Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_D12_e92_08.seq
         (1516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6CAD9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    41   0.074

>UniRef50_Q6CAD9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
            Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 1130

 Score = 41.1 bits (92), Expect = 0.074
 Identities = 27/90 (30%), Positives = 27/90 (30%)
 Frame = -3

Query: 1484 GGPNGXXXPXGVXXPXRFXAGXXXGFXAPXLXXPPVXRPXXFPXXXXRXXPPGWXGAQKX 1305
            GGP     P G        A    GF  P    P    P           PPGW G    
Sbjct: 691  GGPGNPQPPPG-------WAPGQPGFQGPPPGHPAFQGPPPGHPAFQGPPPPGWHGPPGH 743

Query: 1304 GXPPPXGXGXTXGXXXXPXGPXXGNGPAFW 1215
            G PPP   G   G    P G   G  P  W
Sbjct: 744  GPPPPGWQGPPPGWHGPPPGQFHGPPPPGW 773


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,041,640,924
Number of Sequences: 1657284
Number of extensions: 15874145
Number of successful extensions: 26186
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 23684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25895
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 161311790000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)