 418
N YR DL + + R SAI RSQ+
Sbjct: 146 NGYRADLRQEAVSRVSAIRRSQK 168
Score = 37.1 bits (82), Expect(2) = 5e-06
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKK-ANIKKPFSKEPNNVTNLNSYR 169
+SS L W + RN NA+LVK+ + FS++P NV N +S++
Sbjct: 8 VSSDLVWQLTRNQNAYLVKRNTHGGVQFSRDPLNVLNKHSFK 49
>UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 183
Score = 54.0 bits (124), Expect = 1e-05
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 226
+S+ W ++ NA+LVK+ I S++P + NL+++ +GL H KAVGV
Sbjct: 48 VSNDFIWECTKSTNAYLVKRKGIDTTLSRDPYALNNLSTHYESGLSHDKAVGVHYCKPSG 107
Query: 227 GFTIVYKKAKATNKPVKNIIRRPFK-AGARRFLFKAKRLLKANHYRTDLTKATLRRASAI 403
++ K K NKP K+ FK + R + KA Y+ + + RASAI
Sbjct: 108 KICVITKVVKNANKPAKSRHIVEFKPTKSSRAIAKAVS-KTVQGYKDEQIYDAIVRASAI 166
Query: 404 LRS 412
R+
Sbjct: 167 KRA 169
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 47.6 bits (108), Expect = 9e-04
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 565 TISLAVVLQRRDWENPGVXXLXRLAAHPPFASWRNSEEARTDSP 696
T LA +L R DW+NP + + RL +H P WR+++ AR P
Sbjct: 15 TRPLATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEP 58
>UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L28 -
Cryptosporidium parvum Iowa II
Length = 127
Score = 46.8 bits (106), Expect = 0.001
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Frame = +2
Query: 50 SSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKG 229
S+ L W ++ N +F+ K N F+ EP N+ NLN+ +Y+GL ++++ + P+ G
Sbjct: 3 STELLWQCVKKNTSFI--KKNNGFTFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSNG 60
Query: 230 FTIVYKKAKATNKPV-KNIIRRPFKAGARRFL---FK-AKRLLKAN-HYRTDLTKATLRR 391
+ K AK T K + IR P K ++ L FK AK+ +K R DL + R
Sbjct: 61 KLV--KNAKITKKNTGSSTIRCPKKLISKVNLSNNFKQAKKTIKNQISSRPDLKNVAIIR 118
Query: 392 ASAILRSQ 415
I +++
Sbjct: 119 YRKIQKAK 126
>UniRef50_A0C5U4 Cluster: Chromosome undetermined scaffold_150,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_150,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 46.8 bits (106), Expect = 0.001
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVV 208
MS + W +++ NNAFLVK+ + S +P N T + +Y G I K AVGVV
Sbjct: 1 MSQQVLWEVVKGNNAFLVKRNGL--TLSTDPFNNTGVQTYSSTGFISKNAVGVV 52
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 45.2 bits (102), Expect = 0.005
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +1
Query: 583 VLQRRDWENPGVXXLXRLAAHPPFASWRNSEEARTDSP 696
VL R DW N + L RL AHP FASWR+ AR + P
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLP 54
>UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L28
- Dictyostelium discoideum (Slime mold)
Length = 132
Score = 44.8 bits (101), Expect = 0.006
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +2
Query: 47 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGV 205
MS L W II+ NNAFL K++ S EP N+ N NS +Y+GL + + V
Sbjct: 1 MSQDLVWSIIKKNNAFL--KSSHGLTLSAEPGNLRNKNSLKYSGLARRTTIDV 51
>UniRef50_O00822 Cluster: 60S ribosomal protein L28; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein L28 -
Trypanosoma cruzi
Length = 146
Score = 41.5 bits (93), Expect = 0.056
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 50 SSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLN-SYRYNGLIHKKAVGVVENPDRK 226
S+ L W+++R N+ FL K+ I+ S +P N N N + R+ G ++ KA V DR
Sbjct: 4 STDLQWLLVRQNSKFLQKRNGIR--LSSDPFN-NNANWTKRHAGFLNTKAAVVKTKGDR- 59
Query: 227 GFTIVYKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRA 394
+ K KA NKP + AG + + + A R DL RRA
Sbjct: 60 -ILVTTKDGKAGNKPKSMYKKAVMDAGVEASV--VSKAVAA--VRPDLASIASRRA 110
>UniRef50_A4S554 Cluster: Ribosomal protein L28, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L28, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 121
Score = 39.5 bits (88), Expect = 0.23
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +2
Query: 65 WMIIRNNNAFL-VKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKGFTIV 241
W + + +NAF + FS EP NVT S+R +GL + K + + E+ KG
Sbjct: 13 WQVTKKHNAFTRASTSGHGARFSAEPGNVTAEVSFRASGLANAKTIDIREHDGGKG---- 68
Query: 242 YKKAKATNKPVKNIIRRPFKAGARRFLFKAKRLLKANHYRTDLTKATLRRASAILRSQR 418
K AT K + FK+ A AK R DL KA L R SAI ++ R
Sbjct: 69 --KPAATCDGKK--LCGSFKSQAGEVKIAAKA-------RPDLEKAALARISAINKAGR 116
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 38.7 bits (86), Expect = 0.39
Identities = 26/52 (50%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 415 EAYQGEES*SCNS*DGITCKL-VRINFXXXXXXXXTRGGARYPIRPIVSRIT 567
E QG + + N I KL VR F RGGARYPIRPIVSRIT
Sbjct: 224 EETQGLNNKTRNREINILDKLYVRNEFNQAYRYRRPRGGARYPIRPIVSRIT 275
>UniRef50_Q5QQM4 Cluster: Putative uncharacterized protein; n=1;
Orpinomyces sp. OUS1|Rep: Putative uncharacterized
protein - Orpinomyces sp. OUS1
Length = 259
Score = 38.3 bits (85), Expect = 0.52
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = +3
Query: 951 PXGXPXXSFLGPGAXXLXGPXGSPXXXXXGXPGMXXXGG*XXXRPXGLXXTXPXRTPPPA 1130
P G P S +GP GP G+P G P M G P G P R PPP
Sbjct: 27 PMGPPGASPMGPPGASPMGPPGAPPMGPPGAPPMGPPGA--PMGPPGTPMGGPARPPPPQ 84
Query: 1131 L 1133
L
Sbjct: 85 L 85
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 37.5 bits (83), Expect = 0.91
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 571 SLAVVLQRRDWENPGVXXLXRLAAHPPFASWRNSEEARTDS 693
SL ++ RRDWENP + ++ AH P ++ E+AR ++
Sbjct: 3 SLQHIINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENT 43
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 36.7 bits (81), Expect = 1.6
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 523 GGARYPIRPIVSRITISLAVVLQRRDWENPGVXXLXRLAAHPPFASWRNSEEA 681
GGAR PI P IS A L+RR+ +NPG L L A P F +++A
Sbjct: 39 GGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKA 91
>UniRef50_UPI00006CFBC8 Cluster: hypothetical protein
TTHERM_00487140; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00487140 - Tetrahymena
thermophila SB210
Length = 294
Score = 35.5 bits (78), Expect = 3.7
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 53 SHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNS 163
S L W I++NNNAFLVK + F+ +P +VT N+
Sbjct: 2 SQLVWEIVKNNNAFLVKNNGV--AFTTDPFSVTGRNT 36
>UniRef50_Q245G5 Cluster: Cyclin, N-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclin,
N-terminal domain containing protein - Tetrahymena
thermophila SB210
Length = 353
Score = 34.7 bits (76), Expect = 6.4
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 41 YKMSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNN-VTN-LNSYRYNGLIHKKAVGVVEN 214
+K S+LNW + N + K NIK K+ NN +TN L + +N I+K+ + ++E
Sbjct: 35 WKKKSYLNWQGCKKINNKQINKQNIKATQIKKKNNQLTNSLLGFSFNQSINKQIIQLLEI 94
Query: 215 PDRKGFTIVYKKAKATNKPVK 277
I KK + NK +K
Sbjct: 95 N-----KIKEKKKETKNKQIK 110
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 34.3 bits (75), Expect = 8.5
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 538 PIRPIVSRITISLAVVLQRRDWENP 612
P+ + I SLAVVLQRRDWENP
Sbjct: 167 PLLEKMLMILESLAVVLQRRDWENP 191
>UniRef50_Q8IM40 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1515
Score = 34.3 bits (75), Expect = 8.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 71 IIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVEN 214
+I+N N F +K A+ KK K +N+++ +Y N I + + V N
Sbjct: 480 LIKNKNVFKIKSADCKKEEKKIDSNISDYMNYEENNKISNRHINNVNN 527
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,013,298,322
Number of Sequences: 1657284
Number of extensions: 17353970
Number of successful extensions: 33509
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 31994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33416
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 160908510525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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