Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_E01_e5_09.seq
         (1554 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    34   0.003

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 34.3 bits (75), Expect = 0.003
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 109 RVRPMLSPVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 252
           +V     P       + + IDG  Y G G  K  A+++AAE ALR++V
Sbjct: 51  KVVDQTGPTHAPIFTIAVQIDGQTYEGKGRTKKMAKHAAAELALRNIV 98



 Score = 25.0 bits (52), Expect = 1.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 661 PTFTVALDLDGNTYIWXKXXVXSXARXXAARVXCYELFKSLN 786
           P FT+A+ +DG TY   K      A+  AA +    + +  N
Sbjct: 62  PIFTIAVQIDGQTY-EGKGRTKKMAKHAAAELALRNIVQFRN 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,145
Number of Sequences: 438
Number of extensions: 1978
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54549000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)