Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_E02_e13_10.seq
(1418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095446-1|AAH95446.1| 182|Homo sapiens vacuolar protein sortin... 308 3e-83
AF201946-1|AAF17238.1| 182|Homo sapiens DC7 protein protein. 308 3e-83
AF193795-1|AAF04596.1| 182|Homo sapiens vacuolar sorting protei... 308 3e-83
AF175264-1|AAF89952.1| 182|Homo sapiens vacuolar sorting protei... 308 3e-83
CR457182-1|CAG33463.1| 186|Homo sapiens VPS29 protein. 306 1e-82
BC000880-1|AAH00880.1| 186|Homo sapiens vacuolar protein sortin... 306 1e-82
AF168716-1|AAF87318.1| 186|Homo sapiens x 007 protein protein. 306 1e-82
CR533468-1|CAG38499.1| 182|Homo sapiens VPS29 protein. 305 2e-82
AF201936-1|AAF86872.1| 188|Homo sapiens DC15 protein. 305 2e-82
BC015095-1|AAH15095.1| 87|Homo sapiens VPS29 protein protein. 147 7e-35
>BC095446-1|AAH95446.1| 182|Homo sapiens vacuolar protein sorting
29 homolog (S. cerevisiae) protein.
Length = 182
Score = 308 bits (757), Expect = 3e-83
Identities = 141/181 (77%), Positives = 156/181 (86%)
Frame = +1
Query: 226 MLVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 405
MLVL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 406 GDFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFE 585
GDFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+FE
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120
Query: 586 AYEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYK 765
A+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYK
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 766 K 768
K
Sbjct: 181 K 181
>AF201946-1|AAF17238.1| 182|Homo sapiens DC7 protein protein.
Length = 182
Score = 308 bits (757), Expect = 3e-83
Identities = 141/181 (77%), Positives = 156/181 (86%)
Frame = +1
Query: 226 MLVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 405
MLVL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 406 GDFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFE 585
GDFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+FE
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120
Query: 586 AYEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYK 765
A+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYK
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 766 K 768
K
Sbjct: 181 K 181
>AF193795-1|AAF04596.1| 182|Homo sapiens vacuolar sorting protein
VPS29/PEP11 protein.
Length = 182
Score = 308 bits (757), Expect = 3e-83
Identities = 141/181 (77%), Positives = 156/181 (86%)
Frame = +1
Query: 226 MLVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 405
MLVL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 406 GDFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFE 585
GDFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+FE
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120
Query: 586 AYEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYK 765
A+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYK
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 766 K 768
K
Sbjct: 181 K 181
>AF175264-1|AAF89952.1| 182|Homo sapiens vacuolar sorting protein
29 protein.
Length = 182
Score = 308 bits (757), Expect = 3e-83
Identities = 141/181 (77%), Positives = 156/181 (86%)
Frame = +1
Query: 226 MLVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 405
MLVL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 406 GDFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFE 585
GDFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+FE
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120
Query: 586 AYEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYK 765
A+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYK
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 766 K 768
K
Sbjct: 181 K 181
>CR457182-1|CAG33463.1| 186|Homo sapiens VPS29 protein.
Length = 186
Score = 306 bits (752), Expect = 1e-82
Identities = 140/180 (77%), Positives = 155/180 (86%)
Frame = +1
Query: 229 LVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 408
LVL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VRG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 65
Query: 409 DFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFEA 588
DFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+FEA
Sbjct: 66 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEA 125
Query: 589 YEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYKK 768
+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYKK
Sbjct: 126 FEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 185
>BC000880-1|AAH00880.1| 186|Homo sapiens vacuolar protein sorting
29 homolog (S. cerevisiae) protein.
Length = 186
Score = 306 bits (752), Expect = 1e-82
Identities = 140/180 (77%), Positives = 155/180 (86%)
Frame = +1
Query: 229 LVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 408
LVL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VRG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 65
Query: 409 DFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFEA 588
DFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+FEA
Sbjct: 66 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEA 125
Query: 589 YEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYKK 768
+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYKK
Sbjct: 126 FEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 185
>AF168716-1|AAF87318.1| 186|Homo sapiens x 007 protein protein.
Length = 186
Score = 306 bits (752), Expect = 1e-82
Identities = 140/180 (77%), Positives = 155/180 (86%)
Frame = +1
Query: 229 LVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 408
LVL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VRG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 65
Query: 409 DFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFEA 588
DFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+FEA
Sbjct: 66 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEA 125
Query: 589 YEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYKK 768
+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYKK
Sbjct: 126 FEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 185
>CR533468-1|CAG38499.1| 182|Homo sapiens VPS29 protein.
Length = 182
Score = 305 bits (749), Expect = 2e-82
Identities = 140/181 (77%), Positives = 155/181 (85%)
Frame = +1
Query: 226 MLVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 405
MLVL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 406 GDFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFE 585
GDFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+ E
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKSE 120
Query: 586 AYEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYK 765
A+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYK
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180
Query: 766 K 768
K
Sbjct: 181 K 181
>AF201936-1|AAF86872.1| 188|Homo sapiens DC15 protein.
Length = 188
Score = 305 bits (749), Expect = 2e-82
Identities = 139/180 (77%), Positives = 155/180 (86%)
Frame = +1
Query: 229 LVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 408
+VL LGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VRG
Sbjct: 8 VVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 67
Query: 409 DFDENTTYPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFEA 588
DFDEN YPEQKV+TVGQF+IGLIHGH V+PWGD SLAL+QRQ DVDILISGHTH+FEA
Sbjct: 68 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEA 127
Query: 589 YEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEYKK 768
+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+STVVTYVY+L+GD VKVERIEYKK
Sbjct: 128 FEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 187
>BC015095-1|AAH15095.1| 87|Homo sapiens VPS29 protein protein.
Length = 87
Score = 147 bits (357), Expect = 7e-35
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +1
Query: 517 SLALVQRQLDVDILISGHTHRFEAYEHENKFYINPGSATGAYSPLYRSPTPSFVLMDIQS 696
SLAL+QRQ DVDILISGHTH+FEA+EHENKFYINPGSATGAY+ L + PSFVLMDIQ+
Sbjct: 3 SLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQA 62
Query: 697 STVVTYVYKLLGDXVKVERIEYKK 768
STVVTYVY+L+GD VKVERIEYKK
Sbjct: 63 STVVTYVYQLIGDDVKVERIEYKK 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,174,865
Number of Sequences: 237096
Number of extensions: 2705466
Number of successful extensions: 4786
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4786
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20772661786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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