Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_D05_e36_07.seq
         (1588 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VC13 Cluster: CG10845-PA; n=2; Drosophila melanogaste...    38   0.73 

>UniRef50_Q9VC13 Cluster: CG10845-PA; n=2; Drosophila
           melanogaster|Rep: CG10845-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 463

 Score = 37.9 bits (84), Expect = 0.73
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +2

Query: 140 VTRILPKKTLDASKKEQIVNDSLPNGGGDVPVKPPPSPSLTDNALLPDVIA*TLAYRER 316
           +TR+L  + +    +  I+N + P  G D PV P P+PS   NA LPD +   L  +ER
Sbjct: 218 LTRLL-NQLMGNGSRTVIINYADPPEGKDDPVTPAPTPSSNSNASLPDEVWRRLLRQER 275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,410,042
Number of Sequences: 1657284
Number of extensions: 4415936
Number of successful extensions: 17085
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 16273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17025
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 170990497400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)