Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_D11_e84_07.seq
         (1507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    59   1e-10
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    29   0.12 
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      25   1.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   1.9  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 58.8 bits (136), Expect = 1e-10
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = -1

Query: 883 GNIPVFAPANITTEVKSVEMHHEALQEAVPG 791
           G + VFAPANITTEVKSVEMHHEAL EAVPG
Sbjct: 26  GMVVVFAPANITTEVKSVEMHHEALPEAVPG 56


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = -2

Query: 612 QPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHPSVVS 433
           +P  PA  P+   K   V+ + +R       ++MP ++ W  P    + P+ NS+P++V+
Sbjct: 39  RPLIPATAPQKPDKWEDVMADIER-------VIMPGVTHWHSPRFHAYFPTANSYPAIVA 91


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 401 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVN 300
           RC    ++ GS+ WQ  +SC    +  E  ++V+
Sbjct: 68  RCASYIQVSGSKIWQMERSCMCCQESGEREASVS 101


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 819 TRLYKKLYPVTMLV 778
           T+LY+KLYPV M +
Sbjct: 28  TKLYQKLYPVLMFL 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,651
Number of Sequences: 336
Number of extensions: 6166
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45169425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)