Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_D10_e76_08.seq
(1521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 48 5e-04
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 42 0.032
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 42 0.056
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 41 0.074
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 41 0.074
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 40 0.23
UniRef50_Q04117 Cluster: Salivary proline-rich protein; n=5; Rat... 38 0.52
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 38 0.52
UniRef50_Q2U6I0 Cluster: Predicted protein; n=1; Aspergillus ory... 37 1.2
UniRef50_UPI00015056F9 Cluster: DNA binding / ligand-dependent n... 37 1.6
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 37 1.6
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 36 2.8
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 36 2.8
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 36 2.8
UniRef50_A0R658 Cluster: Putative uncharacterized protein; n=1; ... 36 3.7
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 36 3.7
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 36 3.7
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 36 3.7
UniRef50_Q63BY7 Cluster: Group-specific protein; n=9; Bacteria|R... 35 6.5
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 6.5
UniRef50_A7T1V7 Cluster: Predicted protein; n=1; Nematostella ve... 35 6.5
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 34 8.5
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 34 8.5
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 48.4 bits (110), Expect = 5e-04
Identities = 38/103 (36%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = +1
Query: 49 GXKKPRTRSRXGXXRYAQGKNLVVXXQTGXRHNFGLYXYLP*XIXIISLPXGEV-KALYA 225
G KP G G++LV QTG L LP + I + P E A
Sbjct: 176 GFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKT--LAYVLPAVVHINNQPRLERGDGPIA 233
Query: 226 XVLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARD 354
VLAPTREL E G + R T GGAPK +QARD
Sbjct: 234 LVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARD 276
Score = 41.5 bits (93), Expect = 0.056
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +3
Query: 357 ERGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
ERG A GRL D E+GTT+ +R T EADR D G EP
Sbjct: 278 ERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEP 323
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 42.3 bits (95), Expect = 0.032
Identities = 35/103 (33%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Frame = +1
Query: 49 GXKKPRTRSRXGXXRYAQGKNLVVXXQTGXRHNFGLYXYLP*XIXIISL-PXGEVKALYA 225
G K P G G N V +TG G LP + I + P A
Sbjct: 300 GYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYI--LPAIVHINNQQPLQRGDGPIA 357
Query: 226 XVLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARD 354
VLAPTREL E G R T GGAPK Q RD
Sbjct: 358 LVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRD 400
Score = 37.5 bits (83), Expect = 0.92
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +3
Query: 357 ERGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
+RG A GRL D G+TN +R T EADR D G EP
Sbjct: 402 QRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEP 447
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 41.5 bits (93), Expect = 0.056
Identities = 22/45 (48%), Positives = 23/45 (51%)
Frame = +3
Query: 360 RGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
RG A GRL D E GTTN +R T EADR D G EP
Sbjct: 223 RGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEP 267
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 41.1 bits (92), Expect = 0.074
Identities = 22/46 (47%), Positives = 24/46 (52%)
Frame = +3
Query: 357 ERGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
ERG A GRL D E+G TN +R T EADR D G EP
Sbjct: 243 ERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEP 288
Score = 39.5 bits (88), Expect = 0.23
Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Frame = +1
Query: 49 GXKKPRTRSRXGXXRYAQGKNLVVXXQTGXRHNFGLYXYLP*XIXII---SLPXGEVKAL 219
G KP G G+++V QTG L P + I L G+
Sbjct: 141 GFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKT--LAYIAPALVHITHQDQLRRGD--GP 196
Query: 220 YAXVLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARD 354
A VLAPTREL + G NA T GGAPK Q RD
Sbjct: 197 IALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRD 241
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 41.1 bits (92), Expect = 0.074
Identities = 22/46 (47%), Positives = 24/46 (52%)
Frame = +3
Query: 357 ERGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
ERG A GRL D E+G TN +R T EADR D G EP
Sbjct: 352 ERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEP 397
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 39.5 bits (88), Expect = 0.23
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +1
Query: 49 GXKKPRTRSRXGXXRYAQGKNLVVXXQTGXRHNFGLYXYLP*XIXIISLPXGEV-KALYA 225
G +P G +G++++ QTG L LP + + + P E
Sbjct: 270 GFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKT--LSYLLPGLVHVGAQPRLEQGDGPIV 327
Query: 226 XVLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARD 354
+LAPTREL + G R T +GGAPK Q RD
Sbjct: 328 LILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRD 370
Score = 37.9 bits (84), Expect = 0.69
Identities = 21/45 (46%), Positives = 22/45 (48%)
Frame = +3
Query: 360 RGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
RG A GRL D E G TN +R T EADR D G EP
Sbjct: 373 RGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEP 417
>UniRef50_Q04117 Cluster: Salivary proline-rich protein; n=5; Rattus
norvegicus|Rep: Salivary proline-rich protein - Rattus
norvegicus (Rat)
Length = 202
Score = 38.3 bits (85), Expect = 0.52
Identities = 29/127 (22%), Positives = 36/127 (28%), Gaps = 2/127 (1%)
Frame = +3
Query: 525 PPNGXPXXXPXQRPXRXNGNAPXGXPTXR--RAXTKXGXTANQPXXXXXXQTXRPXXXXP 698
PP G P P Q P + G P G P + + + G Q +P P
Sbjct: 51 PPQGGPQQKPPQ-PGKPQGPTPPGGPQQKPPQPGNQQGPPPPGGPQQKPPQPEKPQGPPP 109
Query: 699 XXXTXPXAPPXXXQGHPXEPXAXXXKXXGXXXTXSPXXXXTEKXTXXXXGPPXGPPXXXN 878
P Q P P K P + G P GPP
Sbjct: 110 PGGPQQRPPQPGNQQGPPPPGGPQQKPPQPEKPQGPPPPGGPQQKPPQPGKPQGPPPPGG 169
Query: 879 PXXKXPQ 899
P + PQ
Sbjct: 170 PQQRPPQ 176
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 38.3 bits (85), Expect = 0.52
Identities = 21/45 (46%), Positives = 22/45 (48%)
Frame = +3
Query: 360 RGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
RG A GRL D E G TN +R T EADR D G EP
Sbjct: 256 RGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEP 300
Score = 35.9 bits (79), Expect = 2.8
Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Frame = +1
Query: 49 GXKKPRTRSRXGXXRYAQGKNLVVXXQTGXRHNFGLYXYLP*XIXIISLPX-GEVKALYA 225
G P G G+++V +TG L LP + I + P
Sbjct: 153 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKT--LTYCLPSIVHINAQPLLAPGDGPIV 210
Query: 226 XVLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARD 354
VLAPTREL + G R T +GG PK Q RD
Sbjct: 211 LVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRD 253
>UniRef50_Q2U6I0 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 551
Score = 37.1 bits (82), Expect = 1.2
Identities = 35/124 (28%), Positives = 40/124 (32%), Gaps = 1/124 (0%)
Frame = +3
Query: 498 TXEXHRPNTPPNGXPXXXPXQRPXRXNGNAPXGXP-TXRRAXTKXGXTANQPXXXXXXQT 674
T E +P +PP G P P + +P G P T + T QP T
Sbjct: 333 TPEGTKPASPP-GTPVQPPPSEHPTTHPASPPGTPGTTKTKPASPPGTPVQPPPSEQPPT 391
Query: 675 XRPXXXXPXXXTXPXAPPXXXQGHPXEPXAXXXKXXGXXXTXSPXXXXTEKXTXXXXGPP 854
P P T P PP Q P G T P TE T G P
Sbjct: 392 STPEETKPAPST-PVQPPTSEQ-----PTTKPIPPIGIT-TKPPTETPTETPTETPTGSP 444
Query: 855 XGPP 866
GPP
Sbjct: 445 PGPP 448
>UniRef50_UPI00015056F9 Cluster: DNA binding / ligand-dependent
nuclear receptor; n=1; Arabidopsis thaliana|Rep: DNA
binding / ligand-dependent nuclear receptor -
Arabidopsis thaliana
Length = 359
Score = 36.7 bits (81), Expect = 1.6
Identities = 32/159 (20%), Positives = 46/159 (28%)
Frame = +1
Query: 442 PXXXXXKPTARXTRAASHXQXKXTDXTLPXTAXPXAXRXKGXKEXTETXPRXXQRXDGPX 621
P KP +R S K + + + P + + P ++ P
Sbjct: 77 PHPPSPKPPTPSSRPPSPLSPKKSPPSPKPSPPPRTPKKSPPPPKPSSPPPIPKKSPPPP 136
Query: 622 QKXXTRPTNPXXXXXXKPNDPXXXXPKXXPXPXPXXQXTRXTPTNPXPXXXKXXAXXKHX 801
+ PT KP+ P K P P P + P+ P P K
Sbjct: 137 KPSSPPPTPKKSPPPPKPSSPPPSPKKSPPPPKPSPSPPK--PSTPPPTPKKSPPSPPKP 194
Query: 802 ARRXXXXKNXXXXXXAHPXAPPXXXTPPXKXXKXXXXPK 918
+ K P +PP TPP K PK
Sbjct: 195 SSPPPSPKKSPPPPKPSP-SPPKPSTPPPTPKKSPPPPK 232
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 36.7 bits (81), Expect = 1.6
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +3
Query: 360 RGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
RG A GRL D E TN +R T EADR D G EP
Sbjct: 332 RGVEILIACPGRLIDFLESSVTNLRRVTYLVLDEADRMLDMGFEP 376
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 35.9 bits (79), Expect = 2.8
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = +3
Query: 381 AXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEP 494
A GRL D E+G TN R T EADR D G EP
Sbjct: 117 ACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEP 154
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 35.9 bits (79), Expect = 2.8
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 357 ERGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEPXTXE-XHRPNTPPN 533
ERG A GRL D E+G + Q EADR D G EP + + + PP
Sbjct: 272 ERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPP 331
Query: 534 G 536
G
Sbjct: 332 G 332
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 35.9 bits (79), Expect = 2.8
Identities = 27/85 (31%), Positives = 34/85 (40%)
Frame = +1
Query: 100 QGKNLVVXXQTGXRHNFGLYXYLP*XIXIISLPXGEVKALYAXVLAPTRELXXXXXXXXX 279
Q +++V +TG G LP + I L VLAPTREL
Sbjct: 186 QCQDVVAIAKTGSGKTLGYL--LPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAV 243
Query: 280 ELGXXPNARXTXAHGGAPKREQARD 354
+ G T +GGAPK Q RD
Sbjct: 244 KFGRSSRISSTCLYGGAPKGPQLRD 268
>UniRef50_A0R658 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium smegmatis str. MC2 155|Rep: Putative
uncharacterized protein - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 368
Score = 35.5 bits (78), Expect = 3.7
Identities = 37/140 (26%), Positives = 49/140 (35%), Gaps = 1/140 (0%)
Frame = +2
Query: 452 PXXSRPQGGHGQRATNKXKXPTXHSPXRXXPXRTAXKAXKKXRKRXXGXPNXTTGPNKKX 631
P + P+G HGQR + + P H+ P + R G P GP +
Sbjct: 51 PQVAGPRGTHGQRPSPRPGGP-GHT--GQAPTHGHSRPPMHTGTRHPGKP-PRPGP-PRP 105
Query: 632 XHGQPTR-XXXXPPNXTTRXQXPXKXXXTQXPXXXXPGXPXRTXGPKXXKXXRXXNTEPX 808
HG PT+ PP T P + T+ PG P P T+P
Sbjct: 106 GHGHPTKTGHPDPPQQTDPSHTPTRPSHTR--PTRPPGWPGWPGWPPHHGHWPTKPTKPT 163
Query: 809 EXTHXKTHXXXTRPTXRPPP 868
+ T T PT RP P
Sbjct: 164 KPTEPTEPTEPTEPT-RPTP 182
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 35.5 bits (78), Expect = 3.7
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +1
Query: 49 GXKKPRTRSRXGXXRYAQGKNLVVXXQTGXRHNFGLYXYLP*XIXIISLPX-GEVKALYA 225
G +P G +G++L+ +TG LP + + + P
Sbjct: 115 GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTIAYL--LPAIVHVNAQPILDHGDGPIV 172
Query: 226 XVLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARD 354
VLAPTREL + G + T +GG PK Q RD
Sbjct: 173 LVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRD 215
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 35.5 bits (78), Expect = 3.7
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 178 IXIISLPXGEVKALYAXVLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARD 354
I I++ + + YA +LAPTREL LG R T GG +QARD
Sbjct: 137 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARD 195
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 35.5 bits (78), Expect = 3.7
Identities = 28/85 (32%), Positives = 33/85 (38%)
Frame = +1
Query: 100 QGKNLVVXXQTGXRHNFGLYXYLP*XIXIISLPXGEVKALYAXVLAPTRELXXXXXXXXX 279
QGK++V +TG I I+ + YA VLAPTREL
Sbjct: 134 QGKDIVGIAETGSGKTAAF------AIPILQTLYTAAQPYYALVLAPTRELAFQIKETFD 187
Query: 280 ELGXXPNARXTXAHGGAPKREQARD 354
LG R GG EQARD
Sbjct: 188 ALGSSMGLRSVCIIGGMSMMEQARD 212
>UniRef50_Q63BY7 Cluster: Group-specific protein; n=9; Bacteria|Rep:
Group-specific protein - Bacillus cereus (strain ZK /
E33L)
Length = 928
Score = 34.7 bits (76), Expect = 6.5
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +3
Query: 411 EKGTTNXQRRTXXXXXEADRKXDTGSEPXTXEXHRPNTPPNGXPXXXPXQRPXRXNGNAP 590
E G N ++ +K DTG++P T +P+T P+ P P +P P
Sbjct: 152 EPGKANDNKQQPNVQEGDGQKTDTGTKPDTNPDTKPDTKPDTNPDTKPDTKPDTNPDTKP 211
Query: 591 XGXP 602
P
Sbjct: 212 DTKP 215
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 34.7 bits (76), Expect = 6.5
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +1
Query: 229 VLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARDRK 360
VLAPTREL + G R +GGAPK EQ K
Sbjct: 104 VLAPTRELAQQTAKVFDDAGEASGVRCVCVYGGAPKYEQKAQMK 147
>UniRef50_A7T1V7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 2040
Score = 34.7 bits (76), Expect = 6.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 480 TGSEPXTXEXHRPNTPPNGXPXXXPXQRPXRXNGNAPXGXPTXRR 614
+G++P + +P PP P P +P GN P P R+
Sbjct: 666 SGNQPGSQPGSQPGNPPGSQPGSQPGSQPESQPGNQPGSQPNGRK 710
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 34.3 bits (75), Expect = 8.5
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +3
Query: 357 ERGXXXFXAXXGRLXDPXEKGTTNXQRRTXXXXXEADRKXDTGSEPXTXEXHRPNT-PPN 533
ERG A GRL D E+G EADR D G EP +T PP
Sbjct: 314 ERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPK 373
Query: 534 G 536
G
Sbjct: 374 G 374
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 34.3 bits (75), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 229 VLAPTRELXXXXXXXXXELGXXPNARXTXAHGGAPKREQARDRK 360
V++PTREL L N + +GGAPK EQAR K
Sbjct: 241 VVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARAAK 284
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.315 0.133 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,765,836
Number of Sequences: 1657284
Number of extensions: 7892098
Number of successful extensions: 11780
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11379
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 162118348950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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