Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_E02_e13_10.seq
         (1418 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47357-6|CAA87426.2|  187|Caenorhabditis elegans Hypothetical pr...   226   3e-59
Z47357-7|CAD90185.1|  191|Caenorhabditis elegans Hypothetical pr...   224   1e-58
Z50741-4|CAO82050.1|  190|Caenorhabditis elegans Hypothetical pr...    31   1.5  

>Z47357-6|CAA87426.2|  187|Caenorhabditis elegans Hypothetical
           protein ZK1128.8a protein.
          Length = 187

 Score =  226 bits (553), Expect = 3e-59
 Identities = 97/184 (52%), Positives = 140/184 (76%), Gaps = 2/184 (1%)
 Frame = +1

Query: 226 MLVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 405
           MLVL +GD ++PHR ++            ++QH+LCTGNLC++E+++YL+TL+SDVH+VR
Sbjct: 1   MLVLLIGDFNLPHRAANISPKFRKLLVPNKMQHVLCTGNLCSRETFDYLRTLSSDVHIVR 60

Query: 406 GDFDENTT-YPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRF 582
           G+FD+ T  YP+ KV+TVGQFRIG+ HGH ++PWGD+  L L+ RQLDVDIL++G+T+  
Sbjct: 61  GEFDDETLKYPDTKVVTVGQFRIGVCHGHQIIPWGDQRMLELLARQLDVDILVTGNTYEC 120

Query: 583 EAYEHENKFYINPGSATGAYSPLYRSP-TPSFVLMDIQSSTVVTYVYKLLGDXVKVERIE 759
            A E   +F+++PGSATG++S     P TPSF L+D+Q+  VVTY+Y+L+ D VKV+RI 
Sbjct: 121 SAVEKNGRFFVDPGSATGSFSVTKTEPTTPSFALLDVQADNVVTYLYRLIDDAVKVDRII 180

Query: 760 YKKA 771
           YKK+
Sbjct: 181 YKKS 184


>Z47357-7|CAD90185.1|  191|Caenorhabditis elegans Hypothetical
           protein ZK1128.8b protein.
          Length = 191

 Score =  224 bits (548), Expect = 1e-58
 Identities = 96/183 (52%), Positives = 139/183 (75%), Gaps = 2/183 (1%)
 Frame = +1

Query: 229 LVLXLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 408
           LVL +GD ++PHR ++            ++QH+LCTGNLC++E+++YL+TL+SDVH+VRG
Sbjct: 6   LVLLIGDFNLPHRAANISPKFRKLLVPNKMQHVLCTGNLCSRETFDYLRTLSSDVHIVRG 65

Query: 409 DFDENTT-YPEQKVITVGQFRIGLIHGHXVVPWGDEESLALVQRQLDVDILISGHTHRFE 585
           +FD+ T  YP+ KV+TVGQFRIG+ HGH ++PWGD+  L L+ RQLDVDIL++G+T+   
Sbjct: 66  EFDDETLKYPDTKVVTVGQFRIGVCHGHQIIPWGDQRMLELLARQLDVDILVTGNTYECS 125

Query: 586 AYEHENKFYINPGSATGAYSPLYRSP-TPSFVLMDIQSSTVVTYVYKLLGDXVKVERIEY 762
           A E   +F+++PGSATG++S     P TPSF L+D+Q+  VVTY+Y+L+ D VKV+RI Y
Sbjct: 126 AVEKNGRFFVDPGSATGSFSVTKTEPTTPSFALLDVQADNVVTYLYRLIDDAVKVDRIIY 185

Query: 763 KKA 771
           KK+
Sbjct: 186 KKS 188


>Z50741-4|CAO82050.1|  190|Caenorhabditis elegans Hypothetical
           protein F55G7.4 protein.
          Length = 190

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = -1

Query: 602 FSCS*ASNL*VWPDIRISTSSCLCTSARDSSSPQGTTX*P*MRPIRNCPT 453
           FS + ++NL + P IR STSSCL +S ++S +       P +   RN PT
Sbjct: 118 FSKTMSTNLHLSPKIRRSTSSCLRSSKKESLNKNLEKYKPDINTERNNPT 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,295,700
Number of Sequences: 27780
Number of extensions: 407965
Number of successful extensions: 806
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4037791064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)