Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_E04_e29_10.seq
(1529 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 34 0.060
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 33 0.14
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 32 0.18
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 28 3.0
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 28 3.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 3.9
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 28 3.9
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 27 5.2
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 27 5.2
SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC su... 27 6.9
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 27 6.9
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 6.9
SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 9.1
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 27 9.1
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 9.1
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 9.1
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 33.9 bits (74), Expect = 0.060
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 204 AFQTELRDWTKSKHNEEAVTPNNNTNTLKENADCND-LSLIPKNRNNLLRQLSKALNSLK 380
A +L D T S ++E V N+ + ++EN + L ++ + ++L +QL A S K
Sbjct: 652 AKHNKLSDGTFSTPDKENVQSTNDAHIMQENFSLHKALEVMRETSSDLDKQLKDATASQK 711
Query: 381 EDIGDPKAMYKELTFFQNRHKQL 449
E I + KEL + RH +
Sbjct: 712 ELIVQTSSFQKELVEERERHNAI 734
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 32.7 bits (71), Expect = 0.14
Identities = 36/139 (25%), Positives = 65/139 (46%)
Frame = +3
Query: 336 NNLLRQLSKALNSLKEDIGDPKAMYKELTFFQNRHKQLLNQKTISPKQVSNNRKTINDMF 515
++L L K L+S+K+D + YKEL + + ++ S + +SN K IN+
Sbjct: 943 SDLSSTLEKKLSSIKKDEQTISSKYKEL---EKDYLNIMADYQHSSQHLSNLEKAINE-- 997
Query: 516 KKLNMVLLGQAGLADGSQHLNELYSFQEKLMNSRQKNIPPEQRKEIGQHYYSIFAAIPRD 695
K LN+ L + + + L + S+ K+ R++N K+ + Y S A+
Sbjct: 998 KNLNIRELNEKLMRLDDELLLKQRSYDTKVQELREEN---ASLKDQCRTYESQLAS---- 1050
Query: 696 DYLELLKKFYQTSTSLKKK 752
L+ K+ +T + L KK
Sbjct: 1051 ----LVSKYSETESELNKK 1065
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.3 bits (70), Expect = 0.18
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 465 ISPKQVSNNRKTINDMFKKLNMVLLGQAGLADGSQHLNELYSFQEKLMNSRQKNIPPEQR 644
+ PKQ S+N +I+ +++ Q +D +NE YSF + NS KN+
Sbjct: 514 LQPKQPSSNTDSIDQSSYNMSLAASKQFLTSDTQPDVNENYSF---ISNSIPKNLSTSWN 570
Query: 645 KEIGQH 662
+ +G H
Sbjct: 571 QNMGYH 576
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 644 KGDRTALLQHIRCYPEG*LFRT-SKEILSDLYIIKEENKKWPPLT---FNAKMSWSKKGK 811
+G+RT LL H+ +T S+E + L +I+E+++ W P T FN + W+ + K
Sbjct: 496 EGNRTILL-HLADQMNACSLQTKSRESIKTLKLIEEKDEYWEPETAGYFNTIVGWADQRK 554
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 186 KIADQEAFQTELRDWTKSKHNEEAVTPNNNTNTLKENADC--NDLSLIPKNRNNLLRQLS 359
++A A E+ DW + NE+A N T KE+ D ++ L+ + N+ ++ +
Sbjct: 98 RVASSSAADNEIVDWKANNSNEKA---QNKIATNKESTDILPEEVQLVLNDLNDDVKSAN 154
Query: 360 KA-LNSLKEDIGDPKAMYKE 416
A L + ++ + K Y++
Sbjct: 155 SANLQPITTNVVNEKDAYRK 174
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.9 bits (59), Expect = 3.9
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 4/195 (2%)
Frame = +3
Query: 189 IADQEAFQTELRDWTKSKHNEEAVTPNNNTNTLKENADCNDLSLIPKNRNNLLRQLSKAL 368
+AD E Q E DW + + E ++ N L++ A+ + + L +
Sbjct: 1322 VADLEKLQHEHDDWLIQRGDLEKALKDSEKNFLRKEAEMTE----------NIHSLEEGK 1371
Query: 369 NSLKEDIGDPKAMYKELTFFQNRHK-QL--LNQKTISPKQVSNNRKT-INDMFKKLNMVL 536
K++I + + ++ N+ K QL LNQ+ + V +++ I + + L+
Sbjct: 1372 EETKKEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKEDVLKEKESLIISLEESLSNQR 1431
Query: 537 LGQAGLADGSQHLNELYSFQEKLMNSRQKNIPPEQRKEIGQHYYSIFAAIPRDDYLELLK 716
++ L D L + + +S + I + + + +A+ + L L+
Sbjct: 1432 QKESSLLDAKNELEHMLDDTSRKNSSLMEKI-ESINSSLDDKSFELASAVEK---LGALQ 1487
Query: 717 KFYQTSTSLKKKIKS 761
K + S SL + IKS
Sbjct: 1488 KLHSESLSLMENIKS 1502
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 327 KNRNNLLRQLSKALNSLKEDIGDPKAMYKELTF 425
KN+ L +Q S +S+ E + DP+ +Y E F
Sbjct: 78 KNKKRLEKQSSAIADSIGESLDDPQTVYDEHLF 110
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 382 SFKEFKALLNWRSRLFLFLGIRLKSLQSAFSFKVFVLLFGVTASSLCLLFV 230
+F + WR F +RL S F +FV + G+ + + CL FV
Sbjct: 126 AFTSLMVKMYWRFSSVHFQTLRLASAIQLKKF-IFVKILGIVSKTYCLAFV 175
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 330 NRNNLLRQLSKALNSLKEDIGDPKAMYKELTFFQNRHKQLLNQ 458
N NLL+ LSK+ S+ D D ++K L FQN L+++
Sbjct: 90 NFRNLLKSLSKSNVSVLPDDSDATHLHKWLLKFQNMLTLLMSR 132
>SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC
subunit Psc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.1 bits (57), Expect = 6.9
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +3
Query: 417 LTFFQNRHKQLLNQKTISPKQVSN-------NRKTINDMFKKLNMVLLGQAGLADGSQHL 575
+TF + K+LLN+ I+ KQ+ NR IN++ L ++ Q L + +L
Sbjct: 233 MTFLCEKSKELLNEHAIATKQLEKEEKRSRVNRNRINELNNSLGEIVKQQDTL---TTYL 289
Query: 576 NELYSFQEKLMNSRQKNIPPEQR 644
N+ + + + R +++ P+ R
Sbjct: 290 NDYF---DSVFVHRYRDVEPKIR 309
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -1
Query: 560 ICKTCLTEEYHIQFFKHVIYCLSVVRHLFR 471
+CK + EYH+ F+ ++ C + L R
Sbjct: 441 VCKADIEREYHVYLFEKILLCCKEMSTLKR 470
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 299 SVFFQSVCIIIWSNSFFIMFALCPISEFS-LKSLLISNFSFN 177
+V + C +I S+ F LC I +FS + L + N++FN
Sbjct: 878 NVLLEGRCSLILSHRCFQYMVLCAIVQFSGVFFLYLKNYNFN 919
>SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 206
Score = 26.6 bits (56), Expect = 9.1
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 63 LQXIRHEGTGXKGRXWLKGIMSKLNIS-VECT-DINSFLSIKGKIADQEAFQTELRDWTK 236
L+ + HE + + R K+NIS E DI+SFL + A + + ++
Sbjct: 114 LESVEHEKSIQEFRKRYNVQKPKVNISHAEAEEDIDSFLESMDQSAPPSITEDKGENYIS 173
Query: 237 SKHNEEAVTPNNNTNTLKE 293
S H+ ++ N++ N + E
Sbjct: 174 SNHSSMHISRNDSRNYMSE 192
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 26.6 bits (56), Expect = 9.1
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Frame = +3
Query: 177 IKGKIADQEAFQTELRDWTKSKHNEEAVTPNNNTNTLKENADCNDLSLIPKNRN------ 338
++ +A++E TE+ + + A+ NTN E++ + S+ N
Sbjct: 74 LEKNLAEEEVRITEM---LTIQRQDIAIERRKNTNCFSESSQVDQYSVTETNLQYATNIG 130
Query: 339 -NLLRQLS--KALNSLKEDIG-----DPKAMYKELTFFQNRHKQLLNQKTISPKQVSNNR 494
NLL+QL + S KED+ D + K+L + K L+ +KT Q
Sbjct: 131 LNLLQQLRYLRLQLSEKEDLHKKLSVDNAHLIKQLDLLSSNMKTLMKEKTKVQGQRDLLE 190
Query: 495 KTINDMFKKLNMV 533
+ + + KKL V
Sbjct: 191 QRLQGLMKKLTEV 203
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +3
Query: 504 NDMFKKLNMVLLGQAGLADGSQHLNELYSFQEKLMNSRQKNIPPEQRKEIGQHYYSIFAA 683
ND+ K+L+ V+ Q S +++ Y +N + E+ + I +YY+
Sbjct: 1038 NDLHKRLSDVINSQQKFLSLSPQVSKDYYDVRSKLNDTAGSFSGEEMRAIDDNYYASRIK 1097
Query: 684 IPRDDY 701
DDY
Sbjct: 1098 QLEDDY 1103
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 192 ADQEAFQTELRDWTKSKHNEEAVTPNNNTNTLKENADCNDLSLIPKNRNNL 344
+D + F+ + DW ++ N A N N+ K N+ + +S + + NN+
Sbjct: 25 SDNDYFREDDIDWNQASSNYSARQENFGNNSSKINSVNDHVSTLSRYVNNI 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,060,258
Number of Sequences: 5004
Number of extensions: 99708
Number of successful extensions: 308
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 858281342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -