Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_E01_e5_09.seq
(1554 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL513304-1|CAH73405.1| 739|Homo sapiens adenosine deaminase, RN... 32 6.5
AL392083-3|CAH72171.1| 739|Homo sapiens adenosine deaminase, RN... 32 6.5
AF034837-1|AAF78094.1| 739|Homo sapiens double-stranded RNA spe... 32 6.5
Z95976-1|CAB09392.1| 699|Homo sapiens RNA editing deaminase 1 p... 31 8.6
X99383-1|CAA67762.1| 701|Homo sapiens double-stranded RNA-speci... 31 8.6
X99227-1|CAA67611.1| 741|Homo sapiens double-stranded RNA-speci... 31 8.6
U82121-1|AAB61687.1| 741|Homo sapiens double stranded RNA-speci... 31 8.6
U82120-1|AAB61686.1| 701|Homo sapiens double stranded RNA-speci... 31 8.6
U76422-1|AAC51242.1| 714|Homo sapiens dsRNA adenosine deaminase... 31 8.6
U76421-1|AAC51241.1| 741|Homo sapiens dsRNA adenosine deaminase... 31 8.6
U76420-1|AAC51240.1| 701|Homo sapiens dsRNA adenosine deaminase... 31 8.6
BC065545-1|AAH65545.1| 701|Homo sapiens adenosine deaminase, RN... 31 8.6
AY135659-1|AAN10291.1| 729|Homo sapiens adenosine deaminase pro... 31 8.6
AL163301-2|CAB90493.1| 741|Homo sapiens human dsRNA adenosine d... 31 8.6
AF533142-1|AAM97654.1| 701|Homo sapiens adenosine deaminase ADA... 31 8.6
AF525422-1|AAM83100.1| 729|Homo sapiens adenosine deaminase ADA... 31 8.6
AF001042-1|AAB58300.1| 741|Homo sapiens RNA editase protein. 31 8.6
AB194373-1|BAE16329.1| 674|Homo sapiens adenosine deaminase act... 31 8.6
AB194372-1|BAE16328.1| 701|Homo sapiens adenosine deaminase act... 31 8.6
AB194371-1|BAE16327.1| 701|Homo sapiens adenosine deaminase act... 31 8.6
AB194370-1|BAE16326.1| 701|Homo sapiens adenosine deaminase act... 31 8.6
>AL513304-1|CAH73405.1| 739|Homo sapiens adenosine deaminase,
RNA-specific, B2 (RED2 homolog rat) protein.
Length = 739
Score = 31.9 bits (69), Expect = 6.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV V + ++G+ + G G K A+ AAE ALR V
Sbjct: 150 PVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAELALRSFV 190
>AL392083-3|CAH72171.1| 739|Homo sapiens adenosine deaminase,
RNA-specific, B2 (RED2 homolog rat) protein.
Length = 739
Score = 31.9 bits (69), Expect = 6.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV V + ++G+ + G G K A+ AAE ALR V
Sbjct: 150 PVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAELALRSFV 190
>AF034837-1|AAF78094.1| 739|Homo sapiens double-stranded RNA
specific adenosine deaminase protein.
Length = 739
Score = 31.9 bits (69), Expect = 6.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV V + ++G+ + G G K A+ AAE ALR V
Sbjct: 150 PVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAELALRSFV 190
>Z95976-1|CAB09392.1| 699|Homo sapiens RNA editing deaminase 1
protein.
Length = 699
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>X99383-1|CAA67762.1| 701|Homo sapiens double-stranded RNA-specific
editase protein.
Length = 701
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>X99227-1|CAA67611.1| 741|Homo sapiens double-stranded RNA-specific
editase protein.
Length = 741
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U82121-1|AAB61687.1| 741|Homo sapiens double stranded RNA-specific
editase 1 hRED1-L protein.
Length = 741
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U82120-1|AAB61686.1| 701|Homo sapiens double stranded RNA-specific
editase 1 hRED1-S protein.
Length = 701
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U76422-1|AAC51242.1| 714|Homo sapiens dsRNA adenosine deaminase
DRADA2c protein.
Length = 714
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U76421-1|AAC51241.1| 741|Homo sapiens dsRNA adenosine deaminase
DRADA2b protein.
Length = 741
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U76420-1|AAC51240.1| 701|Homo sapiens dsRNA adenosine deaminase
DRADA2a protein.
Length = 701
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>BC065545-1|AAH65545.1| 701|Homo sapiens adenosine deaminase,
RNA-specific, B1 (RED1 homolog rat) protein.
Length = 701
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AY135659-1|AAN10291.1| 729|Homo sapiens adenosine deaminase
protein.
Length = 729
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 131 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 171
>AL163301-2|CAB90493.1| 741|Homo sapiens human dsRNA adenosine
deaminase DRADA2b, EC 3.5. protein.
Length = 741
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AF533142-1|AAM97654.1| 701|Homo sapiens adenosine deaminase ADAR2
variant protein.
Length = 701
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AF525422-1|AAM83100.1| 729|Homo sapiens adenosine deaminase ADAR2
protein.
Length = 729
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 131 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 171
>AF001042-1|AAB58300.1| 741|Homo sapiens RNA editase protein.
Length = 741
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AB194373-1|BAE16329.1| 674|Homo sapiens adenosine deaminase acting
on RNA type2d protein.
Length = 674
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AB194372-1|BAE16328.1| 701|Homo sapiens adenosine deaminase acting
on RNA type2a protein.
Length = 701
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AB194371-1|BAE16327.1| 701|Homo sapiens adenosine deaminase acting
on RNA type2a protein.
Length = 701
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AB194370-1|BAE16326.1| 701|Homo sapiens adenosine deaminase acting
on RNA type2a protein.
Length = 701
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 130 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,134,176
Number of Sequences: 237096
Number of extensions: 1200265
Number of successful extensions: 2474
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2473
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23239072816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -