Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_D11_e84_07.seq
(1507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 262 7e-70
03_01_0547 + 4093196-4093657,4094267-4095148 262 7e-70
03_01_0544 + 4082528-4082989,4083585-4084466 262 7e-70
03_01_0543 + 4076981-4077442,4078145-4079026 262 7e-70
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 66 7e-11
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 64 2e-10
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 64 2e-10
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 56 1e-07
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 50 5e-06
02_04_0462 + 23131433-23132836 42 0.001
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 38 0.027
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 30 5.5
05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152 29 9.6
05_01_0296 - 2303344-2303395,2303732-2304180,2304287-2304355,230... 29 9.6
02_03_0125 + 15529391-15529495,15530066-15530226,15530315-155305... 29 9.6
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 262 bits (641), Expect = 7e-70
Identities = 116/167 (69%), Positives = 143/167 (85%)
Frame = -1
Query: 883 GNIPVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 704
G + F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P
Sbjct: 263 GMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPA 322
Query: 703 RGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSI 524
+ AA FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +
Sbjct: 323 KEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFL 382
Query: 523 KSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 383
K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 383 KNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 262 bits (641), Expect = 7e-70
Identities = 116/167 (69%), Positives = 143/167 (85%)
Frame = -1
Query: 883 GNIPVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 704
G + F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P
Sbjct: 263 GMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPA 322
Query: 703 RGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSI 524
+ AA FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +
Sbjct: 323 KEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFL 382
Query: 523 KSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 383
K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 383 KNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 262 bits (641), Expect = 7e-70
Identities = 116/167 (69%), Positives = 143/167 (85%)
Frame = -1
Query: 883 GNIPVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 704
G + F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P
Sbjct: 263 GMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPA 322
Query: 703 RGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSI 524
+ AA FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +
Sbjct: 323 KEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFL 382
Query: 523 KSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 383
K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 383 KNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 262 bits (641), Expect = 7e-70
Identities = 116/167 (69%), Positives = 143/167 (85%)
Frame = -1
Query: 883 GNIPVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 704
G + F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P
Sbjct: 263 GMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPA 322
Query: 703 RGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSI 524
+ AA FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +
Sbjct: 323 KEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFL 382
Query: 523 KSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 383
K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 383 KNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 66.1 bits (154), Expect = 7e-11
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Frame = -1
Query: 883 GNIPVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 704
G+ + P +V + + ++ A P +NV + + +++ G+V S NP
Sbjct: 255 GDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVLS-SIGNPV 313
Query: 703 RGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPK 530
+F AQ+ +L + GY VL H+ C+ ++ E++D + K + K
Sbjct: 314 GAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPKKK 373
Query: 529 S-------IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 425
+K+G + + + +C+E+F +FP LGRF +R
Sbjct: 374 KPKRKPLFVKNGAVVVCRIQVNNLICIENFSDFPQLGRFTLR 415
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 64.5 bits (150), Expect = 2e-10
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Frame = -1
Query: 889 QLGNIPVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 710
++G+ + +P VKS+E + A GDNV +++ + +L + G N
Sbjct: 508 RIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILCN 563
Query: 709 P--PRGAADFTA-QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTED 539
P P ++F +V+VL+ I GY H A + +I +D+ GK ++
Sbjct: 564 PGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKT 622
Query: 538 NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 392
P+ +KS A+V + P+CV+ F + LGR +R T+AVGV+
Sbjct: 623 APRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 64.5 bits (150), Expect = 2e-10
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Frame = -1
Query: 889 QLGNIPVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 710
++G+ + +P VKS+E + A GDNV +++ + +L + G N
Sbjct: 508 RIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILCN 563
Query: 709 P--PRGAADFTA-QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTED 539
P P ++F +V+VL+ I GY H A + +I +D+ GK ++
Sbjct: 564 PGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKT 622
Query: 538 NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 392
P+ +KS A+V + P+CV+ F + LGR +R T+AVGV+
Sbjct: 623 APRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 55.6 bits (128), Expect = 1e-07
Identities = 37/153 (24%), Positives = 71/153 (46%)
Frame = -1
Query: 841 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 662
VK++E + + A GDNV ++ + + G V + P A+ +++VL+
Sbjct: 508 VKTIERNSSSCNLARAGDNVAIGLQGIDPSHIMPGGVICHP-DYPVSVASCLELKILVLD 566
Query: 661 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 482
I G ++ +I ++++TGK+++ P+ + S A++ + K
Sbjct: 567 ITVPILVGL---------QVSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEK 617
Query: 481 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 383
+CVE F LGR +R T+AVG++ V
Sbjct: 618 EVCVEEFSNLKALGRVFLRSQGNTIAVGIVSRV 650
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 50.0 bits (114), Expect = 5e-06
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = -1
Query: 883 GNIPVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 704
G+ + P +V SV + ++ A PG+NV + + ++ G+V K NP
Sbjct: 210 GDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPV 268
Query: 703 RGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPK 530
++F AQ+ +L + GY VL H+ C+ E+ E++D + K + K
Sbjct: 269 SAISEFRAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRRKEGDIKKK 328
Query: 529 SIK 521
K
Sbjct: 329 KSK 331
>02_04_0462 + 23131433-23132836
Length = 467
Score = 42.3 bits (95), Expect = 0.001
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 3/156 (1%)
Frame = -1
Query: 841 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 662
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 661 HPGQIS---NGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLV 491
G+ S GY P T + +I D + K GD + +
Sbjct: 384 EGGRHSPFFPGYRPQFYMRTTDVTGNVTKIMNDKD--------EEAKMCMPGDRVKMVVE 435
Query: 490 PSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 383
+P+ E RFA+R+ +TV GVI +
Sbjct: 436 LIQPVACEQGM------RFAIREGGKTVGAGVINTI 465
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 37.5 bits (83), Expect = 0.027
Identities = 39/157 (24%), Positives = 64/157 (40%)
Frame = -1
Query: 853 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQV 674
+ T V VEM + L GDNVG ++ + +++RG V K + F A++
Sbjct: 311 LKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEI 368
Query: 673 IVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNL 494
VL +T L ++ + A++ KV D + + GD
Sbjct: 369 YVLTK--DEGGRHTAFLSNYSPQFYFRTADVTGKV------VLPDGVEMVMPGDNVTAGF 420
Query: 493 VPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 383
P+ +E P RFA+R+ +TV GV+ V
Sbjct: 421 ELISPVPLE------PGQRFALREGGRTVGAGVVSKV 451
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 446 GWEFL-EGLHTQGLGGNQVDNGGITRFNGF 532
G E+L EG + GGN +DN G+T +N F
Sbjct: 365 GMEYLFEGCSSITEGGNSMDNSGVTEYNLF 394
>05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152
Length = 265
Score = 29.1 bits (62), Expect = 9.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 510 PPLSTWFPPSPCVW 469
PP+S+ PPSPC W
Sbjct: 175 PPISSGMPPSPCEW 188
>05_01_0296 -
2303344-2303395,2303732-2304180,2304287-2304355,
2304539-2306546,2311181-2311425
Length = 940
Score = 29.1 bits (62), Expect = 9.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 65 AGNSARGIIGGYLYSMNLHFSLQL*QNI*GVCITLYKLKIMLQYKPCKKYR 217
+G++ +G +S+N+ +SL L Q I +C+ L L + K +KY+
Sbjct: 193 SGDNEKGDHQNIRWSLNIFYSLVLAQGIIFICMLLNPLTVYFVLKVRRKYK 243
>02_03_0125 +
15529391-15529495,15530066-15530226,15530315-15530570,
15531360-15531374,15533608-15533967
Length = 298
Score = 29.1 bits (62), Expect = 9.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 407 RRRCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVNSS 294
RRRC+K L+ R W++ C G+ V + N++
Sbjct: 102 RRRCSKSVALRDLRLWEASTMCALLSVGERVRRSSNTA 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,269,509
Number of Sequences: 37544
Number of extensions: 711515
Number of successful extensions: 1979
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4826476928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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