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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_D04_e28_08.seq
         (1544 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    55   2e-07
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    54   3e-07
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    51   3e-06
DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      50   4e-06
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    50   4e-06
Z69902-7|CAA93769.1|  618|Caenorhabditis elegans Hypothetical pr...    48   1e-05
AB023424-1|BAA82800.1|  618|Caenorhabditis elegans kel-1 protein.      48   1e-05
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    46   9e-05
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    46   9e-05
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    45   2e-04
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    44   2e-04
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       44   2e-04
Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical pr...    42   0.001
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      40   0.005
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      40   0.005
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    40   0.005
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    37   0.044
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    36   0.077
Z66512-2|CAA91323.1|  387|Caenorhabditis elegans Hypothetical pr...    32   1.3  
AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical...    31   2.2  
AC025723-13|AAK29939.1|  286|Caenorhabditis elegans Hypothetical...    31   2.2  
U56965-9|AAB52662.2|  265|Caenorhabditis elegans Hypothetical pr...    29   8.8  

>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 54.8 bits (126), Expect = 2e-07
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = +3

Query: 270 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMNPTQHPI--VFLKDVSHS 443
           F+ L S+  L DV L  E R L AHK++L+   PYF+ MF ++  +  +  + ++D+++ 
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100

Query: 444 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
            +  LL F Y GE+ +    + S +  A   Q+
Sbjct: 101 TVDALLSFAYTGELRITTSNVQSIMLGANFFQM 133


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = +3

Query: 276 GLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMNPTQHPI--VFLKDVSHSAL 449
           GL +R  L DVTL    + + AH++VLS CSPYF  MF     +  +  + ++++    L
Sbjct: 48  GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107

Query: 450 RDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
             L++F Y G + +    +   +  A  LQ+
Sbjct: 108 EALIEFCYTGAIAIDDSNVQDILPAACLLQI 138


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
 Frame = +3

Query: 270 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMNPTQHPIVFL----KDVS 437
           F+ L S+  L DV L  E R L AHK++L+   PYF+ MF ++  +  +  +     D++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100

Query: 438 HSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
           +  +  LL F Y GE+ +    + S +  A   Q+
Sbjct: 101 YETVDALLSFAYTGELRITTSNVQSIMLGANFFQM 135


>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
 Frame = +3

Query: 294 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQF 467
           +L DV L   G +++AH+ +L+  SPYF+ MF   M   +   + L+D+   ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168

Query: 468 MYQGEVNVKQEELASFISTAEQLQV 542
           +Y  ++ +    +   I TA  LQ+
Sbjct: 169 IYTDKIAITMNNVHQLIFTATVLQM 193


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
 Frame = +3

Query: 294 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQF 467
           +L DV L   G +++AH+ +L+  SPYF+ MF   M   +   + L+D+   ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168

Query: 468 MYQGEVNVKQEELASFISTAEQLQV 542
           +Y  ++ +    +   I TA  LQ+
Sbjct: 169 IYTDKIAITMNNVHQLIFTATVLQM 193


>Z69902-7|CAA93769.1|  618|Caenorhabditis elegans Hypothetical
           protein C47D12.7 protein.
          Length = 618

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
 Frame = +3

Query: 333 LQAHKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 506
           + AH+++LS  S YF+ MF   +  +   I+ +K+V    L  L+ +MY G + + ++ +
Sbjct: 82  IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141

Query: 507 ASFISTAEQLQV 542
            + ++TA  LQ+
Sbjct: 142 QTILATASLLQL 153


>AB023424-1|BAA82800.1|  618|Caenorhabditis elegans kel-1 protein.
          Length = 618

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
 Frame = +3

Query: 333 LQAHKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 506
           + AH+++LS  S YF+ MF   +  +   I+ +K+V    L  L+ +MY G + + ++ +
Sbjct: 82  IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141

Query: 507 ASFISTAEQLQV 542
            + ++TA  LQ+
Sbjct: 142 QTILATASLLQL 153


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 45.6 bits (103), Expect = 9e-05
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +3

Query: 252 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMN--PTQHPIVFL 425
           ++++     L   G   D TL  E R L+AHK +L+  SP F  M   +    Q+    L
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 246

Query: 426 KDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 551
           +D+ +  ++ +L ++Y G            ++ AE+  + GL
Sbjct: 247 RDIDYEVVQAILYYIYTGTCTNMGGNALDILAAAERFALPGL 288


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 45.6 bits (103), Expect = 9e-05
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +3

Query: 252 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMN--PTQHPIVFL 425
           ++++     L   G   D TL  E R L+AHK +L+  SP F  M   +    Q+    L
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 253

Query: 426 KDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 551
           +D+ +  ++ +L ++Y G            ++ AE+  + GL
Sbjct: 254 RDIDYEVVQAILYYIYTGTCTNMGGNALDILAAAERFALPGL 295


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = +3

Query: 297 LVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMNPTQHPIVFLK--DVSHSALRDLLQFM 470
           L DV L  EG+ +   K VL+  S +FQ+MF  N  +     +K  DV+HS   DLL  +
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVI 218

Query: 471 YQGEVNVKQEELASFISTAEQLQV 542
           Y   + +    ++  +  +++  V
Sbjct: 219 YPTHMLINSSNVSHLLKLSDRFAV 242


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
 Frame = +3

Query: 195 VAAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 374
           V  I  ++E       N    +   +  L S+  L D  +   G++++AHK VL+  SP 
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225

Query: 375 FQEMFXMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTA 527
           F  M     T   +  ++++ D+ +  + +++ ++Y G  N    ++A+ +  A
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIA 279


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
 Frame = +3

Query: 195 VAAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 374
           V  I  ++E       N    +   +  L S+  L D  +   G++++AHK VL+  SP 
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225

Query: 375 FQEMFXMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTA 527
           F  M     T   +  ++++ D+ +  + +++ ++Y G  N    ++A+ +  A
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIA 279


>Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical
           protein F38H4.7 protein.
          Length = 602

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
 Frame = +3

Query: 333 LQAHKLVLSVCSPYFQEMF--XMNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKQ 497
           + AHK VLS+ S  F  MF   + P  T+  + + L DV  SA   LL+F+Y  EV ++ 
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263

Query: 498 EELASFISTAEQLQVKGL 551
           E + + + TA++  V  +
Sbjct: 264 ESVMTTLYTAKKYAVPAM 281


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
 Frame = +3

Query: 204 IMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVLSV 362
           ++AS E   LC   F  +     H L  R       G   DV +  + +   AH+ +L+ 
Sbjct: 3   LVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAA 62

Query: 363 CSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
            SPYF  +F         + +   S       L +MY G V + +  ++  +  A    +
Sbjct: 63  HSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLI 122


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
 Frame = +3

Query: 204 IMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVLSV 362
           ++AS E   LC   F  +     H L  R       G   DV +  + +   AH+ +L+ 
Sbjct: 3   LVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAA 62

Query: 363 CSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
            SPYF  +F         + +   S       L +MY G V + +  ++  +  A    +
Sbjct: 63  HSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLI 122


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
 Frame = +3

Query: 204 IMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVLSV 362
           ++AS E   LC   F  +     H L  R       G   DV +  + +   AH+ +L+ 
Sbjct: 3   LVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAA 62

Query: 363 CSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
            SPYF  +F         + +   S       L +MY G V + +  ++  +  A    +
Sbjct: 63  HSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLI 122


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 36.7 bits (81), Expect = 0.044
 Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
 Frame = +3

Query: 303 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFX---MNPTQHPIVFLKDVSHSALRDLLQFMY 473
           D  +    + ++AH+ +L   SP F+ MF    M   Q   + ++D  + ++R +++FMY
Sbjct: 220 DCVIHVGNKHIKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMY 279

Query: 474 QG--EVNVKQEELASFISTAEQLQV 542
            G  E    Q  +   ++ A++ +V
Sbjct: 280 TGATESLESQGNIDEILAIADKYEV 304


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 35.9 bits (79), Expect = 0.077
 Identities = 18/80 (22%), Positives = 36/80 (45%)
 Frame = +3

Query: 303 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGE 482
           DV +  +      H +V+   S  F E F      +    + D    ++R +  +MY GE
Sbjct: 36  DVKIQLKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGE 95

Query: 483 VNVKQEELASFISTAEQLQV 542
           +++ +  +A  ++ A  L+V
Sbjct: 96  IDIPETTIADVLAVASYLRV 115


>Z66512-2|CAA91323.1|  387|Caenorhabditis elegans Hypothetical
           protein F52H3.3 protein.
          Length = 387

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +3

Query: 294 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMN--PTQHPIVFLKDVSHSALRDLLQF 467
           ++ D+TL    + L  +K  L++ SP F  MF  N    +   V L+DV     R+LL  
Sbjct: 226 NICDMTLVINKQKLFVNKAYLALYSPVFYAMFFSNFQEREKTQVELEDVVLEEFRELLHV 285

Query: 468 MYQGEVNVKQEELASFISTAEQLQVK 545
           +Y     +  + +   +   ++ +++
Sbjct: 286 IYPCHKPITSDNVEYLLELGDKYEIQ 311


>AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical
           protein Y62E10A.16 protein.
          Length = 496

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
 Frame = +3

Query: 270 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMNPTQ------HPIVFLKD 431
           +  L  +G+  D+ LAA GR  + HKL L   + +F+ MF    T+         +   +
Sbjct: 60  YQKLFLQGENSDIVLAACGREWRVHKLYLKQ-TKFFESMFDGLWTESNSGRVQMEITDPN 118

Query: 432 VSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNE 569
           +    L  +L  +Y  E+ +  +++   ++ A  + +  +T   +E
Sbjct: 119 IDADGLNSVLGSLYHNEIEIDLDKIEGTVAAASYIVLDSVTDRCSE 164


>AC025723-13|AAK29939.1|  286|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.11 protein.
          Length = 286

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 22/93 (23%), Positives = 39/93 (41%)
 Frame = +3

Query: 264 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSHS 443
           AG    + +  + D  +  E R     K  L+  S  FQ +F   P   P + ++DVS  
Sbjct: 2   AGMDFSMPKELVFDAIVVVEERKFHVGKQYLATHSRVFQSLFA-TPGD-PEITIQDVSSE 59

Query: 444 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
                L+FMY     +  + + S ++ + +  V
Sbjct: 60  DFLKFLEFMYHNTDQITAQNVESLLTVSARFGV 92


>U56965-9|AAB52662.2|  265|Caenorhabditis elegans Hypothetical
           protein C15H9.2 protein.
          Length = 265

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = +3

Query: 294 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF-----XMNPTQHPIVFLKDVSHSALRDL 458
           D  +V L  E      H  VLS+ S YF+ +F       +    PI  LK +S  + R+L
Sbjct: 123 DSSNVVLKVEDEEFHVHTFVLSMASQYFKVLFNGSFIESSDLTKPIE-LKGISSCSFRNL 181

Query: 459 LQFMY 473
           L  +Y
Sbjct: 182 LNCIY 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,913,778
Number of Sequences: 27780
Number of extensions: 510586
Number of successful extensions: 1045
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4452547242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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