Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_E04_e29_10.seq
(1529 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.80
SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15) 32 1.4
SB_57852| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 30 4.3
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 30 4.3
SB_1033| Best HMM Match : Rpr2 (HMM E-Value=2.1) 30 4.3
SB_29145| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.6
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 30 5.6
SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32) 29 9.9
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 29 9.9
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 32.7 bits (71), Expect = 0.80
Identities = 42/213 (19%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Frame = +3
Query: 138 ISVECTDINSFLSIKGKIADQEAFQTELRDWTKSKHNEEAVTPNNNTNTLKENADCNDLS 317
IS E + L + ++A QE + R TK EE ++ T +E N L+
Sbjct: 916 ISEEKAIVAEQLESEREVA-QETEEMRQRLQTKKNELEELLSDLEGRITEEEE---NVLA 971
Query: 318 LIPKNRNNLLRQLSKALNSLKEDIGDPKAMYKELTFFQNRHKQLLNQKTI---SPKQVSN 488
L +++ LL+++ +SL+E+ + ++ E + + K+L ++ + ++S
Sbjct: 972 LT-EDKKKLLKEIQDLEDSLEEEESARQKLHLEKVSCEAKIKKLEEDLSLVEDTNSKISK 1030
Query: 489 NRKTINDMFKKLNMVLLGQAGLADGSQHLNELYSFQEKLMNSRQKNIPPEQRKEIGQHYY 668
+KT+ + +L+ L+ + + S+ L + + Q+ ++ ++ + E+R + Y
Sbjct: 1031 EKKTLEEKLNELDQALIDE---EEKSKGLAKQKAKQDAMIADLEERLKNEERPSVKALYT 1087
Query: 669 SIFA--AIPRDDYLELLKKFYQTSTSLKKKIKS 761
+ + R+ L LKK + ++ + + S
Sbjct: 1088 AAATDMRVKREAELVALKKSVEEESAKHENLMS 1120
>SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15)
Length = 1001
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/134 (20%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Frame = +3
Query: 147 ECTDINSFLSIKGKIADQ-EAFQTELRDWTKSKHNEEAVTPNNNTNTLKENADCNDLSLI 323
E + + + IK K+ ++ E Q +++ +S++ E+ V + +E D + L I
Sbjct: 643 ELAALTTDIEIKQKLIEELEIAQNKIQTM-RSQYEEKLVLLTHKIKETEEERD-HVLKNI 700
Query: 324 PKNRNNLLRQLSKALNSLKEDIGDPKAMYKELTFFQNRHKQLLNQKTISPKQVSNNRKTI 503
++ + +Q +K ++ +G + K++ + H QL+ +K + ++ +
Sbjct: 701 KEHDSESSKQAAKLKEEYEKKLGGLQTELKKVQAAKKEHAQLIREKANNDMRLKQLSNEV 760
Query: 504 NDMFKKLNMVLLGQ 545
+DM KK L+ Q
Sbjct: 761 SDM-KKTKARLMKQ 773
>SB_57852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 1077 KNGAGLGFSFFHRFGENFPFLXXIRATKXASWXNRNLSSSEGTQSDGXLXISDDKTLALP 898
+ GA + F+ E F + + ++ S R+ ++ + + + DDK LAL
Sbjct: 323 RKGAVISFTTIRLVREFFSLMTGMPGSEVYSQLKRDTATGQRAGHKFSVIVDDDKDLALT 382
Query: 897 YRHNXG 880
Y++ G
Sbjct: 383 YKYKTG 388
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 321 IPKNRNNLLRQLSKALNSLKEDI-GDPKAMYKELTFFQNRHKQLLNQ 458
I K R L ++ LKE+ G + +Y+EL ++++K+L+NQ
Sbjct: 1217 IAKKREQLAKEAGAKRQKLKEEYEGKLRVIYEELVSERSKNKELMNQ 1263
Score = 29.9 bits (64), Expect = 5.6
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Frame = +3
Query: 213 TELRDWTKSKHNEEAVTPNNNTNTLKENA--DCNDLSLIPKNRNNL---LRQLSKALNSL 377
TE++ ++KH E+ ++N N ENA D I K++N L L Q+S+ L
Sbjct: 953 TEVKRAMENKHFEQMEELHSNLNNALENAAKKDKDFEAIRKDKNQLESKLEQVSEELQLS 1012
Query: 378 KEDIGDPKAMYKELTFFQNRHKQLLNQKTISPKQVSNNRKTINDMFKKLNMVLLGQAGLA 557
K + + + ++L ++ H + ++ T V N + + K+ N +L +
Sbjct: 1013 KRRVMEIEIEKEQL---KSSHGEEISDLTKKIGSVQENEEGTLESVKESNSNILQE---- 1065
Query: 558 DGSQHLNELYSFQEKLMNSRQKNIPPEQRK 647
+ ++ ++FQ + + + + E RK
Sbjct: 1066 --KKKQSDEFNFQVAELKEKVQALEDENRK 1093
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +3
Query: 216 ELRDWTKSKHNEEAVTPNNNTNTLKENADCNDLSLIPKNRNNLLR--QLSKALNSLKEDI 389
E + +KH ++ P N NT K + D + KN+ + +R + +N DI
Sbjct: 827 EASEGVSNKHVPHSIEPTKNINTSKNDPDLSSKGSTSKNKISSVRNGDHDRLVNVSSTDI 886
Query: 390 GDPKAMYKELTFFQNRHKQL--LNQKTISPKQVSNNRK 497
D A+ KE + K++ N PK + +K
Sbjct: 887 KD-HAVEKETRRKVDSEKEVGKANHDDAKPKVIPKEKK 923
Score = 29.5 bits (63), Expect = 7.5
Identities = 38/175 (21%), Positives = 75/175 (42%)
Frame = +3
Query: 231 TKSKHNEEAVTPNNNTNTLKENADCNDLSLIPKNRNNLLRQLSKALNSLKEDIGDPKAMY 410
+K+ ++A N T++ K N D +IPK NN L+ + L K P+
Sbjct: 199 SKNGTTQQAAHTNVETSS-KNNTDTLHPKMIPKKDNNTLKHGHQVLRKTKNHTKTPQ--- 254
Query: 411 KELTFFQNRHKQLLNQKTISPKQVSNNRKTINDMFKKLNMVLLGQAGLADGSQHLNELYS 590
Q + K++ + K+ S S++ + + K+N L +A + L ++
Sbjct: 255 ------QAKKKRIKHTKSSSAD--SSDDYEVESIKVKVNFSELKKALQTFSPEILRKVKH 306
Query: 591 FQEKLMNSRQKNIPPEQRKEIGQHYYSIFAAIPRDDYLELLKKFYQTSTSLKKKI 755
EK+ R+K + +++K+ + ++ + E LK Q + +K KI
Sbjct: 307 DLEKM--EREKKLGEKEKKKKVKVLLDETISVQENALKEELKLLQQKANKVKGKI 359
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 216 ELRDWTKSKHNEEAVTPNNNTNTLKENADCNDLSLIPKNRNNLL 347
E D +KH ++ P N NT K + D + KN+ +LL
Sbjct: 933 EASDDVSNKHVPHSIEPTKNINTSKNDPDLSTKGSTTKNKVSLL 976
>SB_1033| Best HMM Match : Rpr2 (HMM E-Value=2.1)
Length = 303
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 1077 KNGAGLGFSFFHRFGENFPFLXXIRATKXASWXNRNLSSSEGTQSDGXLXISDDKTLALP 898
+ GA + F+ E F + + ++ S R+ ++ + + + DDK LAL
Sbjct: 218 RKGAVISFTTIRLVREFFSLMTGMPGSEVYSQLKRDTATGQRAGHKFSVIVDDDKDLALT 277
Query: 897 YRHNXG 880
Y++ G
Sbjct: 278 YKYKTG 283
>SB_29145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 29.9 bits (64), Expect = 5.6
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 453 NQKTISPKQVSNNRKTINDMFK-KLNMVLLGQAGLADGSQHLNELYSFQEKLMNSRQKNI 629
N+KTI+P++ + I DM K V QAG + NE + + +S Q I
Sbjct: 985 NRKTITPRESDGGLRDIQDMIKVHCKRVRELQAGQRYHNCLQNEAKQKADNIKHSEQALI 1044
Query: 630 PPEQRKEI 653
PE ++I
Sbjct: 1045 TPEALRDI 1052
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 29.9 bits (64), Expect = 5.6
Identities = 35/184 (19%), Positives = 71/184 (38%)
Frame = +3
Query: 201 EAFQTELRDWTKSKHNEEAVTPNNNTNTLKENADCNDLSLIPKNRNNLLRQLSKALNSLK 380
+ + E R W + N+E + A ND L + L +L ++++ K
Sbjct: 632 DCLREECRTWPNNLDNKEEAIRRMEEELQELKASNNDAQLAREAAKAELAKLEQSVSESK 691
Query: 381 EDIGDPKAMYKELTFFQNRHKQLLNQKTISPKQVSNNRKTINDMFKKLNMVLLGQAGLAD 560
+ A YK+ + + ++ + ++ N K + + V+ D
Sbjct: 692 REREAALAEYKKQAEEKKEQADKVEKRITTYEEAMNKIKDATGV-SDIKEVVQRFLSQGD 750
Query: 561 GSQHLNELYSFQEKLMNSRQKNIPPEQRKEIGQHYYSIFAAIPRDDYLELLKKFYQTSTS 740
+HL +L + EK++ R K + R E + YS A + +L++F Q
Sbjct: 751 TQKHLEQLKNNNEKML-VRLKEDKEKLRLEYEEMKYSGEARLSSGQ--RMLEEFQQRVDD 807
Query: 741 LKKK 752
+K+
Sbjct: 808 EEKR 811
>SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32)
Length = 584
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 252 EAVTPNNNTNTLKENADCNDLSLIPKNRNNLLRQLSKALNSLKEDIGDPKAMYKELT 422
EA+ N + T + A L + + R+ RQL++AL SLKE + KELT
Sbjct: 5 EALKVENKSLTDEIEAVQLQLQMACERRDQYNRQLNEALESLKEQRERNTVLQKELT 61
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 285 LKENADCNDLSLIPKNRNNLLRQLSKALNSLKEDIGDPKAMYKE 416
L+E DL+ +N NL + L LNS E+IG + M E
Sbjct: 188 LQEKQKSKDLASSEENLQNLNKTLQDELNSKNEEIGKLRPMLTE 231
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,677,024
Number of Sequences: 59808
Number of extensions: 775280
Number of successful extensions: 2125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2101
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4976817448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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